Transcript Dmel\n-syb-RJ

General Information
Symbol	Dmel\n-syb-RJ	Species	D. melanogaster
Annotation Symbol	CG17248-RJ	FlyBase ID	FBtr0331461
Feature type	mRNA	Associated gene	Dmel\n-syb

Evidence Rank	Strongly Supported	Length (nt)	3411
Evidence Score	11

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 83 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	GH25089
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	714 1376 19095 21059 29611 29700 38238 44656 51631 55160 55577 56569 57408 64643 65087 71426 72235 80389 101549 104449 122734 153176 160732 164280 164295 214285.19 214321.3 275339 CK01.27A.F7 CK01.52A.B4 CK01.53A.F12 CK01.89B.F3 CK01.130D.G6 CK01.169B.A4 EK042954 EK070117 EK100559 EK103834 EK117904 EK121925 EK122539 EK133632 EK135421 EK138028 EK139138 EK159851 EK165943 EK169152 EK181664 EK183250 EK191817 EK192959 EK199335 EK200507 EK200744 EK213426 EK228328 EK235101 EK245864 EK256540 EK264527 EK268637 EK268639 EK273113 EK288101 EK303119 EP03610 EP04050 GH04153 GH05324 GH06056 GH07663 GH10061 GH10629 GH11229 GH13381 GH26321 GH27152 RH52131 RH52162 RH53821 RP004217661
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	AGTTAAGCCTGGTTTTTGTAAACTCAAGTTGCCCGAGCAAAACAGTTCCA GCGCTGAGCCAGAAAATTCCTGCGAAAGGCTGTCGTGGCAAGTGTTACCC GCACACATACACATCATCCAGATCCAGCCAATCCCCCCGTGGAGTGGAGT GAATTTTCATTGACGACGGGGCGAAAAAGCTCTGGCGGAAGAGCGACAGA GAGAGAGAGAAACAGAGAGAGAGAGAGAGAAGCGGCACTGAGAGCGCAAC CCTCTAGAACAAAAACAACGAAACAGAGTTCAGCTGCACCACCACCCACT ACCTACACCACCAACGCCACCACCGCCCACTGACCATCCCACATCCCGAC CTGCGCCAGTGGAAGACAGTGAAAGAGGCCAAGTGCATCGTGCATAGAGT ACCTTCATCCTAATCATCGACAGCCGAATTCGCTGAGGCCACCAGAGCAC CACCAGCCAAACCACAGAAGCAACCACACAGCCACCAGAGCCATGGCGGA CGCTGCACCAGCTGGCGATGCACCACCCAATGCCGGAGCCCCGGCCGGAG AGGGCGGCGATGGCGAGATTGTGGGCGGACCACACAATCCGCAGCAGATC GCGGCACAGAAGCGTCTGCAGCAGACGCAGGCGCAGGTCGATGAGGTCGT GGACATCATGCGCACGAACGTGGAGAAGGTGCTGGAGCGCGACAGCAAGC TGTCGGAGCTGGACGACCGTGCCGATGCCTTGCAGCAGGGTGCCTCGCAG TTTGAGCAGCAGGCGGGCAAGCTCAAGAGGAAATTCTGGCTTCAGAACTT AAAGATGATGATCATCATGGGCGTGATTGGCCTGGTTGTCGTGGGCATTA TTGCAAAACCGTACATGTCGGATGATAATGCTGCTCCGCAGCCTCCTGCC TTGCAGCAGCAGGTGGCTCCGGCATCGGCAACTGCACCTGATTCAGCACC ACCACCACCACCACAACTACTACAACAACAAGAACAACAACTACAACCAC ACCACCATACACAAAATCTAAAATCTGAACCACCGACACTCGAGAAACCA TTGGCCGAGAAATTGACCGACCACCCACAGAGTCCGTCGAATGAAGTGGC GACTGGACAATAGAACGCTCACGATCTCTCTTGAAAACCAACATTCAACC AACCAACCAACCAACCAACCAACCAAACTAATCAGCCATCGATTAACCAC CAAGACGCATCCGTAGAACCATAGTCAAAATTAATCAAAATCGAAAAGAA AACATTTCACACTTTCTTTGTACCATTGACAAAATCGATCTAATCCGATA CACTATAAACTTGGACTCATAGGCGGGGAGCAGCCGCCACAGTACCAGTA TCCCCCACAGTACATGCAGCCACCGCCGCCGCCACCGCAGCAGCCAGCCG GAGGACAGTCATCGCTGGTGGATGCGGCAGGAGCAGGAGACGGAGCAGGA GCAGGAGGATCGGCAGGAGCTGGCGATCACGGCGGCGTGTAAGCAATCCC GCTGCCAGGACGAAAGTTTCTCGATTAGTGTGCTCCTTCAGCGGGCGAAA ACAAAGCAGAGAAGACAAAAGAAAACCAAGAAAGGAAAACTCAGTTAAAC TAGAAAATCTCGAGAATTGCAATGAAAACTCAATAATAATTTTCACTTAG ACGATGTGCACGAGTTGGTGTGAGAGGTTTTAAGTAACTTACGTCATAAT ATTAATACTAAATCTAATGCAGACGCTCCGGACAATTTGAAGTTGTTGCT AATTTGTTTATGGTTACATTATTTCATGCATAAAACGGTATATATAATTA TAAATATAAATACAAATCTAAATACAAATACAAATATATGGAACTTGAAT ATTACGAGTGACTCCAACCACTACCCTGTACTACCACCCTATACGGAACT AGCATCTCTACGCTGCACTGGCAACAAGGAGCGCCAGTGGAAGCAGGAGG ACAGGCGGTCGCTTCCCGATGTTCGCAGCTCTTTGAACTCAGTTTCCTTA GCAAATCGACTAGACAAAACTAACAGAATCATAACTATTTCGGAACAGAC GCGAAACCAAAGAAATGAAATCTAAGCTTTGTTCCTAAGTAAAGTTACGC AAATATGATATTCGAAATGTATAATCCAAAAAGATGAATTTGAATCGACG GGCCGCCAGAGAAAAGGCAGTTAAATGTTTTCAAGCAAGTTTACTTATAC AAAAACAGCAAGCGTAGTCGGCTGGAAAAAAAAACAACAAACAAAAAAGA AATGAAGCCAGCAGCAAAAGCTAATAATCCCAAAGTCTAGTGAAAATATA CAAGCGATTCATTTGCTGCGTTTTGTTTACGTGCGCGCTATCATTACTGT TGTGTTTGAGAATAGCTCGAAAGGTTCGATTGAAAGCGGAATCCAGACAG TTCAACGATTAAATTAAGCGCTAGACACAAAATACGTTGGTTATCCACAG GACTTAGTTAGCTCGACGAGGCATACATATATGTTTGTATATTTCAATGT TACGAGTAATAGACGAGGCGGTAATTAGAGCATATATATGTACGTGTATG TAACGATATGATATCTAGATCTCACACACTCCACCCGAACACATTGCCCC CATCACAACCGATAGCCAATCAGGATCAGAATCAGAATCTGATTCAGGAT CAGATTCAGATTCAGATTCAGATTCAGAGAGCCACAGCTCTCAGCACATA TTGTACCCAACTTGTTCTGAAGATACAGCATACAGTACGTTTAATGTATT AACTAATTGATTCTACAAGCGCCTGCCCAAAGTGCTTTGCCTACCAACAC ATTGGGGCACGAACAAAATCGAAATTAATTAGAGAAAAAACCAAAGATTA ATGGCGAAAACGAAATCGAAATCCAATTCCAAATCCGAATGCAGGTATTT TTAGCAATATTCGTAGCGTGTACAATATGTCGCCCTTAAAGCTTATTAGA ATCAATCTCGTTCAATGTCCATCTCAACTCACCCAGGCACTTCACATGCA TATAACCATTAACAGATATAAATCAATATATGTATGTAATAACCAATGAC AAATGTTTAGAAGAGTTTCGATTTTTGTTTGGATTTTAAGCAGACCCGAA AAGAAAACAATTGTATACACAGAAACAACACCCATGAAGCCCCTGAGTAC GGAGAGCCCACTGGAGCTCCTGGCATCGCATTGCGATTTCCCGGAGTCCT TTTGGGCGGCGGAGTAATTCCGAAGTAATTCCCGTCTACCAAGACGGACA CACAAAACAAAGAAAAACTCTATAAGAATCCCCGAAAGCAACAGACGGCT AATGAGAGTATATATATATATGAACCGTATATAAACAATAATATTACTAA TTAATTTAATGATTAATTGCACCCCGAAAATACATAATTATTTAAATAAA TAAATAAAAAC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) n-syb-RA FBtr0072815 1389 n-syb-RE FBtr0072819 1462 n-syb-RF FBtr0300893 1109 n-syb-RG FBtr0300894 3027 n-syb-RH FBtr0302310 1277 n-syb-RI FBtr0306578 3570 n-syb-RK FBtr0331462 3378
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) n-syb-PJ FBpp0303878 206
Derived from OTHER transcripts	Name FlyBase ID Length (aa) n-syb-PA FBpp0072697 183 n-syb-PE FBpp0089251 192 n-syb-PF FBpp0290115 183 n-syb-PG FBpp0290116 192 n-syb-PH FBpp0291516 135 n-syb-PI FBpp0297533 135 n-syb-PK FBpp0303879 125
Comments
	Based on RNA-Seq junction data that results in a change in ORF and a premature stop or downstream start; may or may not produce functional polypeptide. Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001274340
Synonyms
	n-syb-RJ
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]