Transcript Dmel\CG11360-RC

General Information
Symbol	Dmel\CG11360-RC	Species	D. melanogaster
Annotation Symbol	CG11360-RC	FlyBase ID	FBtr0310539
Feature type	mRNA	Associated gene	Dmel\CG11360

Evidence Rank	Strongly Supported	Length (nt)	6932
Evidence Score	15

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 84 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	IP11818 IP11918 MIP32608
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	17292 31319 36663 55157 57213 58838 60535 61655 69455 73539 76573 78711 102523 103170 108373 124064 144563 145834 146807 174759 193283 275439 CK01.23B.H9 CK01.29B.C6 CK01.33A.D3 CK01.41C.G8 CK01.54B.C10 CK01.82A.G5 CK01.84C.G6 CK01.86C.C5 CK01.90C.G6 CK01.90D.B6 CK01.91A.C10 CK01.91A.C12 CK01.98B.C8 CK01.110B.H11 CK01.113D.H6 CK01.123A.D8 CK01.144C.H1 CK01.169A.D12 CK01.169C.D12 Dmel_dig_011841_0713_1596 EC253630 EK006303 EK021329 EK035460 EK039431 EK044206 EK044543 EK062708 EK064727 EK067045 EK070459 EK071139 EK071243 EK076044 EK093748 EK099432 EK103448 EK104046 EK136304 EK140231 EK147564 EK174211 EK177847 EK182836 EK196814 EK203023 EK206850 EK208542 EK226052 EK234933 EK237507 EK246742 EK249517 EK250243 EK296431 EK303152 EP05648 EP15533 IP11618
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	ATTCTTTATCGTGTGTTGAATGCCGTTCATCTAAGGAATCGCTTTCCATA TACTAATTAGCCTGCGTACCTCCACCCTCAACCCTCCACCATCTTTCCAT ACAAAAGGCGTGACGAAATACTGCCGGAATGTGTACCTGGGGATTCAAGT TTTCGAGTGTACACACAAAATCCAGAAAGGGCTGAACAACGAATATATTG TTACCAACATTCGACTTGGGTCTGGCCAAATGTGGCTAAACGAGGAAGTC TTTTAGTTTAAAGCTGGATAAAACCTTGACATGACCGCACACATAACAAA GGAATTAAGTGGATTCATAGAGTGAGTTCAAGTTCTCTATCTAGTTCCAT ATCATCCGTCAATTTCTCATCGGCTTCCGTTCCACCGAGCTCCTCCTCAT TGCGCGAGATTGCTGTTGCACCGGTTTTCATTACCATGGCGGCTCAGGTC ACACCAAAGATCTCTACATGCATTAACTCGAAAGGGTCTATCCAGAAAAA AAATCAAGCACAACATCACGATATGTCTGAACAATCCAAAGTCAATGAAT CAACGCTACCACTATCCGACGATCCGAGGACACTGCAATTGGCATTGGAA CTATCATTGGTCGGATTTAACGACAATCAAAATTGCTATGCGCAGCCTGC TCAACCGCTACCAATGCCCCTAAGTGCACGAAGTGACTTTGAAATAGGGA CCATCAACAGCACGCTACCAATTCCATCGGCACCGAACTGTCTTCTATTA CCGAATGCCGGCGCCGTCAGTTCAGAAGATCGATCTAAGAAGTCGCAAAA TATGACCGAATGTGTTCCAGTCCCCAGTTCTGAACATGTAGCAGAAATAG TGGGCAGGCAGGGGTGCAAAATTAAAGCTTTGAGAGCCAAAACCAACACT TACATTAAGACACCAGTTCGAGGAGAGGAGCCTGTGTTCGTTGTGACTGG TCGAAAGGAAGATGTAAACAAGGCTAAACGAGAAATACTTTCTGCTGCCG ACCACTTTAGCTTAATTCGCGCATCACGTAAGCCTGTAAGCGATAGTCAG AACAATGGAATGGTAGGAAGTACGACTAGCTCCGGTGGTGGTGCAGTTCC CCGCATGTCAGGTCCCCCTTGTATGCCTGGACAGGTTACCATACAGGTAC GTGTACCTTATCGGGTAGTTGGACTCGTTGTTGGGCCAAAAGGTGCTACT ATCAAACATATTCAACAAGAGACGCAAACTTACATTGTGACACCATCGCG AGAAAAGGAACCAATTTTTGAAGTGACTGGCTTGCCAGATAACGTTGATA CTGCACGAAAGCAAATAGAAGCTCACATTGCCCTTAGAACTGGTAGCGGA TCTGGAAGTGGTGATGCTATTACTATGCAAAGTAGTGATTCGGTCGATAC TAAAGAATACGCGTCACTGCCTTCATTAACTCAAATTTTAAATGATGATT TAAATTCGGAAATTCTATCGTCCATATACAAAAATTCCGTTCCGTCTACG CAGGAGTATGCAAATAATTCAATGAAGACGGTTGTAAACGTAAGCAATTC AGTGAAACTTGTGCAAGGACATCATACTGGGAACTGTTTTCAAAAATCAG AGTTTGCTGAGATGGAAATGACAGCAAATATAACAGCAGCAGATATATTA GATAAACGTCTTCCTGGAAATGAAGTTTCTGTGCCTTTGGCCAAAGCTAA TGTTGCTAATATTGTTTTTCGCACTACGTCTAGTAAAACATTGTCTTTCT GTCCTCCCACATCTACATCGGCATCGTTTCATTCCAACTGTAATGCAAAT ATTTTAACAAGATCTTGTTCATCCGCTTCTTCTACCACTTCTACAAAAAG TACCAACAATAGCGCCAATACACCTCCAGAAATATTAAATATATGGAAAA GTATTAGTGATTCAATTGACGTTGACGAGGGTATAGGCGACTCTCCTAGT ATTTGGAACCAACCGGCAAATATCATACCCACAGCTCATTGCTCGCCCAC AATATCAATTAGTCCTACCGACTCACTGTTAGGTATGGGTGAACATTCTG CAAATCAACAAAATTTGAACCATGCTAAAGAGCCCATTATGCCTAATCTC CCGCAAAAGATAAAAGGCATTCAAGTGCAATCTAACGCAGACAATTTTTT AACTCATCGAGAATGCTTTGTATGTAATGAAAATACTGTTACCACTGCTT TGGTTCCGTGTGGTCACAATATGTTTTGTATGGAGTGCGCCAATCACATC TGTCTTTCTATGGATGCAGTTTGTCCGGTTTGTAATTCTATTGTTTACCA TGCAATGCGGATTTTAGGATAATTTGAATTTTTTTGTAAATGTATTTAAT ATTTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTCCGTG AAGTCTATTAACATTAGTTGAACGTTCAGGGATTAAAGGGAATTCTTAAT TTAAAATTAACTGCTGATTATAACGAACCAATATATTAAAAATTTCTTTT AATTTGGCTTCAGGGGACGAGACACAAATTTAATATTACGATTTTTTTGA ACGCGATGTCAACTTTATGTAACGTCTTCGTTCCTAGAAAACTGGTTGAC CCTACCTACTATTTATATTTAAAATTTCAAAATCGGAGTGCTTTTTTGGT TTCTTGCAAATAATTGTTTAGCGATTCTCTCTTGCAAATTTTTTATAACT GGCCAATACTTTGAGTTATAATAATGAATATTGTGCGGAAATAAGCTTTA ATGATACTGTCAGATGTTGCGGTTTAATAAGTGAAAATTTTCAAACTGTC TTTATAAACACAATAACAATTTATAAAAATGCTTATTGGGTGCACTAAAT GTTATTGTAAGCACTCAGTACTCCAAATATTGAATATTATAGTTTTTTTT TTTTAAACCGATCCATATTTACACAAAAAGTGAGTTTTGGCTAGTGGTCC GTTTTGATTTTCTAAAAAGTCTGTACTTCGGTTCGGTGCTGCTCCGAATT GGTTGACAGCCATAATAGGAACACCCTCTTAAACAGTTTACGAAGTTATA TTCAATGGCTATACAATGAGTATGACATTTTATTTTGAAGTTTGCAATGT TTTACAGAAATCTTCATCCCATGGGTGAACTGAAAAAGAAACTTTTGAAA ATACGAGAATAAAAAAGTTTTGTTGTTATACCCCGTTACTAGTAGAGGGA TTAGTATACGAGAATCGTTGAAAAGTATTTAACAGGCACATAGAAGCGTT TTGTATGTGTATATTAATTTTTATCAAGCCAACTCTAACGTCTACACAAC TCGCACATCTTTCATTTGAGTGGCCTGTCCGCATCGCTCAAATCGTTAGA TCGAACTTCCTGACTGCGAGATAGAAAACTTTTGGAGGCATATCAATATA AGTTGTCAAATAAAATTAAAATGAAAAAAAGTCTTTTTCAAAGTGTTGTC CTGATCATTCTATATGCGATAAATACCAAAATATGGGCGGATATGGCGAG ATTAAATATTAAAAAATATATACATACCTACTTATATATATACATATATA TAGGGTCGAAAATGTTTCCTTCTATATGCTACATACGTTTCAACGAATCT AGTATATCCTCTTCTTTTACGAATAGCGGATATAAAAATTTTTCTGTGTT TTAGGAAGTCATCTATAAAATAAATAAATATACTATCAAGTAATATTTAT ATAAGTAGAACAAACCCAAATTCTATTGAAGACCTTAGTGAAGAATTTTA ATAGTGTAAACAAAGAACTTAGATTATAAACATATATAATACCATATAGA AATACCTTATATTTTAATATTATTTTGAATAAAGAATAAATATTCGTATT TTATGTTATTTTGAGATTCGTGAATCTATATTCCTATTGGATTATAAAAA AGTAAATCAAAATAGTTTTTAATAGAAAATATATCGATTTTATTTTTACT ATTGGACGTTCGTCCAAAAAATGTTAAATGTGTAATAAATCTGACACAAT TTTTTAGTTAATTTCTATAATCTATATTCCAAAAATAATTCAAAGAATTT CCAAAGCCTCAGTTCTGGCTTAAATGTTTAACAGGGCTTAATATTGGCTA CATTTGTGGGAATCCAAAAATTTTGATTGCGGCGCACAAATTGCGAATTC GGTCAGAAAATAATTCATTGAAGCTAGCTAATTCATTTAAAACTTTGCGT GCGAAATTACATGTTATGTTAGCAAGTTATAAACACTCTATTCTTTTTCG TATATCTTCGTTGGAAAATAATAAAACTTGAACATAATGCTTCTTAAACC ATATTTATTTTGAACTTTTAGGAGCTTTCAGTGAAACTAGTTTCAGAATG ACTTTGTTGGCCTGTTTTTACATCCGTACATCGTAATCAATTACAAATTT TGGGTTCGATCAGTGTAATTCTTTCATGCTATGCAGTAATATCAGGCAAT GTTGAAATGTTTTAGCGTAATTTCTCTATTATTGACTTTTTGACTTTTTA TGTAAATGTGAGTCACTGAGCTTTTAATTGTTTAATAGATACGGAGAAAT CGATAGAACTTAGGCGAACTAACAAACTGCCGAAAAACATATAATAAATG ATTATTTACACCCAATTGTATTAGTTTTTGTGGTTAACGGATAAGTATGT ATGTATCTTATTTATTTTGAGTTTTTCATATAAATTGCCTTTTTATATCC GTCTGATTGTTGACGTTGTGAAATTCCTGATCTGTTATAAAACTTTAAAA ATTATACTGTGGAGTTTTGTGGAAAATAAGTGCGATAACTAATTCTTAAA TTTGTGACGCTTAGTTAAATTATTAACCATGGTCCCATTTAGAAAGTCTT GGAAGTCTCTTAGAAACTAAACTCTTTTGTTTACATGAAGCTGACTACTT TTTATTTACGTGTGTGAACAAACTTGTTCTTTAGACTTCTGTCAATTAAA CAATAAATTAGCATTTTTTTAATTACTTTTAAAAAATATTTTGATATAAT TTTAGGTTGCACAAATAATTAAGTCTCGATTTCATTGTTCCCCATGTGCA ATTTATAATCAGCCTATTACATAAGCCATCAAACCATTTATTTTTAAACA ACAAACATGATGAAAAATATATTGTATCTATAAAGTAAACTTTATGATAC TAATTCTCTGAAAAATTTAAAACGACTGATAAATTAGCATAAATATTAAG ATCGGACACAATATATATATACATAAATAATACAATAGATAAAGTAAAAA AATACAAAAGTTATATATACTTAAATCTACGATATATGACCCACATGTGA CAACTACCTTTAAAAACTTACTATTAATGTGAATAAAAAGACTTATATAT TATAGTCAATCATATTTAATATTTATAATACAATGTGAGTTGCGTGGAAT GTTATAAAACCCAACGTATTTCGGTTCGGTTCGAATTCAATTTTTAATAT TAGAATTTATGTTATACCTGTGTTTTAAAATTGTGTACTGTGCTTCAAGG TTAAATGAATCAATCGAAAATTTGTAATAGAGGCTGGCTTATATATATTT AAATGTATAAAATTTTAACATTAAATTTTTAAGGTCAAAATTTCAACGAG TGAGACTAAATAATTTATTTATCGCACAAAATAAACCTCTTACATTATTA ATGAGATATAACTAGAAAAATTTAATTTCATAAACAAATTTTTTAAAAAT ATATTGTGCATTTATACATACATACTATATAATTATATATACGCATTGCT TAGCCCTAAATAATATTCTTCGTAAGATAGCATAGTGTTGTAAGGTATTT AATGCGTTCTCATTCATATGACAAAGAATAAGTATATCTAAATAAAATAA ATAGAACATATTAATCTGTAAAATTCCATTACTTACGTTTTTTTTAAATA AAACGGTATCTATGGTGCTTATAACAAACTTGAACCATAATTATTGTTTG ATGAAAAAAGCTCCCATATAACATTGAAAATAAATTCATGGAAAATTAAT GATAGAAAATATGGATACCCCAACAGTCGAGTTCAGATTAAATTACGGAC TTCGGCAATTGAGACATTTTTATTTCTGAAAAATTATAAAATATAATATC TTCACAATTGCAATTTATAGTCAATATTTTAAATGTTTTTACCTGAAAAT GTTGCTTACATATTTTGTTACAAATTAAATTTCATTTTATCTTTTATTTT AGAATAGCGCAAAAAATTGTGCAACAATAAAATGTTAATTCCAATAAAGA CGTAAAGAATGTCTATTTAATTTATTTTTACCAAGTTTAACATCTTGGTG GCATATTTAATTCGACCGTTTGGTTCTGCAATAAATTCTATTGTGCTACG CTCAAATAAAAGATTGAATAGTCTTCAAAAAATATAATTTGTAATACGTA CAAACAAAAAGAGTAGTAAATATTTTTGTACACAGTTTGTAAGGACTTGC ATTTAACTTATAATTGGCGGCTAATACATTTACAACGAATGTTTTACTAA TTCAAACGAGGTATCACTTCAATTGGGAAACAAAAACAAATAATTTATGC AAAACAACAATAAGAATTAATATAGATGTAAAATATAAATACGTTCACCT AATTTAAAATTTATAATTATAAGTATAATACAAAAGTAATTAAAAGAGAA GTAAGCGCCCAATAACAAACATTAAACAACAAAAAACAAAATATTAACAA TATGAAAATATCCGTATTGTGTTCGACAAAAAGTAATATATCTTAAAGTA CATTTCATATATCGACTTAGATCGGCATTCCCATTTTACTGATTAGTATT CACATTAAAGGGCCAACTTAAGAACCGAGAGCCCTAAATTTATATGAGAA ATATTTATGGAAATATAAGTATATCAACTTATATACTAATGTATCACTAA ATGGTTATATAATAAATTTTTCGGAAATAAAT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) CG11360-RA FBtr0089091 5558 CG11360-RD FBtr0310540 3716 CG11360-RE FBtr0310541 4156
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) CG11360-PC FBpp0302676 628
Derived from OTHER transcripts	Name FlyBase ID Length (aa) CG11360-PA FBpp0088160 628 CG11360-PD FBpp0302677 628 CG11360-PE FBpp0302678 628
Comments
	Extended 3' UTR based on RNA-Seq and/or EST data. Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001272139
Synonyms
	CG11360-RC
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]