Transcript Dmel\cpo-RN

General Information
Symbol	Dmel\cpo-RN	Species	D. melanogaster
Annotation Symbol	CG43738-RN	FlyBase ID	FBtr0330269
Feature type	mRNA	Associated gene	Dmel\cpo

Evidence Rank	Moderately Supported	Length (nt)	6133
Evidence Score	7

Map ( GBrowse )
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 60 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	10245 13229 38054 42667 54360 54479 63672 63679 64793 67530 71753 72855 102888 104225 119316 145939 159655 174400 190225 193642 214503.58 AT21223 CK01.15A.H12 CK01.31A.C7 CK01.146D.E10 Dmel_dig_008839_0598_0632 EK026912 EK110116 EK120649 EK179251 EK179916 EK187602 EK190229 EK190521 EK193049 EK195657 EK200447 EK201660 EK232905 EK239012 EK242626 EK248333 EK250608 EK275650 EK292347 HL02466 HL03492 RE38152 RP004027111 RP004102752 RP004134861 RP004156518 RP004266460 RP004269541 RP004391467 RP004433865 RP004451617 RP004535805
End(s) extend beyond the annotated transcript, internally consistent	276571 EK303647
Sequence
	CAGTTTTCAGTCTAATGTCAGGAACGCAGTTAGCTGCTCGTCTCGTGCGG AACTCTCAAAACTGGCCGTTTAATATAACTAATAATCTAGCCGAATAATA AACAAACTGTAACTACAACCGGTAGCAGTAAGCAGTAACTACACTACAGC AACTTAACAATCGGCCGTAACTCGAAATATTAAGCATCAAAGTGAGGATA TATCCCGAGAAAAAAAAACCGAAACAAAGAAAAACAACCCAAAAAGAAAA TTGTGATACAAATTATTTGATTTGCGAAACCCAACTGAACAGGCGAAAAA ACCCATAGATCCGTACATAAAACTACCAATATCGATATATACATATATAA ATATATGTGAAAATCCCCAGAGTATATATATCAAACGCGAATAAAATAAT TCAAAGTGGGCGGTGCAAAACAATTTGAAATGCTCTACAGCAACGACGGC TACAAAAATTTCAATTACAGTGCAGCTGAAAAGTAAAACTTCAGCAATCC AACAACCAACAGCCACACCAACGGAACGGCACAAAAACCAGTTAAATGTG ACTGGCAACAGCAGCAGTAATAATAACTACAAAAAGTTCAACTGACTCGT CAAAATAGCCAACTACCAGGACCTGTTGGGCAGCCATCATCAACTGCTCA TAGCCGCCACCGCCGCCGCAGCCGCTGCAGCAGCCGCCGAACCGCAACTG CAACTGCAACACCTGTTGCCAGCAGCGCCGACGACACCAGCAGTTATTAG CAATCCTATCAATTCGATTGGCCCGATCAATCAGATCAGCAGCAGCAGCC ATCCGAGCAACAACAACCAGCAGGCGGTGTTCGAAAAAGCCATCACCATT TCGTCGATTGCGATAAAACGCAGGCCGACGCTGCCGCAGACGCCAGCAAG TGCCCCACAGGTGTTGTCGCCGTCGCCCAAGCGCCAGTGTGCCGCCGCCG TCTCCGTGCTGCCGGTGACCGTTCCCGTGCCCGTTCCGGTGTCCGTACCG CTGCCCGTTTCCGTGCCCGTGCCCGTCTCGGTCAAAGGTCACCCGATCTC GCACACACACCAGATCGCCCACACACACCAGATCTCGCACTCGCATCCGA TCTCGCATCCGCACCACCACCAGCTGAGCTTCGCCCATCCCACGCAGTTC GCGGCCGCCGTTGCCGCCCACCACCAGCAGCAGCAGCAACAGCAGGCGCA GCAGCAGCAACAGGCCGTGCAACAGCAACAGCAGCAGGCCGTGCAGCAGC AACAAGTTGCCTACGCAGTTGCCGCCTCACCACAGTTGCAGCAACAGCAG CAGCAGCAGCAACACCGACTGGCCCAGTTCAACCAGGCGGCAGCAGCAGC TCTCCTGAATCAGCACTTGCAGCAGCAACACCAGGCGCAGCAGCAGCAAC ACCAAGCCCAGCAGCAATCTCTGGCCCACTACGGCGGCTATCAGCTGCAC AGATACGCACCGCAACAGCAGCAGCAGCACATCCTTCTGAGCAGCGGCAG CAGCAGCAGCAAGCACAACAGCAACAACAACAGCAACACCAGTGCAGGAG CAGCATCTGCGGCTGTGCCCATAGCAACATCCGTTGCTGCTGTCCCGACC ACCGGCGGCAGCTTGCCGGACAGTCCCGCCCACGAATCGCACTCGCACGA GTCCAACTCCGCGACCGCCTCCGCGCCGACCACGCCCTCGCCGGCAGGCA GCGTCACCAGCGCCGCCCCCACAGCAACAGCAACAGCCGCAGCAGCAGGA AGCGCGGCAGCAACAGCAGCAGCAACTGGCACACCAGCAACATCGGCCGT TAGCGACAGCAACAACAACCTGAACAGCAGCAGCAGCAGCAACAGCAACA GCAACGCCATAATGGAGAATCAGATGGCTCTGGCCCCGTTGGGACTTTCG CAGAGCATGGACTCCGTGAATACGGCCAGCAATGAGGAAGAGGTTCGCAC ACTTTTCGTCAGTGGTTTGCCCATGGACGCCAAGCCGCGCGAGCTCTATT TGTTATTCAGAGCCTATGAGGGCTATGAAGGATCTCTTTTGAAAGTAACT AGCAAAAATGGCAAAACTGCATCGCCCGTTGGCTTTGTGACATTCCATAC AAGAGCTGGAGCTGAGGCAGCTAAACAGGATCTGCAGGGTGTACGCTTCG ATCCCGATATGCCCCAAACAATTCGCTTGGAATTCGCCAAGAGTAACACG AAAGTGAGCAAACCCAAACCACAGCCCAATACAGCGACAACAGCCTCACA TCCTGCATTGATGCACCCACTCACTGGACATTTGGGCGGTCCCTTCTTTC CGGGCGGACCGGAGTTATGGCATCATCCGCTAGCCTATTCGGCAGCCGCC GCCGCCGAATTGCCAGGAGCTGCTGCACTGCAGCATGCAACGCTAGTGCA TCCGGCCCTGCATCCGCAGGTGCCAGTGCGCTCCTATCTCTGACTAAATA CAGACAAAGTAATGGAGCAGCCGATGCATCAAACTCAAATGACCATGCCG CCACATCATCAGACAACTGCTATTCATCCCGGAGCTGCGATGGCTCACAT GGCTGCGGCTGCGGCAGCTGCAGCTGCCGGCGGAGGTGGGGGAGCGGCCA CCGCTGCTGCGGCACCGCAAAGTGCTGCTGCAACAGCCGCTGCAGCTGCT GCTGCATCACATCACCACTATCTGTCGAGTCCGGCGTTGGCCAGCCCGGC TGGATCTACGAACAACGCCAGTCATCCGGGCAATCCACAGATCGCGGCCA ATGCGCCCTGCTCCACGCTGTTTGTGGCCAATCTGGGGCAATTCGTTTCG GAGCACGAGCTGAAGGAGGTGTTCTCTAGCCATGGCAACAGCAACTGGCT CAAGCTGCTCCACCAGTAACGGCAGTGGCAGCAGCAGCAACAGCAACCAC AACAGCGCTGCGGTGCAGCAACATCCGGTGGCATTCATCGAGTTCAAGGA CCCACCGACCGCGTCTCAGGCCATGCAGCAGCTGCAGGGTAAATATCTGC TCAGCTCCGATCGCGGTTCCATCCGCATCGAGTTTGCGCGCAGCAAAATG ATCAACGAGGTGACCATAATGAACACCAAGGCACCGCCACCACCACCACC CACTGCTGTTGCTGCTACTGTTGCACCACCGCCACCGCCAGCACCCATGT ACATCCTGAACGGCGGTGGGGGGGTCGAGCATTTGCTGGTCCCAGCACCA CCGCCGTCGGCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCCAGAT GCAGCAACTGCAACAGCAGATGCACCTGCAGCAGCAACATCAACAGCAGC AGCAACTCCAATTGACCGTGGCAGCACCCTGCACTGCAGCAAGCACCACC ACCCACAGCAGCACCACTAGCGTTGTTGTTAACTCACTACAGCACCACCA ACTTCATCATCCAAATCAGCACCACCAAAATCATCTCTTTAGAGACCAAC AGCAGCAGCATCAACAGCAAGCAACAATCAAGCAACAATCAGCAACAACA AAGGAGCGGGTATGGAATCACGGCATGATTTGCTCGCTAAAAAGCTAGAG CGCGAAATGCAGCAACAGCAGACGCAAGTGCATCACCAGACGCAGCAGCA ACAGCAGCAGCAGCAGCACCACCACACAGCAGCGCAGCACTACCACCACA GCCACCAGACAGCGCACCACCAGCAGCAGCAACAGCAGCACCACCAGCAG CAACAACAGCAACAGCAGCAGCAACAGCAACAGCAGGCACAGCAGCAGCA CCTGAGCCACCACCACCACCACCATCATCACCATCAGCAGCAGTTCTTGA TGACGCCGACAGCAACCTGACCTTATGCGACAACGACGACGACGACTACG ACGCCGCCGCACCACCACCCACATCAGCTCCACCAGCCGCACCACCAACA GCAGCAGCAGCTGCAGCCGCACCACATCTACTCGTACGTGCTGCCGGCAG TCAGTCACATAGCGGCCTGAGGTGGCCACATTTGAGTTTGAGAAAATCGA GGCAAAGAAGCTCCGCATGCAACGGATTCATGCGAGAAGTAAGAACCTTT AGTTCTAGGCATACAAAAATAACAGAAAAAAAAATGTTGAAAAATCAAAA AAAAAAAACTAAAAACAAAACAAAAATGCAAAAAGAAGTTAATTTATATA TATATATGACGGAGAGGAAGCAGCTGCCGCAGACCCGTGTATAACCCCAG TTTAGTGAAATTTTTCGACAGGCAACAAAAGATTTGTAGTGAAAACCAAA AAACGGGATAAACTTGTAGTAAAATATACAATTTACCATAGATCGAAAGC TGAGCGAACTACTTAACTAAGTTAGTTGCAAATACAGCCGATATGCCCCC TATAAACGAATACACATATATACATACATAAACACCTATATATACATGCA TATATATATAGCAAGCTGATCGAGAATTTGTTTGTTATTCAATATCCATT TAATGTTCTTTTGTAGCTTGATAAATTGATTTTGTTTGAAGTTTTTGTTT GTGAAATGTTTGCGTTCTTTTATTGTTACTTCTTACCCTACATTCAAAAC CCCCCCCCCCCCCCCAAACATAAACGACTTTTCACACAAGGAATTGAGAC ATGAAATTCGTATTAATCTCATAATTTCTAATTTTTCGATATATCAAACA GCGTAAGGGAATAAATTATGAACAAAAAGTGTAGGGAGAAAGAAAAGTAT ATAATTATAGCTTAACCGAATGTGCCCTTTAAATAGCTCTCTTTCTAGAA TTATAAAAAAGTAATATGAAACAGAAAAAAAAAAACAACCAAAAGAAAAC AATTTAAATGTATGCATTAATGTAATAATTGTATAACTAGTAAGGTAAAT TTTCAAAATGTTACTCAACAAGAAAATTCTACAAAACAAACCACAACGAG TAGTCGACGTCATCGTATAAATTTAAATTTATATTGAGGAATACTGAAGA AAGCTGGTTTCGAAATTTATTTGTTACAAACGTAAGCATAACAAAATTTA AATGTGAATTTCAAATTTACCCGATAAGGACCTATCGACGACATGGGATG AACGTTGCACGTGCGCTGTAGTGAAGCAAAGACTCGAGAAAAAAACCGAT TTTTAAGAAACAAGAAACCAGAAATGCTGAAACTGCTGGCACAGGACACT CCAAAACTTTCCGCCCAGAACTCTATGTTTTCTTTCGCCACTTTTGGTTG AGACTTTTCTGCGTTTCCCCTACAAAGACTTGAACTTTTACTAGAGGCCC CCAAATCTGCAGGACTTCATTTACATAGTGAGAAACTTTATTCCTAACCA ACTTTCGAAATGCTAGAACAATCAAATCACATTTCTTGCTAAACCAACGA TCGATTTAATGGGGTGGGGGAGGGGAGGTCGCAGAACGAGATCGTATGCG TAGGTATCGAATATCGGATACCGTGTGAGGGTGGGGAGAGTGCTTAAGAG GTAACAGCAAACAAGGACGAGTAAATAAAATCAATGGCATATCATCTTAC GTAGCAAAGCATAAGTCGAGCATGTATGTGTGACTACAAAAAGCGACAAA TTCTATTGTAACTAAATGCAAGAGCAGCAGAACAGCAGAAACCAACTATA ATTAATTATTATAAAAACAATGTAAAGCTTAAAGGCTAACAACTATATAT AGTTAAATACGAAAACAAATTGTAAGCAAGCTTTTTACATCATAATTTTC GAATGGTTTTCGAAAGAGTTCGTTCAGCCTTGTTTAAACCAATATAAGTA TATATATATATACGGATAAAATCTTACATTTTTACCAAAGTTGTCCTTAC TAATTAAACAAGTTATGTTAACCAATTCACACACAATTTGTTAAACAAAA ACAGAAGGAACCCACGAGTAAATCAACTAATTTTAAACGTTTTTTAAAGC TTAGTTTAGTGTAAACGTGACTAGACATACCAAAGGCATATTTGAAACAA AAACCACAGTTGTTAGAAGGAAATATGAAACAAAAAGAGAAACATTTACT AATTGGTACTGTTTTAGCCCTTTTTCCATACAAATTTTCTTTAAATATTT AATTACATTATTTCCCCGTCTAACTTTAGTCGAATGTAAAATGCATATTC CGTCCAATTACATTTCGTGCTTTCCTCTTGCCC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) cpo-RO FBtr0330270 9118 cpo-RP FBtr0330271 5461 cpo-RQ FBtr0330272 4524 cpo-RR FBtr0330273 7247 cpo-RS FBtr0330274 9229 cpo-RT FBtr0330275 9743 cpo-RU FBtr0330276 5086 cpo-RV FBtr0330277 8397 cpo-RW FBtr0330278 4469 cpo-RX FBtr0330279 6116 cpo-RY FBtr0330280 6131
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) cpo-PN FBpp0303301 606
Derived from OTHER transcripts	Name FlyBase ID Length (aa) cpo-PO FBpp0303302 748 cpo-PP FBpp0303303 841 cpo-PQ FBpp0303304 762 cpo-PR FBpp0303305 749 cpo-PS FBpp0303306 962 cpo-PT FBpp0303307 607 cpo-PU FBpp0303308 606 cpo-PV FBpp0303309 607 cpo-PW FBpp0303310 606 cpo-PX FBpp0303311 606 cpo-PY FBpp0303312 606
Comments
	Unconventional translation start postulated (CUG encoding Met).
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_169783
Synonyms
	CG43738-RN cpo-RN
References ( 0 )
	No references are recorded in FlyBase at present.