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General Information
Symbol
Dmel\CLIP-190-RR
Species
D. melanogaster
Annotation Symbol
CG5020-RR
FlyBase ID
FBtr0332453
Feature type
Associated gene
Evidence Rank
Length (nt)
5283
Evidence Score
Genomic Location
cDNA Clones Consistent with the Transcript ( 26 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        TAACAAAGAACATTAATTTCACAATTCAAGAAAAGGGGTTTTTACCGATTTCCACTTTTATACGCGAGTTCTTCACTTAT
        AAAACAGTTGGAAGAAGTCTGATAATTGAATTGCTCTCCGGAAAATATCGCAGTAAAATATGTTTCAATAGTATAGCCCA
        CCACTATACTATCACCAAGTACTCATGAAGGTTAATATTAAAAAATGTACCCACATTCAAATGGGAAAACAGAAACCCAA
        AAAGAATGAAGCCACCAGCATGAGTCGTGAAAGCGATGACAATTTAAGTTCGATCAATTCGGCTTATACAGATAACAGCA
        GCGCCGTGCTGACAGCAAACACAGAGCAGTTCATCATTGGACAGCGGGTTTGGCTGGGTGGCACTCGTCCCGGACAGATT
        GCCTTCATTGGAGACACACACTTTGCTGCTGGCGAATGGGCGGGTGTTGTCCTTGACGAGCCTAATGGTAAAAACGATGG
        CTGTGTGTCGGGCAAAAGGTACTTCCAGTGCGAGCCGAAACGAGGCATTTTCTCACGCCTCACACGTCTTACCACATATC
        CCTTGGCCGGAGCCCAGACTCCGACCTCTCCATTGGCCAAAAGCTCCCCAGACAGATCGCGCACAGTTTCTCCAACTGCG
        AGTATTCGCAGCTCTATGCTTCGCAGTCCCGGCATTGGAGGCAAGAATGGAATGGCTGTGGGCGATCGTGTGATTGTCTC
        TTCTGGATTTGGTAGTCGTCCTGGTATCTTACGCTATTTGGGAGAGACACAGTTTGCTCCCGGCAACTGGTGCGGTGTGG
        AATTGGATGAGCCTAGCGGCAAAAACGATGGAACTGTCGATGATATCAGATACTTTGAGTGCAAGCCCAAGTACGGGGTG
        TTTGTACCTATTGCGAAGGTTTCACTGTCGCCGTCGTCCAAGAAAACGCGTCTTTCCAGGACCGGATCAAGGGAGTCGCT
        CACCTCGATTGGCACCATGAACAGCATCGCCACCACGGCCACGTCGCGCATGCGCATGAATGCTCAGGATCTGCTGCGCG
        AGAAGCAACAACATGTGGAGAAGCTGATGGTGGAGCGCGACCTGGACCGCGAGGATGCCCAGAACCAGGCGCTGCAGCTG
        CAGAAGAACATCAACGAGCTAAAAGCAAGAATCGTTGAATTGGAGTCGGCATTGGACAATGAACGAAAGAAAACTGAAGA
        ATTGCAGTGCTCCATAGACGAAGCCCAGTTTTGTGGCGATGAATTGAATGCTCAGTCACAGGTTTACAAGGAAAAAATCC
        ATGATCTGGAGTCAAAAATCACAAAACTGGTGTCCGCCACGCCAAGCCTACAAAGTATACTACCGCCCGATCTACCTTCA
        GACGATGGTGCTTTGCAGGAGGAAATCGCCAAGCTGCAGGAAAAGATGACCATTCAGCAGAAGGAGGTTGAATCTCGGAT
        TGCGGAACAGCTGGAGGAGGAGCAGCGGTTGAGGGAAAATGTAAAGTACCTTAATGAGCAAATCGCCACTCTACAGTCCG
        AGTTGGTGTCCAAAGATGAGGCCCTGGAGAAATTCTCCCTCTCGGAATGTGGCATCGAGAATCTCCGAAGGGAACTCGAA
        CTTCTCAAGGAGGAGAACGAAAAGCAAGCTCAGGAGGCTCAGGCTGAGTTCACCCGAAAACTAGCCGAAAAATCCGTAGA
        GGTGTTAAGATTAAGCTCTGAATTGCAAAACTTGAAGGCAACATCCGATTCCCTGGAAAGCGAAAGGGTTAACAAAACCG
        ACGAATGTGAAATTCTTCAAACCGAAGTACGAATGCGGGATGAGCAAATCAGAGAGCTAAACCAACAACTCGATGAGGTT
        ACCACACAACTAAATGTACAAAAAGCGGATAGTTCTGCTCTGGATGATATGCTTCGATTGCAAAAGGAGGGTACTGAAGA
        AAAATCTACTCTTTTAGAGAAAACCGAAAAGGAGCTAGTTCAAAGCAAAGAACAAGCTGCGAAAACTCTAAATGATAAGG
        AACAACTTGAAAAACAGATATCAGATTTAAAGCAATTGGCGGAACAAGAAAAACTAGTCAGGGAAATGACTGAAAATGCA
        ATCAATCAAATACAACTAGAAAAAGAATCCATAGAACAGCAATTGGCTTTAAAACAAAACGAACTTGAGGACTTCCAAAA
        GAAACAGTCAGAATCGGAAGTTCATCTTCAGGAAATCAAAGCTCAGAACACGCAGAAGGATTTTGAATTAGTTGAATCTG
        GTGAGTCCCTTAAAAAACTGCAACAGCAATTGGAGCAGAAAACTTTGGGTCATGAAAAACTGCAAGCTGCTTTGGAAGAA
        CTAAAGAAAGAAAAGGAAACGATCATAAAGGAAAAGGAGCAGGAGCTCCAGCAGCTCCAAAGCAAGTCAGCTGAATCCGA
        AAGTGCTTTAAAAGTCGTACAAGTACAACTAGAGCAACTCCAGCAACAGGCTGCCGCATCTGGAGAAGAGGGATCCAAAA
        CTGTGGCCAAATTGCACGATGAGATTAGTCAGCTTAAGTCCCAAGCTGAAGAAACTCAGTCCGAGTTAAAATCCACCCAA
        TCCAACTTGGAAGCCAAAAGCAAACAATTGGAGGCAGCAAATGGCAGCCTAGAAGAGGAAGCCAAGAAGTCAGGCCATCT
        GCTGGAACAGATTACCAAACTTAAATCTGAAGTAGGGGAGACGCAGGCAGCTCTCAGTTCATGTCATACGGATGTGGAAT
        CCAAAACTAAGCAACTTGAAGCCGCAAATGCAGCTCTGGAGAAGGTCAACAAGGAATACGCGGAATCCCGAGCGGAGGCT
        TCTGATCTGCAAGATAAGGTGAAGGAGATCACCGATACGCTACATGCTGAGCTTCAAGCTGAACGATCGTCCTCCAGTGC
        TCTCCATACTAAGCTGTCCAAGTTCTCGGATGAAATAGCTACCGGCCACAAGGAACTGACCAGCAAAGCCGATGCCTGGA
        GCCAGGAGATGCTGCAAAAAGAGAAGGAACTACAGGAGCTGCGACAGCAACTTCAAGATAGTCAAGACTCTCAAACAAAG
        CTGAAAGCAGAGGGAGAGCGGAAAGAAAAGTCTTTCGAGGAATCTATAAAGAATCTTCAGGAAGAAGTCACTAAGGCCAA
        GACGGAGAATCTAGAGCTAAGCACTGGCACACAGACGACCATAAAGGACCTGCAGGAGCGACTGGAAATCACCAATGCTG
        AGCTCCAGCACAAGGAAAAAATGGCAAGCGAAGATGCGCAGAAGATTGCCGACCTTAAGACCCTTGTGGAAGCCATCCAG
        GTGGCTAATGCCAATATATCAGCTACAAATGCGGAGCTCTCCACTGTATTGGAAGTTCTTCAGGCGGAGAAGAGTGAAAC
        AAATCACATATTCGAGCTCTTTGAAATGGAAGCCGATATGAACTCAGAGCGGTTGATCGAAAAAGTTACTGGGATTAAGG
        AGGAACTAAAGGAAACCCATCTGCAACTGGATGAGCGACAGAAAAAGTTCGAGGAGTTGGAGGAGAAATTGAAGCAAGCT
        CAGCAAAGTGAACAAAAGTTGCAACAGGAGTCTCAGACTTCCAAGGAGAAACTTACGGAAATACAACAATCCTTGCAAGA
        ACTCCAAGATTCTGTAAAGCAAAAGGAAGAACTTGTCCAGAACTTGGAAGAAAAGGTTAGGGAAAGCAGTTCCATCATAG
        AAGCGCAGAACACGAAACTAAATGAAAGCAATGTTCAGTTGGAAAACAAAACTTCTTGTTTAAAGGAAACCCAAGATCAA
        TTGCTAGAGTCACAGAAGAAGGAGAAACAATTGCAGGAAGAGGCTGCCAAACTTTCCGGTGAGCTGCAGCAAGTGCAAGA
        GGCCAATGGAGACATAAAGGATTCCCTAGTAAAAGTAGAGGAACTAGTAAAGGTGTTGGAGGAAAAACTCCAAGCAGCCA
        CCTCCCAGTTGGATGCCCAACAAGCCACAAATAAGGAACTCCAGGAGTTGCTGGTTAAATCTCAAGAAAACGAGGGAAAT
        CTGCAAGGAGAATCTTTGGCAGTCACTGAGAAACTACAACAACTGGAGCAAGCAAATGGGGAGCTTAAGGAGGCTCTGTG
        TCAAAAAGAGAATGGCCTTAAAGAACTTCAGGGCAAACTTGATGAAAGTAATACTGTATTAGAAAGTCAAAAGAAGAGCC
        ACAACGAAATTCAGGATAAGTTAGAACAGGCCCAGCAAAAGGAGAGGACTCTTCAAGAGGAAACATCCAAGTTGGCGGAG
        CAACTGAGCCAATTAAAGCAGGCTAATGAAGAGCTCCAGAAATCCCTTCAGCAAAAGCAGTTACTTTTGGAAAAGGGTAA
        TGAATTCGACACCCAGCTGGCAGAATATCAGAAAGTCATTGATGAGATGGATGATGCGGCTTCCGTTAAATCCGCGCTGC
        TGGAACAGCTACAAAATAGAGTTGCGGAACTGGAGACCGCACTCCGTCAAGCCAACGATGCCCAAAAGACTGCTTATCTG
        GAGACTAAGGAACTGAGGCGCCAGCTGGAATCGCTGGAACTGGAGAAGTCGAGGGAGGTTCTGAGCCTAAAGGCTCAGAT
        GAATGGTGCGAGCAGTAGGTCCGGAAAGGGTGATGAAGTGGAGTCACTGGACATCGAAACCAGTCTTGCCAAGATTAACT
        TCCTGAACTCAATTATTGCTGACATGCAGCAGAAGAATGATGCACTCAAGGCAAAGGTGCAGACCCTTGAAACCTTGCCA
        ATGGATTTCACCAAACCTCATGCCTTCGATGCCCTGACAAAGCGGAAACCGGCTCCCAGACTTTTCTGCGACATCTGCGA
        TGAGTTTGATCAGCACGATACGGAGGATTGTCCAATCCAGGGAAGCGAAGATCAAGACTACTCCACACCGTCATCCGAGT
        CCAACAACAACGAGAAGGAGCGGAAGCTGCCGGCACCCAGGAAATACTGTGATTCCTGCGAGGTTTTTGGCCACGATACG
        AGCGAATGTGCCGATGATGAAACCTATTAGTTAGCTCTAGTTAAATTCTATTATTTCCATTTTACTTTGTTTTAGACTCT
        ATAGCATAACCATATTGCGAGATCTATCAGATGAGATACTTTTACCTCAGCAGAGCTTCACTCAATCACACAAAGAAATT
        TCTCTACTTAAAATTGTGATCTTGCGTTATGCACACATCCATGGATAGTAGTCTATTTTAAATTGTTTTTATTTATTGAA
        TGCGATTCGTGGCAAACACACAATCGGTTGTTTTCGTAATTTTTGAGTGTAAACATAGTGTAAAAAATAAAATCAAGAAC
        GTG
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0080976
        5917
        FBtr0080975
        5625
        FBtr0080977
        5453
        FBtr0290262
        1723
        FBtr0290263
        1615
        FBtr0301440
        5851
        FBtr0301441
        5291
        FBtr0301442
        2664
        FBtr0332451
        5349
        FBtr0332452
        1900
        FBtr0332454
        5806
        FBtr0332455
        1549
        FBtr0339796
        1357
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0304726
        1601
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0080529
        1690
        FBpp0080528
        1689
        FBpp0080530
        1652
        FBpp0288701
        365
        FBpp0288702
        328
        FBpp0290655
        1668
        FBpp0290656
        1598
        FBpp0290657
        456
        FBpp0304724
        1623
        FBpp0304725
        311
        FBpp0304727
        1653
        FBpp0304728
        306
        FBpp0308841
        327
        Comments
        Transcript terminates at site supported by polyadenylated cDNA.
        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        CLIP-190-RR
        Secondary FlyBase IDs
          References (0)