A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\n-syb-RK

General Information
Symbol Dmel\n-syb-RK Species D. melanogaster
Annotation Symbol CG17248-RK FlyBase ID FBtr0331462
Feature type mRNA Associated gene Dmel\n-syb
Evidence Rank Strongly Supported Length (nt) 3378
Evidence Score 11
Map ( GBrowse ) GBrowse View Help detailed view FBtr0072822 FBtr0072821 FBtr0331462 FBtr0331461 FBtr0300894 FBtr0300893 FBtr0072819 FBtr0302310 FBtr0072815 FBtr0306578 FBtr0072813 FBtr0072814 FBtr0072758 FBtr0330180
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 83 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence
AGTGCTAAAACTGATTGATTAGGAAAACGAAGATCAAACGAAATGTCAAC
CAAACAGTTCCAGCGCTGAGCCAGAAAATTCCTGCGAAAGGCTGTCGTGG
CAAGTGTTACCCGCACACATACACATCATCCAGATCCAGCCAATCCCCCC
GTGGAGTGGAGTGAATTTTCATTGACGACGGGGCGAAAAAGCTCTGGCGG
AAGAGCGACAGAGAGAGAGAGAAACAGAGAGAGAGAGAGAGAAGCGGCAC
TGAGAGCGCAACCCTCTAGAACAAAAACAACGAAACAGAGTTCAGCTGCA
CCACCACCCACTACCTACACCACCAACGCCACCACCGCCCACTGACCATC
CCACATCCCGACCTGCGCCAGTGGAAGACAGTGAAAGAGGCCAAGTGCAT
CGTGCATAGAGTACCTTCATCCTAATCATCGACAGCCGAATTCGCTGAGG
CCACCAGAGCACCACCAGCCAAACCACAGAAGCAACCACACAGCCACCAG
AGCCATGGCGGACGCTGCACCAGCTGGCGATGCACCACCCAATGCCGGAG
CCCCGGCCGGAGAGGGCGGCGATGGCGAGATTGTGGGCGGACCACACAAT
CCGCAGCAGATCGCGGCACAGAAGCGTCTGCAGCAGACGCAGGCGCAGGT
CGATGAGGTCGTGGACATCATGCGCACGAACGTGGAGAAGGTGCTGGAGC
GCGACAGCAAGCTGTCGGAGCTGGACGACCGTGCCGATGCCTTGCAGCAG
GGTGCCTCGCAGTTTGAGCAGCAGGCGGGCAAGCTCAAGAGGAAATTCTG
GCTTCAGAACTTAAAGATGATGATCATCATGGGCGTGATTGGCCTGGTTG
TCGTGGGCATTATTGCAAGTAACTTTATGTAGATTGCTAACTATCTAATC
CGTAAGAATTTAGTTCTTAGCCGCAATGCAATGCAAATCGAAACCAAATC
AAAAGCCAATCAATCAACCCAATAAGAACCAATCGAAATCCAAATCGAAA
CCAAAACCGAAACCAAATTCAACTCATTCACAACTGCTATGAGTAGAGCT
GCGAACTCACAGTCCAACTGACCGTTCGCTCAACCGATTCGACCTAGATG
CCTTGCGAAATTCCCATAACTATAGATCGATCGATCATATCATGTCATGC
GCTTCAGCCACCACTAGAACAATAACTAAATGCTAAGTGGCATACATATG
CGAGTATTTGTATTGTGTACCATGTATGCCCAAGCCCAACATCATCTGGT
TCCATACGAGCATACGCACAGATAAACTTGGACTCATAGGCGGGGAGCAG
CCGCCACAGTACCAGTATCCCCCACAGTACATGCAGCCACCGCCGCCGCC
ACCGCAGCAGCCAGCCGGAGGACAGTCATCGCTGGTGGATGCGGCAGGAG
CAGGAGACGGAGCAGGAGCAGGAGGATCGGCAGGAGCTGGCGATCACGGC
GGCGTGTAAGCAATCCCGCTGCCAGGACGAAAGTTTCTCGATTAGTGTGC
TCCTTCAGCGGGCGAAAACAAAGCAGAGAAGACAAAAGAAAACCAAGAAA
GGAAAACTCAGTTAAACTAGAAAATCTCGAGAATTGCAATGAAAACTCAA
TAATAATTTTCACTTAGACGATGTGCACGAGTTGGTGTGAGAGGTTTTAA
GTAACTTACGTCATAATATTAATACTAAATCTAATGCAGACGCTCCGGAC
AATTTGAAGTTGTTGCTAATTTGTTTATGGTTACATTATTTCATGCATAA
AACGGTATATATAATTATAAATATAAATACAAATCTAAATACAAATACAA
ATATATGGAACTTGAATATTACGAGTGACTCCAACCACTACCCTGTACTA
CCACCCTATACGGAACTAGCATCTCTACGCTGCACTGGCAACAAGGAGCG
CCAGTGGAAGCAGGAGGACAGGCGGTCGCTTCCCGATGTTCGCAGCTCTT
TGAACTCAGTTTCCTTAGCAAATCGACTAGACAAAACTAACAGAATCATA
ACTATTTCGGAACAGACGCGAAACCAAAGAAATGAAATCTAAGCTTTGTT
CCTAAGTAAAGTTACGCAAATATGATATTCGAAATGTATAATCCAAAAAG
ATGAATTTGAATCGACGGGCCGCCAGAGAAAAGGCAGTTAAATGTTTTCA
AGCAAGTTTACTTATACAAAAACAGCAAGCGTAGTCGGCTGGAAAAAAAA
ACAACAAACAAAAAAGAAATGAAGCCAGCAGCAAAAGCTAATAATCCCAA
AGTCTAGTGAAAATATACAAGCGATTCATTTGCTGCGTTTTGTTTACGTG
CGCGCTATCATTACTGTTGTGTTTGAGAATAGCTCGAAAGGTTCGATTGA
AAGCGGAATCCAGACAGTTCAACGATTAAATTAAGCGCTAGACACAAAAT
ACGTTGGTTATCCACAGGACTTAGTTAGCTCGACGAGGCATACATATATG
TTTGTATATTTCAATGTTACGAGTAATAGACGAGGCGGTAATTAGAGCAT
ATATATGTACGTGTATGTAACGATATGATATCTAGATCTCACACACTCCA
CCCGAACACATTGCCCCCATCACAACCGATAGCCAATCAGGATCAGAATC
AGAATCTGATTCAGGATCAGATTCAGATTCAGATTCAGATTCAGAGAGCC
ACAGCTCTCAGCACATATTGTACCCAACTTGTTCTGAAGATACAGCATAC
AGTACGTTTAATGTATTAACTAATTGATTCTACAAGCGCCTGCCCAAAGT
GCTTTGCCTACCAACACATTGGGGCACGAACAAAATCGAAATTAATTAGA
GAAAAAACCAAAGATTAATGGCGAAAACGAAATCGAAATCCAATTCCAAA
TCCGAATGCAGGTATTTTTAGCAATATTCGTAGCGTGTACAATATGTCGC
CCTTAAAGCTTATTAGAATCAATCTCGTTCAATGTCCATCTCAACTCACC
CAGGCACTTCACATGCATATAACCATTAACAGATATAAATCAATATATGT
ATGTAATAACCAATGACAAATGTTTAGAAGAGTTTCGATTTTTGTTTGGA
TTTTAAGCAGACCCGAAAAGAAAACAATTGTATACACAGAAACAACACCC
ATGAAGCCCCTGAGTACGGAGAGCCCACTGGAGCTCCTGGCATCGCATTG
CGATTTCCCGGAGTCCTTTTGGGCGGCGGAGTAATTCCGAAGTAATTCCC
GTCTACCAAGACGGACACACAAAACAAAGAAAAACTCTATAAGAATCCCC
GAAAGCAACAGACGGCTAATGAGAGTATATATATATATGAACCGTATATA
AACAATAATATTACTAATTAATTTAATGATTAATTGCACCCCGAAAATAC
ATAATTATTTAAATAAATAAATAAAAAC
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0072815
1389
FBtr0072819
1462
FBtr0300893
1109
FBtr0300894
3027
FBtr0302310
1277
FBtr0306578
3570
FBtr0331461
3411
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0303879
125
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0072697
183
FBpp0089251
192
FBpp0290115
183
FBpp0290116
192
FBpp0291516
135
FBpp0297533
135
FBpp0303878
206
 
hide Comments
  • Based on RNA-Seq junction data that results in a change in ORF and a premature stop or downstream start; may or may not produce functional polypeptide.
  • Transcript terminates at site supported by polyadenylated cDNA.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
hide Synonyms
n-syb-RK
 
hide References ( 1 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]