Transcript Dmel\up-RP

General Information
Symbol	Dmel\up-RP	Species	D. melanogaster
Annotation Symbol	CG7107-RP	FlyBase ID	FBtr0310137
Feature type	mRNA	Associated gene	Dmel\up

Evidence Rank	Strongly Supported	Length (nt)	1519
Evidence Score	11

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 55 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	15807 34179 58707 79428 99664 214313.5 CK01.21B.C12 CK01.84C.H10 CK01.118D.B2 Dmel_neb_002569_0949_3714 EK067147 EK136314 EK149122 EK165563 EK209313 EK221916 EK291063 EP11758 FGC026H04 GH03102 GH03165 GH11704 GH14942 HL02644 HL03106 HL03415 HL03534 HL08064 IP02216 IP14747 IP17689 LP22994 RC0-DA0001-120700-011-E05 RC0-DA0001-120700-016-H02 RC0-DA0001-130700-116-E08 RC0-DL0001-140700-019-E12 RC0-DL0001-140700-111-A04 RC0-DL0001-140700-124-H10 RE19619
End(s) extend beyond the annotated transcript, internally consistent	30590 58434 100802 105510 159919 183104 276963 CK01.13D.E7 Dmel_neb_011283_0103_2787 EK177801 EK223123 EK230511 EK262957 EK288031 EK304222 RH16230
Sequence
	ATCGTCAGTTTGGTTAGTCGAACCGCAGCATTCGCTCCTACGACGTCAGC TGCTCGGACTTCAATTCAATTTGTTTTTCTCCCTAAGTTTTTTCAACCCT AAACCGTAGCCATGTCCGACGATGAAGAGTACACCTCCGAGGAGGAGGAG GTTGTCGAGGAAACCCGCGAGGAGACAAAACCACCTCAGACACCAGCCGA AGGAGAGGGCGATCCAGAGTTCATCAAGCGTCAGGACCAGAAGCGCTCCG ACCTCGATGATCAGCTGAAAGAATACATCACCGAGTGGCGCAAACAGAGA TCCAAGGAGGAGGATGAGCTGAAGAAGCTGAAGGAGAAGCAGGCCAAGCG CAAGGTCACCCGCGCCGAGGAGGAGCAAAAGATGGCCCAGCGCAAGAAGG AGGAGGAGGAGCGCCGTGTCCGTGAGGCTGAGGAGAAGAAGCAGCGCGAG ATCGAGGAGAAGCGCATGCGTCTCGAGGAGGCCGAGAAGAAGCGCCAGGC TATGCTGCAGGCCATGAAGGACAAGGACAAGAAGGGCCCCAACTTCACCA TTGCCAAGAAGGATGCAGGCGTGTTGGGACTCTCGTCCGCCGCCATGGAA CGCAACAAGACTAAGGAACAGTTGGAGGAGGAGAAGAAGATCTCGCTGTC GTTCCGCATCAAGCCCTTGGCCATCGAAGGATTCGGCGAGGCTAAGCTGC GCGAGAAGGCCCAGGAGCTGTGGGAGCTCATTGTCAAATTGGAAACTGAG AAGTATGACTTGGAAGAAAGGCAGAAACGTCAGGACTACGATTTGAAAGA GTTGAAGGAAAGACAGAAGCAACAGCTCAGGCACAAAGCCTTGAAGAAGG GTCTCGACCCGGAAGCTTTGACTGGCAAATACCCGCCCAAGATCCAAGTC GCCTCCAAGTATGAGCGACGTGTGGACACCCGCTCTTATGACGACAAGAA GAAGCTCTTCGAGGGTGGCTGGGATGAGATCTCCAAGGACTCGAACGAGA AGATCTGGAACGAGAAGAAGGAGCAATACACCGGCCGTCAAAAATCCAAA CTGCCAAAGTGGTTCGGCGAGCGACCAGGCAAGAAGGCCGGTGAGCCCGA GACACCCGAGGGCGAGGAGGACGCCAAGGCCGATGAGGACATCGTCGAGG ATGATGAGGAGGTCGAGGAGGAGGTCGTCGAGGAGGAAGATGAGGAGGCC GAGGAGGATGAGGAGGAGGAGGAGGAGGAAGAGGAGGAAGAAGAGGAAGA GGAGGAGGAAGAGGAGGAGGAGGAAGAAGAGGAAGAGGAGGAGGAGGAAT AGACCAATCCACACTCTGGGCCCGCCCTCGCGCACCACTTTCCTTCACCA CTTTTCGTAAAAACAAACACTACATTTAAATACCAAAGCCAAACAATTTT AATAAAAGTAAATGAATGAACTAAGTAGTTAACAACTTGCTATTCAAAAT CAAAAACTCAACATCTTTTTTATTGAATCGAGAAATGTAAGATTTCTTTT AAAATAAAACATCAAAACC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) up-RA FBtr0073851 1522 up-RB FBtr0073852 1498 up-RD FBtr0073853 1684 up-RE FBtr0100561 1453 up-RG FBtr0100563 1522 up-RH FBtr0301919 1453 up-RI FBtr0301920 1522 up-RJ FBtr0301921 1498 up-RK FBtr0301922 1519 up-RL FBtr0301923 1495 up-RM FBtr0308233 1425 up-RN FBtr0308234 1620 up-RO FBtr0310136 1522 up-RQ FBtr0310138 1495 up-RR FBtr0340617 1546 up-RS FBtr0340618 1696
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) up-PP FBpp0301822 396
Derived from OTHER transcripts	Name FlyBase ID Length (aa) up-PA FBpp0073682 397 up-PB FBpp0073683 389 up-PD FBpp0073684 306 up-PE FBpp0100013 374 up-PG FBpp0100015 396 up-PH FBpp0291133 374 up-PI FBpp0291134 397 up-PJ FBpp0291135 389 up-PK FBpp0291136 396 up-PL FBpp0291137 388 up-PM FBpp0300553 373 up-PN FBpp0300554 394 up-PO FBpp0301821 397 up-PQ FBpp0301823 388 up-PR FBpp0309481 388 up-PS FBpp0309482 388
Comments
	FBrf0191175 refers to this transcript as troponin T-2 Transcript is larval-specific: FBrf0191175. Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001272594
Synonyms
	up-RP
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2005, Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. [FBrf0182792] FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]