Transcript Dmel\Syt1-RG

General Information
Symbol	Dmel\Syt1-RG	Species	D. melanogaster
Annotation Symbol	CG3139-RG	FlyBase ID	FBtr0332220
Feature type	mRNA	Associated gene	Dmel\Syt1

Evidence Rank	Weakly Supported	Length (nt)	6857
Evidence Score	3

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 96 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	153665 CK00462 EC00403 EC052820 EK010759 EK023202 EK025302 EK044120 EK048423 EK049916 EK052539 EK057907 EK058921 EK060659 EK061338 EK066557 EK068431 EK070704 EK089819 EK093248 EK093259 EK093264 EK097216 EK105812 EK119662 EK125749 EK129949 EK135661 EK140159 EK146950 EK149003 EK150159 EK151655 EK155757 EK165503 EK170364 EK170413 EK175109 EK179559 EK179741 EK181921 EK183907 EK193151 EK198854 EK200317 EK201934 EK204917 EK207612 EK222827 EK226243 EK234178 EK236743 EK243052 EK246524 EK253801 EK253922 EK256111 EK257223 EK267906 EK274260 EK279312 EK280610 EK294449 EK302205 EK302646 EK307423 EK308415 EK308452 EP08809 EP14316 GH15352 GH19345 GH26906 HL01912 HL02156 RE15763 RE35888 RE42419 RE52285 RE60951 RE61681 RE62014 RH29919 RH42339 RH52778 RH62689
End(s) extend beyond the annotated transcript, internally consistent	EK044356 EK069709 EK133962 EK153643 EK183261 EK211747 EK242651 EK260314 EK295346 EP04411
Sequence
	GTGTGGGCCAAAACGCGAATGAACATCGACCGTGGAAGTTGACTGCTGAA GTACAAAGCGCTAGGCTGAAGTATACGAAATTCATGTGAGACTAGCGAGC CGCGGCCTCACTAGCCAAAGCCAGTCACAAAAAACCAAAAACATAAATCA GGCAGCAGCAGCAGCACACATACATCGACAAGCGCCAGGACCCGCATCAC CATATCCTTCCTGCCAAATAGTCGCCACTGCTGCCGACCCTCCCCGCTCC CCTCGCAGGAGTCACGCTTCGTTAAACGCTGCTCAAAACCCATCATCCTA ACTAATAAAGCGGACGATAAACAAGCGAATTAAGTACCAAAAACGACCGA GCTATTAACGCTAGTCTGGATCCCAATTGCTGATTGGAAAGGAGAAACAT TGGCAGCATTTCTGATTAGGGGCAACAACACAGCAAAACAAAATGCCGCC AAATGCAAAATCGGAAACGGACGCCAAACCGGAAGCGGAACCAGCGCCAG CGTCTGAGCCGGCAGCGGATCTGGAGTCCGTGGACCAGAAGCTGGAAGAA ACACATCACTCCAAATTCCGTGAAGTGGACAGGCAGGAGCAGGAGGTGCT CGCCGAGAAGGCGGCGGAAGCGGCCAGTCAAAGAATCGCACAGGTGGAAT CAACAACACGGAGTGCTACCACAGAGGCTCAGGAATCCACCACCACCGCA GTGCCGGTGATCAAAAAGATCGAGCATGTCGGCGAAGTGGTCACCGAGGT GATCGCGGAGCGCACGGGGCTGCCCACATGGGGCGTGGTGGCCATCATCA TACTCGTGTTCCTCGTCGTCTTTGGTATAATCTTCTTCTGTGTGCGGAGA TTCCTGAAGAAGCGAAGAACCAAAGATGGAAAGGGTAAGAAGGGTGTCGA CATGAAGTCGGTACAGTTGTTGGGATCGGCGTACAAGGAGAAAGTTCAGC CTGATATGGAGGAACTCACCGAAAATGCCGAGGAGGGTGACGAGGAGGAC AAGCAGAGCGAGCAGAAGCTGGGGCGCCTCAACTTCAAGCTGGAATACGA TTTCAACTCCAACAGTTTGGCCGTGACGGTGATCCAAGCCGAGGAGCTTC CCGCCCTGGATATGGGCGGTACCTCGGATCCCTATGTCAAGGTGTACTTG CTGCCCGACAAGAAGAAGAAGTTCGAGACCAAGGTGCACCGCAAGACACT GAGTCCGGTCTTCAACGAGACGTTCACCTTTAAGAGTTTGCCCTACGCCG ATGCCATGAACAAGACGCTCGTGTTTGCCATTTTCGACTTCGATCGCTTC TCGAAGCACGACCAGATCGGCGAGGTGAAGGTGCCGCTGTGCACCATCGA TCTGGCGCAGACAATCGAGGAGTGGCGCGACCTGGTCAGCGTTGAAGGAG AGGGCGGACAGGTGGTCTTGCGAGAAGTCAACATCTAAGCCAAGTTAAAT CCAGCGAATGCTTAAGCCTGGCCCAATACCATTATGCCACAAAAAATAGG CATAAGCTTTATTACCAGACTAATACTGTAACTTTTCCTACTATGAATAT TAAAACTTACTTACAGTTAGCTTAGAAACACTGCAAATATATCATTCTGA ACAATTTTTACTCTACTGCATGCCTTTCCTTTTGCTTACGACTTTATACC GATATATAACTCACACTAAGTATTAGAAATCCACACGAAAACATTGAACA CGGACATGCGACCATTGATTGGTTACAAAACTATACGAAATTTGCAAAAA CCACATTGAAACTTATCAAAATTCTACTGGAAATGGAATTCAATGATTTT TAATACGCTCTTCATTTTTCTCTTTAATTATTTTTGAACGTATCGCTAAA AAATCAAAAAAAAAAAAAAAAAAAAAAAAAACAAATCAAAAACAAATCCA AATCTGTAATCACAAAATTCGAAAACTCGAAATTTCCAAACTGTACTCGA AATTTTTGACTCATGCCATGGGGAAATCAATCCGAAACCTGAAACATGCC CAAAAATCCATGAAAAGCTGGGAGATATCTGCTTCTCGCTGCGCTACGTG CCGACCGCCGGAAAGCTAACCGTCGTCATCCTAGAGGCCAAGAACTTGAA GAAGATGGACGTGGGCGGATTGTCTGATCCATATGTGAAAATTGCAATCA TGCAAAATGGCAAACGTTTGAAAAAGAAGAAGACAAGTATCAAAAAATGC ACCCTCAACCCTTACTATAATGAGTCGTTCTCATTTGAAGTACCATTTGA ACAAATACAAGTATGCGAGAATGTATTATACTATCCTATAAATACCACAA CTACTACTACTCTACTACTATACTACTACTGCCTACTGCCTATACAAACT ACCTACTACTACTACTACTATTACTGTTACTACTGTTACTACTGTCCTCT TCTGAACTATCTACCAAAGAAACCAAACCAAACCGAGTTTTGAGTACCCA ACCTCCCTCTAAACACACACTAGCCTACTTACGTGCAATCGTTGTTGTTA ATTATACTACATATATACCGTATATATATATATATATCCATATATTGAAT ACTTGTATTCCGAAACAAGCGACAACAACACCAAACTCTGAACCAAACAA CCGAACACTTTTAGAGACCAATCTTCGTATTACCCATAAAGATATCTAAA CTTCCCCCAAAAACTAACTTAATCAATCTTTGTGTTCTATCAAAAATCCC CTAAAAAAACAAAAAAAAAAGTATTCAATGTTAAATGTTGTAATTTTAAC CAAAATTTGTTCGAGCTTCTTTTATGTTTGATAATCCCTGATTTACTATT GTAAATATGCAAAACGGAAACTGAAAGCCCAACAAATTTAGCAAATATTT TAGTTTGTTGCCTTTGTTTGTGTAGTCTTTGAGAAATTTTTGTGGAATCT GATTTCTGTTCTGAATTTGAGTTTTAAACAGCCTCGATGTGTGCTTAGCC CAGCTGATTTGGTTTATGTTTTAGTTGTTAAATGTGTAATGATCGATTTG AAGACAATCTGGCAAGCGGTAAAGCAATGACAATCAGGCATGCCTAGTGG CTTAGGAATCCGTAAACTCCGGCAATCTAGTTGCCCCAATTCACACACCG TCTTAGATGACATTTTGAATGGAGAGCAAGCCGTAGTGTGCCCGCTTCGC TCGCAACCGAGCAAAAAGCAGCCAAGCAGAAAAGCATAAGCATAAAAAGC ATAAAGCATTAGCGTCCAAGCAGTCGAGCAGAAAAGCATAAACGCAAGAA TGCAGCCAAGCACGAGCCTTACACACACTACGCTCACTCCAGAGAACTAC AGTGAATACAACCTAATACAAATTCGAATACCAACTTAAACTACTCTTTC CATAATACAAACTATCGCAAACTCCTATACCAGCGGCGTCAATAATGCAC CACGCAGCAACCAAATCGCAGTGGGTACATTATTTTGACACTGTCTTCTG ATTTGAATATCGAATACCAATCGCACCACAACAGCTACAGTACAAATACA GTTTACACAGAATAAATACCCAAATGCCAACACAGAGAAGTATAGCGTAT CACCATGAATACCAATCATACCAATCAAACCAACATATAGCCAAGCGATC TGGAAAACGGGGAGAACTCTGTTACGGTTACGTTACGTGTGCTAGTCGAA GAGTTAGCCCCCTGTCTATAAGTAGGACCCCCATGCCATGACCAATTACC AAAGAACGACGAATGGGATTGAATATTATACATTTTCGTTTACACGTATT TAATGAACATTTTTCTTTTTGCCACAGCTTAAGTGTCTGCTATCAAGTAT CGAGAAAAGTAATTTGTTCATTAGTCCCCGAGGTTAAAGGTGGCGAGATA ACATATATATTCTCGTCCCTACATAAATCCGAATCTGCCGACATCTTCAT ATGCTTCTCACCTTACGCAAATCAAAAGCTTTTAGGAATTTCTTGAGTTT CGTTATCAACATTTATTATTTTAAGCTACTCATTCTTAGCCTTAGACATT TGCATGATCTGCTTGTTAATTCACAATCAAAAAAAATATGAACACCATAA GGGAATACTACTCCACAGCAAGCAAATTCCTCGCCGAAGGAGCTTTTTGT AATGCTTGAACGCCCTTTAGATGTTAAACCCAAATCGAAAGTGCTTGTGC AAACTGGAAGTATTCCACCCGACGATCTCCACGATTAAATCTAGCCTGCA CTATAACTAATATACAGCACTCAAAAGCCGAAAATATTCCACGTAGTGCC GAAAACCTCTGTCTATAACCTGCTTCCCAGTACAGCATTCGTAGTGTCTG CCTGTTAGCGAACAACAGTTCCCACTTCAATCCCCCAAAAAAAAAAAACA ACTTGAAACCCAAACAGAACACGTATATCGAAATACCGAAAAGTTCTTCA ACTCAAAAGCGAAGCCCCCTCCCGTTCAAAAGAGATATAGACCGAATCGA AAGTAGCCGCATCCAGAATATCCCTACTAATGCCGTTCCTTTCCTTGAAC CCTCTTCCTCCAAATCGCGCACAGAAAATCTGTCTCGTTGTGACCGTCGT GGACTACGATCGTATTGGCACCTCCGAACCCATCGGCCGCTGCATACTTG GCTGCATGGGCACCGGAACCGAGCTGCGTCACTGGTCGGACATGTTGGCC TCGCCCCGCCGGCCCATCGCCCAGTGGCACACCCTCAAGGATCCCGAGGA GACCGACGAGATCCTGAAGAACATGAAGTAAGGCGGCAACATGGATAACC AAATGCAGACTTACAGCACATCTATCAAACGTATAAATGTAACCAAAGAA CATGTACGCGAACCGTCAGACATTGAAATCGAATGCATCATCATCAGCTA CAAAACGATCCTCCTCACCCGAAACGACAAGCAACAATCAGCGAAATATC GTAGTTAATGCAAAAATTGTTCATCTATGCAGTTATCTCAACATAAACAT ACTGGAACACACAAAATGCCGATTAAGTAATACCATAGGTGTCTAAGTTA TATCTCATTGGTTGCGAAAGCAAAGCGAAGTGAAAGCTATGAAATCCTAT ATAGAAAGCAATGTGCAATGTGTCCCTTTCACTGGCCGGAATCCCAAATA GTTCGATCGATTTTACATATAAATCCACACATGAATTCATTCCGAGATCT ATGAATTTGTTGTTGTCCCAAACTATGAAATTTACGAGTATGTTCTTATT AAATGCAAAACTCTATATACTCAAACTATTTAACGGATGACCGCGAGAGT ATGATTTTTAAAGGTTAAGTTTACTTTCGTTTTTAACTTAGTGCAATGAT TAAAGGGATCTTTCCGGTTTTAAATTTGTTTTTCAATCGTTGAAAGATTA CTAGTGAATAATATTACTGACTAATGAATATATAAACAAACAAGCAAGCA AAACAAGAACGTAAAGGCAACTTAAACTGTTATGTAAATTATTTATTATG TTTATTGAGCATTACGTACTTAACTGTGTAAGTATTAATCTATGTGTGTG TTTAAACGAAGTGAACATGGCAGACATATTAACATGAGGACGGAAGGGAA ATCATAAAATATATATTATATATAAATATTATGTATAACGACCTAACAGA ATCAGACGAATAAGTAGAGGGGAAACCAAAAAGGAAACCGAAAACCAAAA GCAAATAACAAAAGTTAAACTTTGAAGCGTGATTTCAACGGAATATATCA TCAGTTTAAACTTAAAGAAAATATCGAACATTTTGCACAATGGATCAGAT TGGAATATTCATTTAGTTCGAACAACTTGATTTACGCTAACTTAGTAGAA ATATGGCTCAGTTTGGGAAAGGTTTCCATTTCCGATAAGTTTATCCCTCG GTTAGCTTTGAATTTTCGTTCGAATTCAGATTTTTTGTTCGGTAGCTTCT TCTTCTCGAATATTAAGGTTTCTATTGTACAACTATCTATGAGTCGTTTT ACTCGTTTCCGACTTTATCACATTCCCTGATTTAGAAATCATATTAGGAC CTAATGAAAATATACATACTAACTAAATGATTATGGCAAAATGTTAAAAC AGAAAAAGAAATATTAAGAACAATAATAGTTATTACTATTTATATTATAT TCAAGTATATGACATCTAAACAATATACATTTATATAAACTTGTGCTCCT AGCTGCACAAGCCTACTAAGAATTTGGGATTTTTAATATGGAAAAGCGGC GGCAGCAAAAACTCTTCTACCTACCTAAAACACAAACTAGCTAATTAAGC TAACTAATCGCTCGAGAGCCGAGCATTCCATTATTTATAATCCGATATTG AAATCGAAATCGAATTCGAGACGAAGGATTAACAGTGAGCCATGATTTTC TGATTTTTTCCATATTGAAAGTAAATGAAATTCAACTAATACATTAGATG TTTTTGTCCTGTAAATGGTATATTATAATGATAATGATAAAGATAAAGCG TAGTTAGGGATCTGTGTATCCCCTGTACACCCACTTACACAGTTGTAGTT ATGTTCACTGAAGCAGAAGAGTTATGCGTAGGAGTACACAAAGAACAAAG AATGCAAACTTACAAATCGAGAAAATACCAAAAATATTTATGTAATATAA TTCATCTAAATTTAACAAAACGACGTGGACGCCAGGAAGAACAAGTTATG CAACTTATTACGAGTATTGTTCAATAAAAATAAATAACTTTGCTTTTCCA AATAATTACTGTAAATTATCTCAAGCCCAAAAACAGCAAAATAAGACACA GATACAAAATTCACACACACACACACACACCCACAAACACATATGTATTA TGTATTAAAGAAATGGTAAATTACTAACCAAAATCGAAGCCTAACCACAA CAGCAAC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Syt1-RA FBtr0077726 3993 Syt1-RB FBtr0077727 3987 Syt1-RC FBtr0077728 5110 Syt1-RE FBtr0332218 5196 Syt1-RF FBtr0332219 4548
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Syt1-PG FBpp0304525 331
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Syt1-PA FBpp0077410 474 Syt1-PB FBpp0077411 472 Syt1-PC FBpp0077412 472 Syt1-PE FBpp0304523 472 Syt1-PF FBpp0304524 170
Comments
	Evidence supports alternative splice leading to premature stop codon and/or downstream start; may or may not produce functional polypeptide.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001273037
Synonyms
	Syt1-RG
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]