A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\slmb-RB

General Information
Symbol Dmel\slmb-RB Species D. melanogaster
Annotation Symbol CG3412-RB FlyBase ID FBtr0330049
Feature type mRNA Associated gene Dmel\slmb
Evidence Rank Strongly Supported Length (nt) 3492
Evidence Score 11
Map ( GBrowse ) GBrowse View Help detailed view FBtr0084012 FBtr0084033 FBtr0333931 FBtr0084032 FBtr0330049 FBtr0333930 FBtr0333929 FBtr0304713 FBtr0084030
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 114 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence
ACGATAGTGCACACTCATCTTTGGCTTTGTGGTTTCGCAGTCCGTATTTG
GGCGAGATCTGGTAAAAAAAAATAAAATTCTCCGTGTGAAAAGTGAGTGT
CCAGTAGTTGGCGTCATCTGAATAAGCAAAAACAAACAACGTGCAAGCCG
CCAGGAGCGGTGAGAATAATGACTTGCATACGACATTCGCTCAATTGGTG
AGGGACCTCGGCAAGTTGAGTTTGCCTTTGCCATCGCGTTCGCCTCGCCG
TTTTCGCGCATCCCGCCTGCGGTCCTACAGAAACCGAGACGAGCAAATTG
TAATTTTCCTTCGACCTAAAAATTATATGAAATCGCTGGCGAAAAGCGAT
TTGCGAGACGTGTTAACGAAAAATCAGCGAAAAACGCTACGTGGTGCGTG
AGTGCGAGTGCGACGGAAAACTCTGGCAGTGAGCGAGTGAGAGAGAAGCA
AACGACGAGCCAGTAAACTCTACAAACACACAAACAACACAATGATGAAA
ATGGAGACTGACAAAATAATGGACGAAACCAACTCCAATGCACAGGCCTT
CACAACCACTATGCTGTACGACCCGGTGCGCAAGAAAGACTCATCGCCCA
CCTACCAAACGGAGCGGGAACTCTGCTTTCAGTACTTCACCCAGTGGAGC
GAGTCGGGCCAGGTGGACTTTGTGGAGCACCTGCTGTCGCGCATGTGCCA
CTATCAACACGGACAGATCAATGCCTATCTCAAGCCGATGCTCCAGCGGG
ACTTTATCACATTGCTGCCAATCAAGGGTCTGGATCACATCGCAGAAAAC
ATTTTGTCGTACTTGGATGCCGAATCGCTCAAATCATCCGAGCTGGTCTG
CAAGGAATGGCTGCGCGTCATTTCCGAGGGCATGCTCTGGAAGAAGCTCA
TCGAACGCAAGGTGCGCACAGATTCCTTGTGGCGCGGACTGGCCGAGCGG
CGTAATTGGATGCAGTACCTCTTCAAGCCAAGACCGGGCCAGACTCAACG
GCCACACTCATTCCATCGCGAGTTGTTCCCCAAGATAATGAATGACATTG
ACAGCATAGAGAACAACTGGCGGACTGGCCGCCACATGCTGCGCCGCATC
AACTGCCGGTCCGAGAACTCGAAGGGTGTCTATTGTCTGCAGTACGATGA
CGGCAAGATTGTCTCCGGACTGAGGGACAACACCATCAAGATCTGGGATC
GCACGGATTTGCAGTGCGTTAAGACCCTAATGGGCCACACTGGATCGGTG
CTGTGCCTGCAGTATGACGACAAGGTGATCATCAGTGGCTCCAGCGACTC
CACCGTCCGCGTGTGGGACGTCAATACCGGCGAGATGGTCAACACCCTTA
TCCACCACTGCGAGGCGGTGCTGCACTTGCGCTTTAACAATGGCATGATG
GTTACCTGCTCCAAGGATCGCTCCATCGCCGTCTGGGACATGACCTCACC
CAGCGAGATTACGCTGCGGCGCGTCCTTGTCGGTCACCGTGCCGCCGTCA
ATGTGGTGGACTTTGATGAGAAGTACATCGTGTCCGCCAGCGGGGATCGC
ACCATCAAGGTCTGGTCCACATCTAGCTGTGAATTCGTGCGCACCTTGAA
TGGCCACAAGCGTGGCATCGCCTGCCTACAGTACAGAGATCGCCTGGTGG
TCAGCGGCAGCTCAGACAATTCCATAAGACTGTGGGACATTGAGTGCGGT
GCCTGTTTACGTGTCCTGGAGGGCCATGAGGAATTGGTTCGCTGCATTCG
TTTCGATACGAAACGAATCGTTAGCGGTGCCTACGATGGCAAGATCAAGG
TTTGGGATTTGGTCGCCGCCCTGGATCCAAGAGCAGCCTCCAATACTCTC
TGTCTGAATACCCTTGTGGAACATACTGGTCGCGTATTTCGTTTGCAATT
CGATGAGTTCCAGATTGTTAGCAGCTCGCATGATGATACAATTTTGATTT
GGGACTTTCTAAATTTCACACCCAATGAGAACAAGACCGGACGCACACCG
TCACCGGCCTTGATGGAACATTAACATTTTGTGCAACGGCAGCTGCGCGA
GTTACATCTACAATCCTCGAGCGAAGGAGAGGAGGACGACGATGCGGACG
AGGACGACGAGGATGATTTTGAGGAGGAGGATTCTAGAAACGATGCTGGC
GCGTTTATGGGGGGATATGTTAGGCACCGGGATGCTGGTGGTTCGGGATC
CGTCACCGGTTCCGGTTCGGATCCCGAATCGGATGACCTGGATTTCGATA
TAGATGTTGAGAATATTAATGATTATGATGAATAATGAGTGAATGGTCGT
TAACCAGCAGCATATACATACACACAGCAGACTTGTTTAAACAAAAAACG
ATGTTGAACCCAAGATACAGCGATCTCTAAGCGTCTATTTTACACACTAC
ATCCACACACACACACACACACGAAACACAACCACATAATATGAATTAAA
TGAAGTTATAAAAGCAAACAAACAATAAATGCAGGAGTATACCATTTATG
CAGATATTTCGCAAAACTGGCTGTTAGGTTTGTCGTGTACGAATGAAACA
AAAATGAAAGATGCAAAAACGGAAGGACAGAAAAAGTAAAATTATATATA
AGTTTATGTAGGCGCTGTAATACTAATCGAGGGTCAGTCTTTGAATCGCC
CTTCGGATCAGTGGATCGATCGATTGGGCGTTATTTTAAGTGTTTCTTTA
GCTCAAATACACAAGTATCGCGTTTAGGCAGCTGCCGCCTCAAGAATCGC
AGCAGGAATCTTCAGCGCGGCCAGAAGAATCAGTCTTTAGCATAAATGTT
AGTTAGAGTTGCATCATTGAAATTGGCAGAGCGCGTTGCCGTTTTGCACA
TTTGTAACCTATTTTACACGCCTTTTGCCTAATGTTTGTGTTAATTGTAA
AGTAAATCTAAGCCTAGTATCTTATTGGCAATTGTAATCTAAGTTAACCG
AAATACAAATATTTTAATTGAAAAGTTAATTGTGTAAAGAAGGACACGCA
GCAGTGTCTGCAACTGGAAGTTGCACATCTTTCGAGCGAAGATGAATTGA
AAATGGATCCATTGTACTGCAATATATAACCGATTCTTTGATTGATTGAT
CTATGCTAACTATAGGTTTTAGATATACCGATGTATGTAGAAAATAGCAA
ATTCCCAGGCAATTTCAACAATATAATTATATGTATGTATGCCGTTCGTT
GATTGTGATCAATGGATATTTTACTATGTGTATTGCTATTTGTAAGTTAA
GTTCCAATGCTATACTTGATCTGGATCACGATCACGCCGCTTCCGCGTTA
ACTAATGTATGTACATAACGTTTTACTTTAACAAAAGTGTTAACAAAAAT
ATGAACACATACTCCGGATTATGTAAAACTGTTAGTGGAAAGAGGGCAGC
ATGTTAAACGATGGCCGAGCAACTGCTAGTGCGCGAATGGGCTTAGTATA
TGTAACATAACTAGAAATAATAATAAATTGTGTATAAATGCT
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0084032
3492
FBtr0333931
2549
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0303082
597
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0083434
510
FBpp0306059
510
 
hide Comments
  • Stop-codon suppression (UAA) postulated; reflected in aa sequence of predicted polypeptide.
  • Transcript terminates at site supported by polyadenylated cDNA.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
hide Synonyms
slmb-RB
 
hide References ( 1 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]