FlyBase Transcript Report: Dmel\Cog1-RB

General Information

Symbol

Dmel\Cog1-RB

Species

D. melanogaster

Annotation Symbol

CG4848-RB

FlyBase ID

FBtr0334596

Feature type

mRNA

Associated gene

Dmel\Cog1

Evidence Rank

Length (nt)

2973

Evidence Score

Genomic Location

Genomic Maps

JBrowse

cDNA Clones Consistent with the Transcript ( 74 )

cDNA Clones, Fully Sequenced

Exact Match

Contained within the annotated transcript, internally consistent

End(s) extend beyond the annotated transcript, internally consistent

cDNA Clones, End Sequence Only (ESTs)

Contained within the annotated transcript, internally consistent

End(s) extend beyond the annotated transcript, internally consistent

Sequence

Sequence Downloader

CATCGATACATAATTCGATTTTATTACAGCTGCTCCCTTGTTATTGTTTTCTTAATTTAAATAAAACTAATTTGACGGCT
AAATGACGGCCAATTTGTTAAACCTGAACGTGGACACGCTGTTTGAGCAGCACAGCGTGTCCGAGATAGACGAGGTGCAC
AAAAAGATCCAGTCGGTGGTGGAGAACAAGCGCGAGGAGTTGCGCACTCATGTCGGGGAGCGGTACCGAGATCTTTTGCA
GGCGGCTGACACCATTGCTGCGATGCAAACGTCGGCCGGGACACTTATGGAGCAAGTGCGACACGTGCAGGCCAATTGCC
GCAGTCTAAACGAGCAGCAGCTCCTGGGCTTCCAGTCAACTGCCAATGCAAGTGCTAAAGATGCCGCACTGAAGGAGAGG
AACGCCGGAAAAAAGCTGCAGACCTACTACGGCACCATGGCTCAGATTAAGTTGCTTACTGCCCTGCCGGAACTAATCTG
GACGCACTTGGACAACGATCGCTTCTATGCCGCTACTGAGTTGTTCATCTTCAGTCGCCACATCAGCACGGGCTTGCAAC
TGGACGGCCAGAGTGCCCTGATGCAGAAACTACCGGTAGCGCGCAAGCAATGGGAAATCCTGCGTCCCTTTCACGTGACC
ATCAAACAAGCCATACTGACCGCACTGGAGAGGGAGGAACTCCTACAAGAAATGACTGTGGACTGCCTGCAGAGCCTTCT
CTTGCTAGACAAAAGCGATTTGAGTACTGTGCTGAAATCCTTCTTGAACCTGCGCTCCTCAGCCTTTCTGAACTGCCTGC
AAAGCGGTCCATCGGAGCCACGTCGCGTCAAGGATCGCATTTTGGCTAGCTTAAACGTGCTCAACAGCACCGTGGAGCTT
CTGGACAAGTGTCTTTTGGGTTATAGCCTTCTTTTTAGCCGCTTGGAGGAGTGTGCCTCTTCTACGTGTCCACCCAGCAT
CAACCGAATGGAGAGTAGCGAGCGCCAGCTGGTTCATCTTTTACCCGAAATCATCGCTGGTTTTAAGCCACAATTTGATG
TACCTCAGCTAACACCTGAGCAGTTGGGTTCTTCACTTCAACAATGGCTAGATAAAATGAACGCCTTGGCAGCGGCTCAC
TTGCAGCAAGTCTTTGCACTAGTCACCAACATGCAGACCATCCAGGACATTAAGTCCGCGGCCAGAACTAATGGTCGACC
GGATTTCGTTCGCCTAGAACAGCAATTGCATCTTAAGCGTAGCCAGTTAGACTTCTACGCCAGAAAGTACGTGCCGTTGA
TCAACGCCAGAGTACGAGAGATAATTCGCAGCAGCTGGGCTTCCGCCATGAAGCTGACCTACGAACAGGTACTATTGCTT
ATTGAAGCCGGTCAGTCGCAACCGCCTCTACAAATTTGGCGGGAGCAGAGCGATGATTTGCCTTTAAGCTTGGCGGCAGC
ACTCAGCGATCAACCAAAGCGACTGGCAAATCGGACGAAGGGCTATGACGGCGCAACAATAGAACTGTGTAAACGTTTTG
ACTCACATCTGGCGGATATCGTACAGGAGCTGAATGTGATGTTACAAGAACAAACGACGAGGGCTGAGGACAAGGTTTCA
CTTATCGAGTTTCTGCGCGAAACGGCCGAGGAACAGCTGACAGAGTATTTATCCAATTTGAAAGGTTTAGAGCTAAGGGA
ACGCCCTGCTCTGCTCCTGGCTTTGAGGAATAGTCTCGCCTTGGTCGAGCTGTGCCCCAATTTAAAGTTGTGCTTCTGCC
AGCCGTCCAGTTGGCGGCAGTGGACTGACAACTCGGCGGGATTGGGAATTGAGCATTGGCAGCGCATTTGTGGCCTGATC
GAAAAGGAGATGCTATCCTTTTGGCTGGTCATCGTTGACGATGTGTTGGCCGGCCACAATTGCGAAGAGAAACTGCCAAA
GGTCATTAATCATGAAGTGGTTCTCAGCGACTTTGCGCTTTGGCAGACCTTGACACTGGAACAGCGCGACGAGGACCAGG
AGCAGAGTGTTCAGTCAACCATTCGAATCCCCAGTCAGCCGCGACTCTCTCTGCAGACGTATCTTCATCAGCTAATTCAG
GCATTGAATTCGGTTGTTCCCCAAACTCTGCCACCCAAGGTATTGCAAGCATTCATTCAGCGGCTCATAGGGAAACTGCT
CTGCCACTACGAGGGATTGGCCCACGCGGAATGCACCAAAGCCAGTCAGAATATTGCCCTGCAACTATACTTTGATCTTA
AGTTCCTGGAGCGCGTGTTCGCCATTTCACGTGAGGAGAGGACTCTCTACGACCAAATCCACGCCCAGCAGAACCAACTG
CGCGACTACATAGATCCCTTTGACTTCGAGCTGTTTGCCGAGCATATAACCGCTCATGTGTCCCGAGCTGCAAGCCGTCT
GCAGGGTGAACTGGGAGTGCTTACTCCCTCGGCAGCTGCTCCCAGTCAGGGTGCAGCTGCTGCCAGTTCTTTGGCCCATG
AAGCAGATCCCAATGTGCTGTGTCTCAGTTCTTCCGGATCCACGTCGCTGTGGTTCCCGCTGCTGCCCATTGTGATGCCC
CAAGCTGCCGGAAGAGTTACTAGCGCAGAGCGGAAATCTCCGATCCAAGAGCCAGTTGAGAAAGATTTCTATCGACTGCA
TTCCTAAGTCAATAGTTTCAACATTTGCTCTGGTTGGACGGCGACAACGACGCCGACGAGGAAGTCGGGTGGCAATGGAG
CCCGCAAGGGAGACAGCAGCAAATCCAAATCGAGCGCAGCTTCCTTCTTTGGGATGTCCCAGGAGTGGTTTCGCTAGAGG
ATTCAAATCAAGTGGCCTGTGAAGTGCATTCGAGCGGAATGCGGATGGGATGCTCTTCTATTGTTAAGCTTAACCTACAT
AAATATATCCGAACGTACTTGTAGTAGAAGAGGCGGGCAGCGCCCAGTAAATTGTAAGAAAGTCACATACATTATAGAGA
TACTCGTATATAC

Other Products of this Gene

Other Transcripts

Name

FlyBase ID

Length (nt)

Cog1-RA

FBtr0082624

2919

Cog1-RC

FBtr0334597

4785

Polypeptides

Derived from THIS transcript

Name

FlyBase ID

Length (aa)

Cog1-PB

FBpp0306663

854

Derived from OTHER transcripts

Name

FlyBase ID

Length (aa)

Cog1-PA

FBpp0082093

886

Cog1-PC

FBpp0306664

886

Comments

Transcript terminates at site supported by polyadenylated cDNA.

External Crossreferences and Linkouts ( 1 )

Crossreferences

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

NM_001275567

Synonyms and Secondary IDs (2)

Reported As

Symbol Synonym

CG4848-RB

Cog1-RB

Secondary FlyBase IDs

References (0)

Report Sections

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