Transcript Dmel\HDAC6-RG

General Information
Symbol	Dmel\HDAC6-RG	Species	D. melanogaster
Annotation Symbol	CG6170-RG	FlyBase ID	FBtr0330405
Feature type	mRNA	Associated gene	Dmel\HDAC6

Evidence Rank	Strongly Supported	Length (nt)	4483
Evidence Score	15

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 67 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	DPiM_LD43531 LD43531
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	37750 52496 67356 67435 74431 105655 160526 214467.29 214513.33 EC27906 EK150163 EK173451 EK195439 EK196054 EK204243 EK231046 EP08237 EP10613 GH02353 GH03172 GH07634 GH09987 GH12954 GH15347 GH18847 GH24348 IP03244 IP13026 LD23133 LD46921 LP06782 LP11979 LP16218 LP23634 RC0-DP0007-150700-011-D11 RE11582 RE26694 RE32668 RE33865 RE35729 RE38458 RE38558 RE38846 RE48590 RE58464 RE68134 RH14549 RH19125 RH20068 RH25189 RH28676 RH30082 RH31395 RH33251 RH33263 RH36545 RH38569 RH39638 RH42220 RH45507 RH45509 RH56743 RH61955 RH66894 UT01717
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	CCACACAAACATTGCACTCCGCTCCGCCCGCGCGTTCTCATTTCCCATCT CTCTCACTCTGTCTCTCGCGCTCACCGTCTCTCTCTCTCGCTCCGCCTCG CAACCCCCACAGCGCTCCACAAACCGGGCCCCACATTCTTGTGTGTGATT TCTGGTTCAGGTTCTGATTTCCCGCGTGTCCTTGTGTGTGTGCGCGCTGC AGTGTCTGTGTATCTGTTACTGTTGCTGCATCTTCTGCATCAACTGCAAC GTTACCAAAAATCAAAAGACAATCGCCTGCAAAAGCTTAATTTTGTTGCT CAGTGTTTTAAGTATTAGCTGTTTGCAAGCAGCACACACACGTAAGAAAC AACAAGAACAACGATAAAAGACAACAACACAAATGCAGAGCATTTGAAGC GCAAACACACACAAGCATTCGGTGCGGCTGTAAGAGCGAGACACAAAATA AGGCTAATTTATAAAAGAAAAGTGTGCTGCAAGGAATCGATAAATAACGG GAGTCGAGGAGCGGAATAGGAGTAACCAATAAATATAAATACTGTAAATG CGATATTAAAAAGCGACAACAACAACAAAAAGCAGCTGTGAATCACTCCG TCCCGCTCCCCCGCGCTTTCAGTCACTCCAGTTGCTCCACTTCCATATAT ATTCGGATTTGGACTCCGATTCGGATACGGATTTCGCTTGGTTCGATTCT GTTTTCTTCGGATCGGTTTAGCTTTGCTTGCCAACTCGAAATCCCACAAA CATGAGCCCGCCCATCGTCACGCGACGGAGTGCGCAGCAGGCAAAGATTC AGACACGGGCAATGGCCAGTAAATCGAAGACGGGCACGACAGGGGCGGCG ACGGCGGCCGGCGGCACCGGCAGCAGCAGCGGCAGTATCAGCGGCGGATT TAATGCCGCCGATCCGCGAAAGTCGAACAAACCGAACGCAGCGCTCTTGG AGGCGAAACGTCGAGCTCGGAACAACATGCTCAAGAATCAGGGCTGCGGA TCGCAGGAGAGCGTCACGGATATATTCCAGAATGCTGTCAACAGCAAGAG TCTGGTGCGGAAACCAACGGCACTGATCTACGATGAGTCCATGAGCCAGC ACTGTTGCCTGTGGGACAAGGAGCACTACGAGTGTCCCGAGCGCTTCACA CGAGTCCTGGAACGCTGTCGCGAACTAAATCTGACGGAGCGCTGCCTGGA GTTGCCCTCGAGATCGGCGACCAAGGATGAAATTCTGCGCCTGCACACAG AGGAGCACTTCGAGCGGCTGAAGGAGACGTCCGGGATTCGCGATGACGAG CGCATGGAGGAGCTGAGCTCCCGCTACGATTCAATTTACATTCATCCGTC CACATTCGAGCTCTCCCTGCTGGCCAGCGGCTCCACCATCGAATTGGTGG ACCATCTGGTCGCCGGAAAGGCGCAGAATGGCATGGCCATCATCCGGCCA CCGGGTCACCATGCGATGAAGGCCGAGTACAACGGTTATTGCTTCTTCAA CAACGTGGCACTGGCCACCCAGCACGCCCTCGATGTTCACAAGCTGCAGC GCATCCTGATCATCGACTACGATGTGCATCATGGGCAGGGAACCCAGCGG TTCTTCTACAACGATCCCAGGGTGGTTTACTTCTCCATCCATCGCTTCGA GCACGGAAGCTTCTGGCCGCATCTGCACGAGTCGGATTACCACGCCATTG GATCGGGAGCGGGCACGGGATACAACTTCAATGTGCCGTTGAATGCGACG GGTATGACCAATGGCGATTACCTGGCCATTTTCCAGCAGCTGCTGCTGCC GGTGGCCCTGGAATTCCAGCCGGAGCTGATCATCGTTTCGGCTGGCTATG ATGCGGCGCTGGGCTGTCCGGAGGGTGAGATGGAGGTGACGCCGGCCTGC TATCCGCACCTGCTGAATCCGCTGCTGCGACTGGCCGATGCCCGGGTGGC CGTCGTTCTGGAGGGCGGCTACTGCCTGGACTCGCTGGCCGAGGGTGCGG CCCTAACCCTGCGCTCCCTGCTCGGCGATCCTTGTCCGCCGCTGGTGGAG ACAGTGCCACTGCCGCGTGCGGAACTCGCCCAGGCCCTGCTCAGCTGCAT TGCCGTGCACCGACCCCACTGGCGATGTCTGCAGCTCCAGCAGACCTACG ATTGCGTCGAATTGCAGGATCGGGATAAGGAAGAGGATCTGCACACGGTA CTGCGCCATTGGATTGGTGGACCACCGCCTATGGATCGTTACCCTACGCG CGATACGGCCATTCCGCTGCCGCCGGAAAAGCTGACCAGCAATGCCGCTC GTCTGCAGGTGCTGCGCGCGGAGACGAAGCTATCGGTGCCGTCGTTTAAG GTGTGTTATGCCTACGATGCCCAAATGCTTCTGCACTGCAATCTCAATGA TACGGGGCATCCGGAGCAGCCGTCGCGCATCCAGCACATCCACAAGATGC ACGACGACTACGGTCTGCTGAAGCAGATGAAGCAACTGTCCCCCAGGGCG GCCACCACAGACGAGGTGTGCCTGGCCCACACTCGCGCCCATGTGAATAC AGTGCGTCGATTGCTGGGCCGCGAGCCGAAGGAACTGCATGACGCTGCTG GGATCTACAACTCGGTGTATCTGCATCCGCGCACCTTCGATTGCGCCACC CTGGCCGCCGGTTTAGTGCTGCAGGCGGTGGACAGTGTGCTGCGTGGCGA GTCCCGCAGCGGCATCTGCAACGTCCGTCCGCCGGGCCATCATGCCGAGC AGGATCATCCGCACGGCTTCTGCATTTTCAACAATGTGGCCATTGCGGCG CAGTATGCCATTCGGGATTTCGGTCTGGAGCGTGTGCTGATCGTCGACTG GGACGTCCATCACGGCAATGGGACGCAGCACATTTTCGAGTCCAATCCCA AGGTGCTCTACATCAGCTTACATCGCTACGAGCACGGCTCCTTCTTCCCG AAGGGACCCGATGGCAATTTCGATGTGGTGGGCAAGGGAGCCGGCAGGGG CTTCAATGTGAACATACCCTGGAACAAGAAGGGCATGGGTGACCTGGAGT ACGCACTGGCCTTCCAGCAGCTGATCATGCCCATTGCGTACGAGTTCAAT CCGCAGCTGGTGTTGGTATCCGCCGGATTCGATGCTGCCATCGGCGATCC CTTGGGCGGATGCAAGGTGACGGCCGAGGGCTACGGCATGCTCACCCACT GGCTGTCGGCTTTGGCCAGCGGCCGGATAATCGTTTGCCTGGAAGGTGGC TACAATGTGAACTCCATTTCGTACGCGATGACCATGTGCACCAAGACGCT GCTGGGTGATCCCGTGCCGACGCCCCAGCTGGGAGCCACGGCGCTGCAGA AGCCACCAACGGTGGCCTTCCAGAGCTGTGTGGAATCGCTGCAGCAGTGC CTGCAGGTGCAGCGCAACCACTGGCGCTCGCTGGAGTTCGTCGGACGGCG GCTGCCGCGGGATCCCGTTGTGGGCGAGAACAACAACGAGGATTTTCTTA CCGCCTCCTTGCGACACTTGAATATCTCAAATGACGATGCTACGGCTGCG GCGGGCGGACTCGCCGGCGATCGTCCCGACTGCGGCGATGAGCGGCCCAG CGGGAGCAAGCCCAAAGTCAAGGTAAAAACGCTCAGCGACTACTTGGCGG AGAACAAGGAGGCCCTCGAGCAGAGTGAGATGTTCGCCGTGTATCCGCTC AAGACGTGTCCGCACTTGAGGCTCCTACGTCCGGAGGAGGCGCCCCGATC ACTAGACAGCGGAGCGGAGTGCAGCGTTTGCGGATCGACGGGGGAGAACT GGGTGTGCCTGAGCTGCAGGCATGTGGCCTGCGGTCGCTATGTGAACGCC CACATGGAGCAGCATTCAGTGGAGGAGCAGCATCCGCTGGCGATGAGCAC GGCTGACCTGTCTGTGTGGTGCTACGCGTGCTCCGCGTACGTGGACCATC CCCGCCTGTATGCCTACCTCAATCCGCTGCACGAGGACAAGTTCCAGGAA CCGATGGCCTGGACACATGGGTGTGCGTGGCGCGAGGATGGCTGCTATGC GACGGGGCCCGATGGGCGAGATGAGGATGACGATGATGATAATGGCGCCG GTAGCAGCATTTGCCTGCGACTGGAGCGCAACAACTGACCCTTAGCCATC CGCGTGCTGGACGCCCTCACGGACTACTTGTGCGCGCTCTGCCCGCCACT AAGGCACCTAATCCATTTCCTGGCCGAGCACCTCTGGCCGCTGCTGGAGC GCATTTACCTTAACCTGTTGCACTACTTCCTGGCCCACTGAGCACCCCAT ATCCAATCCTCTAGCCCGCACCCACAACTGATCTGAAAACTGCTGCAACT GGCAGCCGGTCGGTCATCCCCTGGAGATCCTGGCACCAGTCACCATACCA TTTATACAAATGCAAATTGTTAAAGTTATCAACTAATGATCTAATAAATA ATTCAAGTGTTTTTTGAGTTTATTTTCGAATAC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) HDAC6-RA FBtr0074008 4483 HDAC6-RB FBtr0074010 3848 HDAC6-RC FBtr0074009 4241 HDAC6-RD FBtr0301774 3451 HDAC6-RE FBtr0307383 3817 HDAC6-RF FBtr0307384 3272
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) HDAC6-PG FBpp0303431 1179
Derived from OTHER transcripts	Name FlyBase ID Length (aa) HDAC6-PA FBpp0073825 1128 HDAC6-PB FBpp0073827 1135 HDAC6-PC FBpp0073826 1138 HDAC6-PD FBpp0290988 883 HDAC6-PE FBpp0298372 1108 HDAC6-PF FBpp0298373 1022
Comments
	Stop-codon suppression (UGA) postulated; reflected in aa sequence of predicted polypeptide. Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001272640
Synonyms
	HDAC6-RG
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]