Transcript Dmel\lig-RJ

General Information
Symbol	Dmel\lig-RJ	Species	D. melanogaster
Annotation Symbol	CG8715-RJ	FlyBase ID	FBtr0330630
Feature type	mRNA	Associated gene	Dmel\lig

Evidence Rank	Strongly Supported	Length (nt)	5116
Evidence Score	15

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 87 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	MIP15115
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	17893 19969 54507 57113 62394 63383 65681 74683 81105 122018 163037 214481.30 214481.31 576502 AT19904 AT27395 AT31976 CK01.35D.H7 CK01.64A.E12 CK01.87B.D1 CK01.118A.F5 CK01.129D.D2 Dmel_dig_003409_0587_1914 Dmel_dig_007695_0626_2230 Dmel_dig_014166_0606_0746 Dmel_dig_015376_0703_3332 Dmel_dig_016568_0649_2829 Dmel_dig_021249_0642_3294 Dmel_neb_010024_0604_2383 Dmel_neb_010080_0827_3090 Dmel_neb_010649_0112_0867 Dmel_neb_015854_0955_0503 EC00429 EC00829 EC053309 EK064651 EK069013 EK089718 EK130157 EK134118 EK179940 EK193437 EN17815 EP03838 EP04428 EP06511 EP07811 GH03681 LD04113 LD11576 LD12187 LD15583 LD32162 LP08501 LP18480 LP21115 LP22142 RP003050004 RP003053574 RP003150387 RP003251425 RP003333915 RP003349767 RP003372098 RP003405601 RP003422464 RP003440544 RP003464668 RP003472433 RP003476775 RP003497593 RP003498952 RP003517708 RP003571969 RP003615503 SD04609 SD05132 SD07143 SD12735 SD17066
End(s) extend beyond the annotated transcript, internally consistent	214315.37 214439.43 Dmel_dig_011664_0614_2670 Dmel_dig_014110_0702_3196 Dmel_dig_017881_0619_1934 LD13114 SD05132
Sequence
	CCTGGTTTTAAGATCGAATCCTTCATCTTTTTCGTATTGCAGCTAATTTG TATATACAGTGTACATAGAGATGAGCACACAAACTCGTTCAGGCGGCGGG GGAGGCGGCGGCCATGCCCGCAACCAGAAAAAGTCAAATGCCAGCAACTC CGGCGGAGGAGGAACCGGCCATCACGATGGAGTCTCACATGCTGCGGCCG CTGGCAAGAAGGGAGGCCAGGATGCCAGCAAGACAGACAAGCCAGAGAAG GCCCAGCCCAAGGCTACCACCGAACAGTTGCGCATTGCCCAGATCACCAA TAGCACCACAGAGGATCCGCAGATCAACGAGAAGGTTCTCCTTCTTTTGA CCATGACCCAACGTTCCGAGGAGGAGGTCTGCTGTGCCCTCAACGAGTGC GATTACGACCTGGAGGCCGCGGCCAACTTCTTGATCGAGGAGCTACCGCA GGGCGCCTTTGCCAAGTACGAGAAAAAGCGCAAGAACAAGGCTGCAAATA ACACGGCTGATGGTGCTGCTGGCGATGGCGATTGGGCCGATGGCAATGGC AATGCGGACAGGCGGGAAAAGTCGCGAAACCGCAGCTCAAATCGCGGAGG CACCCGTGGCTCCAGTGACAGTCGTGGATGGCGCGGAAGAGAGACTCGTG AGAATGAGCGCAACCAGCGCGAATCTCGCGAACCTTGGTCCGGGCAAAAC GCTGGTCAGGACCGCGGTGACGATCGGGCAAATGACAACTACCGCGGGCA GCGCAACGGCGGCGGACGCAGTGGTCCCGGTGGCGGTGGACGCGGTGGTG GCTTTGTCTCTCGCTCTGGCCGTGGCGGCGGCCGCATGGGGGGACGCACC GGTGGACCGCGTGGCGATCGCGGCAGCGGAGGCCCTGGTGGTGCTTATGG ATCAGGTCGCGGTGGCAATGCAAACGAGGATCACCACGAGGTTGAGCTGT GGGACAACACCATTGCCCAAAATGCCGAGAAGCAGCAACAGGCTCATGAC GATGCCTGGGGCGACTGGAACAACGAGGAGTACGAGGGCTCGCTCAAGGA CAGCAAGGTGTTCACCACTAGCAACCTGGCAACGCAATCCGCTGCCAACG TGGTTAGCGGAACTGGCGCGAGTGTTACAGCTGTTCCTGCGGCGGCTGGA ACCGAGATATCGGCGCCACCGGGCCTTGAACATCAGTTGGTGCAGCAGGG ATCTCATCTGGAGGAGAGCTCCAGCAGCGGCCCAGCGGCGGTCACACCGC CAGCAACGCTGAGCGGCTCGGCGACCACGCCGCTGCTGCAATACAGCGCA GCGGTCAGTAATCCACCGCCCCAGCTGCAGTCCCAGGGCACACAGTCAGG AGCGGGTACAGGAGCGAGCGCAGCTGCCGGCGGAGGAGCAGGCAGCACAC CGTCATCCTTTGTATCCGCCTCTCCCGACACATTCTCAAGCGCCGCCTCG GCAGCTGCCACGCTGGTGCATCAAGCACAAAAGCAGCAGCAACTTCAGCA GCAGACGACGCCTATCAAGCCGTCGGCTACTTTGTCGGTCGAGCAATCTC AGTATTTCAACTCGTTGGCCAGCCAGGGCGTCAGCCCAGGTTCTGTTCCA GTGCAATCGGCGCCAGCGGGTTACGCGCAAAACCCCGTGGCCGCCTACTC CCAAACTAGCACTAGCGTGGGTGTGAGCCAGTACCCCAATACCTATGCCA ACGTATTCGCTTCTGGAACGGCAGCTGGAGCTGGCACTGCCGAGCAATCG CAGCAGCAACCGCAGATACGGAGGGCACGTGTTAAGCTGCCACCACCCTC GAAGATTCCTGCGAGTGCCGTCGAAATGCCCGGAGACAATGCACTGAACA ACATTGGCTACCTGGACGTGCAGTTCGGCGCTCTGGACTTCGGCACGGAC GATGGCTTCGAGCCATTGCCGGAGAAGGTTGGTTCGGGCTTTAGCATTGA TGGTCAGCAGCAGCAACAGCAGCCAGATGACTACCAGAGCAAGTCCCAGC AACAGCAGCAGGTGACGCTAGCGGCAGGTCTACAGAGTTCGCAGATTAGC GATGCCTTAAATGCAGCGGGCTATACAAGCCGTTCGACGTCACAGCAGCA GCAGGGCGTTAGCTCAGCGGTGAATGCCACAATCGATCAGCTGACCAAGA GCGATCCCTACGGACAGACGGGCGGCAGTGGTAACGCCTACCAAAACGCG TACCAGAGCAGTGGAGCGAGTAAGACAGCCAGTGGCTTTCCGACGACCGC GCCCGGTGGCTACAGCAGCTCCACATACGCGAATGTGCAAAGCTCAGTAG CCAACAGTTACCAGCAGCAGGGATACGGCTCATACCAGCCCAGTTCCTAC CAGCAGCAGGCTGGCAGCGGGGCTCAAAGCGGTACAGGTGCGGTAAGCGG AGGCGGAGGAACGGCGACGCAAAACATTCCGGTTGGAGGCAGCAGCAGCC AAAATAGCACGAGCGGCAATGCGAGCTCTGCCTACCTCACATCCGGATAT TCGACACCACAAAGTGCTTACCAGTCAAGCCAGAGTGTTTATGGCAACAC TGGACTGTCCAACAGCAGCGGGTTCTCTGGCAGTGCGAGCAACGCGTCCT CGCAGTACGCCAATTTCAGTGCCAGCGCCAAGCTAAAGGATGCGACCACG GCCAGTAGCGCCGCTCATTACGACAGTGTCTCAACCAGCAGCGGAGTGAG CAGCAACAGCGGAAGCACAGGCAATGGCGGTGTGGTGAGCGGTCAAACAG GTGCTAACCAGGCGGCTGTATCGAACAATAACAGCGTGAGCGGCAGCAGC TCGGTCAGCAATGTGACGGCAGGCGTTGCGAGTGGCAACGTAGCTGGCGT GGGCGGAGGCGTAAGCCAGAGCGGCGTAAGTAGTGGAGTCGGCGTGCCCG GTGGCAGCGCGTCCAGCGTCGGTGTGAATGTGAACAACAACAGCAGCAGC GCCAGCTCGGTGGGAGCAGCGACCGTTGCCCAGACAGCCACGGGAACCAC CGCTGCAGTGCTGGCCTCGCTGACCAACAAGAACACCAGCAGCAGCAATA GCAGCGGCAGCGGTGGCAGTGCTGCCACGACGACGGGCAACGCCAGCGGA CAAGGTGCGGGAGCAAGCACCGGCGGCGTGGGCAGCTCGTCGGGTGCTGG TGGTGCTGGTAGTGGTGGTGGCAGCGGTAGCGGCTTGGTGCCCACCAACA TCCAAATGGTTAGTCAATATATTCAGACTGGATTGCCATACTATCAGCAA CCAGTGTATTCCTACGAGGAATTGCAAATGATGCAACAGAGAGTGCCACA TGTGCCATAACACGCCCAGAATGCTCGCGTGAAGACGAACCTAATGCTAT AATTCTCAATTGCAGCAGGGATATTACGATCTGAACTATCCGCCGGCCAG TTTAGGAGCTGGACGTGACAACCTCGGCTCTGTGACGTATTCTGCTATGA ATGATGGACGCTTTGCCCGCACTGACAATAACTCCAGTCCGGTCGGCAAT GTCTCCAGCACAATGTCGCAACAGGCTGGCTCAAGTGCGCCCATGCTAAA TGTTCCTTACGCCTACTTCTATGGTGGCAATGTAATGCCCGGTAGTTTTC AATATGGCACGCCCGCCATATATCCACAAATACCGGCAGCAAACACTGCC TCCGGTCAACAGTTCCCGAAGCCTTCGTATAGCGCGGGCTACGGCTCGAC CAGCTATGACACTCTGTCGCAGACCACGCAGGACTACAGCAAGGGCGGCT ACTCGTCGAGCGTGAATCAGCAGAGCAAAACTCAGACTGTGTCCAACCAG TCGCAGGCAGGCACTGGATCCGATCTGACCTCTTCTATGTACGGAAAAGG ACACGTGGCGCTGAACAAGGTTAATTCGTACGAGAAGCAGAGTTTCCATT CGGGCACTCCGCCCCCGTTTAACATGCCCAACACTCAGACGGCTGGAGGC ACCTCTGCCCAACCGTACGGCATGTACTTGCCGATGCCAGCGGCCGGACA CCACAATATGATCCATCAGCCCATCCACCAGGACTCGAACAGTGCCGGGC AGCGTCAACAGTCGACCAGCCAGTCGAAGTCTGCTGGCAAGCAAGGCTAC TCGCCCTCGTACTGGGCCGGACAGAACTAGCTTCCGGAGAACACGATCTG GCGGCCCCTGCAGATCGCCCGCGCGAACGACTTTTATAGCCTTCGCAGCA ATAGCAGCAGCACCACAACAATAACAACAACAACCACCACCACCACGCCC ATTCACCACATCTACAGCAAGAGCAGCGCCAGCAATGCCCGGACGCTGCC CATCACACTCGGAACCAACTCAAAAGTGACCACAATAGCAGCCAGCAACT CCACAACGAGCGTGGATGCCAGCAACACACCAACAGCAGCAATAGTTAAG ACGACAACATCGGCGATGCCGGGCATTCCCGGCCAGTTGCTGATGCTCGT CAAGGAGCAACAGCAGCCACAACCACAGCCGCCACCACAACAACAACAAC ATCAAGCACTCGCCGACAAGGTGGGGAGCGAGAAATCCTCGCCAGCGTCG GAGAATGATTATCTAATATACGATGATAAGCGATCATACTTTACTTAATA AGAAACGTTTTTACTACGAACGCACTGTAAAGGCGCCGCTCAGCAGCGTC CTGACCACCACGCCTCCCTCCTCCCCTCAGCCTCAAGACACACCACACCC CACACTTGCGGAGGCGACTCCTAAAGCCAACCACACACACAACACACTTC CTCACACAACAAAGAGTAGAACGAAACATACAGCAACATCCGCATAAATA TACCAAGTACCATTTTCACATTGCATACAAATAAATTTACAAAGATAAAG AGTAACAATTATTAATTATTAAAGGCGTAAAACGATTTAACAGATTTAAG AGTGTAAGAGAGAAACCGGAAATGCAGAACAGTAAATTAAAAATACAAGT ATATATATTAAATAAACCACAAAACCACAAACATAACGTGAATGAGAAAA AACAAAACAAACAAAAATTAATTATTGTAATCGGTTTAAACTTATATGTA TAATTATAACCTTAATATTTAAACTAAATACAAAAAAGAAGATACGATTA AATCCAAACAAAATGC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) lig-RA FBtr0088774 5103 lig-RB FBtr0088775 5139 lig-RC FBtr0088776 5458 lig-RD FBtr0100575 4564 lig-RE FBtr0301915 5070 lig-RF FBtr0301916 5072 lig-RG FBtr0301917 5136 lig-RH FBtr0304681 5064 lig-RI FBtr0304682 4974 lig-RK FBtr0330631 4857
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) lig-PJ FBpp0303480 1079
Derived from OTHER transcripts	Name FlyBase ID Length (aa) lig-PA FBpp0087852 1343 lig-PB FBpp0087853 1332 lig-PC FBpp0087854 1343 lig-PD FBpp0100030 1375 lig-PE FBpp0291129 1332 lig-PF FBpp0291130 1332 lig-PG FBpp0291131 1332 lig-PH FBpp0293223 1330 lig-PI FBpp0293224 1300 lig-PK FBpp0303481 1417
Comments
	Based on cDNA(s) that contain premature stop codon and/or downstream start; may or may not produce functional polypeptide. Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001273865
Synonyms
	lig-RJ
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2005, Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. [FBrf0182792]