Transcript Dmel\Shaw-RE

General Information
Symbol	Dmel\Shaw-RE	Species	D. melanogaster
Annotation Symbol	CG2822-RE	FlyBase ID	FBtr0332185
Feature type	mRNA	Associated gene	Dmel\Shaw

Evidence Rank	Moderately Supported	Length (nt)	4380
Evidence Score	7

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 28 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	Dmel_neb_013497_0089_1087 EK106111 EK130515 EK162647 EK165419 EK167846 EK186241 EK191212 EK253503 EK277639 EK292024 EK296222 EP03346 EP09524 FGM302B05 FGM302F11 GH03904 RE10814 RE68808 RP004099821 RP004146313 RP004186189 RP004236903 RP004244122 RP004252421 RP004255297 RP004268221 RP004546768
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	TCAGTTTGTTAAATCGCCTCGAACGGTTCGGAACGCGCGCGCTCGAAGAG ATCGGACGGCCAACTCCCCGGAAAGAAAGAAAAATAGTGGAAGGAGGCGC CCCCACAAGGCGAACGAGTGTAGTGTAGTAGTGAAATAGTCCTCGATTTA GTTTACCCCTTTTCCGCAATTTTCACCAAGCCCGAAACATTGGATTTCCT GTGATTTTCCGACTTTTCCTGCGACCAGACTCCCCAAAATCCCCAGTATC GGAACTATGTTTATGGGCAGAGCGCAACGAGGCCGCAGGATGAGAGAATA GCGGCATGTTGTCCAACTCAGCCCCAACGTATGGTGGTACTAGGTCCTGA GGCCTGATCCCCATTGGGTGCCGAAGAGTGGATCGAAGTGGTGCCTTGAC GGAGTGGTAGGCATAACTGCATAAATCGTGGGCAAGGACAACGAAAAGCA TTCAGCCATGAATCTGATCAACATGGACTCGGAAAACAGGGTGGTGCTCA ATGTGGGTGGCATTAGGCACGAAACCTACAAGGCCACGCTGAAGAAGATT CCGGCTACGCGATTATCGCGATTAACAGAGGCGCTGGCCAACTATGATCC GATACTGAATGAGTACTTCTTTGATCGGCATCCGGGCGTCTTCGCACAAG TGCTCAACTATTACAGAACTGGAAAGCTGCATTATCCCACGGATGTGTGC GGTCCGCTGTTTGAGGAGGAATTGGAGTTCTGGGGCCTAGACTCGAACCA AGTGGAGCCCTGCTGTTGGATGACCTACACACAGCATCGCGACACCCAGG AAACCCTAGCCGTACTCGATCGTCTCGATCTGGATACGGAAAAACCGTCC GAAGAGGAATTGGCACGCAAATTCGGCTTCGAGGAGGACTACTACAAAGG CACAATATCCTGGTGGCAGGAAATGAAGCCGCGCATTTGGTCCTTGTTCG ATGAGCCCTACAGTTCCAATGCAGCCAAGACTATTGGCGTGGTTTCGGTG TTCTTCATCTGCATTTCGATCCTGTCGTTCTGCCTGAAGACCCATCCCGA TATGCGGGTACCCATCGTCCGGAACATTACAGTGAAAACTGCGAATGGAA GTAATGGCTGGTTTTTGGACAAAACGCAGACCAATGCGCACATAGCCTTC TTCTATATCGAATGCGTGTGCAATGCCTGGTTTACCTTTGAAATATTGGT GCGCTTTATCTCATCGCCGAACAAGTGGGAGTTCATCAAGTCATCTGTTA ACATCATAGACTACATAGCGACGCTTAGTTTTTATATCGATCTAGTGCTT CAGCGGTTCGCATCGCACCTGGAGAACGCTGACATCCTCGAGTTCTTCTC GATCATCCGCATCATGCGTCTGTTCAAGCTGACGCGCCACTCGTCCGGAC TGAAGATCCTGATCCAGACGTTCCGGGCCTCGGCCAAGGAGCTGACCCTG CTGGTGTTCTTCCTCGTCCTGGGCATCGTGATCTTCGCCAGCCTTGTCTA CTACGCGGAGCGCATCCAGCCCAATCCGCACAACGACTTCAACAGCATAC CGCTGGGCCTGTGGTGGGCCCTGGTCACAATGACCACCGTCGGCTACGGC GACATGGCCCCCAAAACCTACATCGGCATGTTCGTGGGCGCCCTCTGCGC CCTGGCCGGCGTACTAACCATCGCACTGCCAGTGCCCGTCATCGTCAGCA ACTTCGCCATGTACTACTCGCACACGCAGGCCAGGGCCAAACTGCCAAAG AAGCGGAGACGAGTGCTTCCCGTCGAGCAGCCGCGCCAGCCCAGACTGCC AGGTGCCCCTGGTGGTGTCAGTGGTTGCGGTACCCCGGGCTCGGGTCCCC ACTCCGGTCCCATGGGATCCGGCGGTACTGGACCACGTCGCATGAACAAT AAAACAAAGGACCTGGTCAGCCCCAAGTCAGGTCCGCTGGGCGCAAGCAT TGTGGCCATGAGTCCCCGGACAATGCTGGATCTCAATCCTGCCCTGGCGA TGGGCAAGCCTACGTTTCAGCCCCGTATACCCACCCCCCTGGCAGCCACG CCCCCTCCCCCCGTGAGTTCCGCTGGGGGGATGACAGCGTCTGGAATTGG AACTACTTCAGCCACTGGAGCCACTAGTGCACCACAACCAGCAACACCAC TACCCAGCATTGCGGTGTCCACCACAGCGAGTGTGGGCAAGGATTTGGGC ATCTCGACCACCACCACCACGGCCCAGGAGACCAGCAAGAAGGCCTTCCT CTAAAGGAGCAGCCCAGCCAAGGATTCAGCCACCTGCTATTTATATTTAT CCACGATCCCCATATCCTCCAATAAGCAATATCTATTCGATGTCATACAG AGCCTTCGCATACGTATTCACTAAGAACAAAGATGGTGTGTTTCAAAGTT AGCAAAAGGATCCTAACCTACTCGTATCACTTGAGATCGTCTTTGTTTTC CTCATATCATCACACACTGTGTTTCGCAAAGCCTCATATCGAAAAATATC GAAATGAATATCATATATTCACGAACGAGTCTACAATGGATCAGAATTAG CTGGAGATCAATCTTAAATCAAATATCGATTGTGATGCTATATTATGAAA AGTATTCTTTGATTTCAGAAGGGGTTTAGGATATTACTCTATATAAGCCA TTTGACTGTTATTATATATTAGTTGCTTACTTTTATATATCGAATCCTAT GTAATATCTCACACTGAAATGAAAAGGCCAATATTAAAGCAATACTTTGG TTCAAGACCAATTATACACCTAGCTAAAAATTACCATTCTGTTTAATCCA GCAATAAAATATGTTTTTAACCTTATATATTCGTACTCTAGTAATGATCT ATCCATCTCTGATACCTAGACTCGCAATTTGTGTTGACCATATCACGACA TACCTATACCTATCAATATCGAACCTAAGCATAAGCATTTGCTAAATATA GATAATCCAATTGCTTGACGCCAACAATTTATCATCGAGAGTTAACCAAG ACAGAGCGGAAACCATGTTTTTAACCATACAAAGTGTTTTTACCGATTGC AAGCTTGCTAACGATCCATTTTTCTATATAAGCCATAGATATTAAATCGA CAAGCAGTGTAAATAATCCAAAATGCTTTACAACTCGGTTTGCCAGTTCC TTATGCGTTGTGTAAAGACTCTACTGCCCCCAATCAGTTCTCGTGGGGCA GGGGCAGTTCGGTTGAAAGCTTTAATTTGATATATATTTACTATATAGAG GGGGAATCCAACTCAAACGCGGTTTGAGAAGCTTAATTAAACAGAAACCA ATCAAAAAGTACATCTACTTTTTTAAAATTCATTCGGGCCCAGCGCACGT GTTGACTTCAACTTTTTCCCGAACTAAAAATAGGAAAGGTGCTGATTTCT TTAGCGAAAGACGCAAAAGTTTGCGGGGAAAAAAATTGAAGCCAAAGAAA AACAAATGAAATTTTCCAACTGTTGGCACTTTTCGCTCATCACTCACTTA CATGCTGGGATTACTCGGTAAGCTGGGAGTAAAATCGCTTCTTATATTTT TCCAGCCCGAAAAGTTGGCTCACATATCAACAAGCTAGGGAAACTTAAAG AAAATTTCAAATTTCCGTCAGTTAAAATGCAAATTATTTCTATTAAATTT TGTTTGGTTCTCCGCAAGCAACGACTTCCCTGAATAAATGCAAAACAAAC AAAAAAATCCAGAAGCGGCAGGGAATTCCTTACAGTTCCTTTCAGTTAAC TTGAAATTGTTAAGAAAGTTTACAAATTGCTGTGGGGTTAAGTGGGTGGA TTTAGTCCAAAAACTCACAGGGCTGGTTAAAAAAAAAAAAGCAAACAGGT TAGCAAATTGTTTTTCCCCAATTTTCCTTTGATTTCACTTGCGCAAGTCA TTAGCTAATTCTCTTGTACATTTTGAATATATATATATACATATATCTCT CTCAGCAGTCATTTTGCCCACATAATTGTAAGAATAAACATGATAATTAC TGAAAACAAAAAGTGGAACAAAAAGAAGCGGAAGAATAAGATGCAAAACT TAAGCAACATTAAGATCGAAGATGGGCAACAAATAAACGATGTTTGGGAA ACATTTGTTAAGTTTTTATAATGAACAAAGCATTAATAATAACGAAATTA ATATTAAATATTGCAAGCTATAGGAAATGGATACAAACAATTGTTTATAT CGTTTCGTTTTCTCGCTATGATTTCGAAACAGTTTTTTAATTGTATAGTT AAGCAAATTGTATACTATTTGAACTAAACAAAACAAATTGTTCTCTCAAT AATTCTTGAACAAAGAAAATTAAGCTAATTATATATACATTTATATATAT AATTGAACAAATATATATATATATGAATTT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Shaw-RA FBtr0089274 3086 Shaw-RB FBtr0089275 2840 Shaw-RC FBtr0289989 2428 Shaw-RD FBtr0332184 4557
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Shaw-PE FBpp0304494 598
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Shaw-PA FBpp0088331 498 Shaw-PB FBpp0088332 604 Shaw-PC FBpp0288427 619 Shaw-PD FBpp0304493 510
Comments
	Extended 3' UTR based on RNA-Seq and/or EST data.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001273072
Synonyms
	Shaw-RE
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]