Transcript Dmel\pHCl-RD

General Information
Symbol	Dmel\pHCl-RD	Species	D. melanogaster
Annotation Symbol	CG44099-RD	FlyBase ID	FBtr0334973
Feature type	mRNA	Associated gene	Dmel\pHCl

Evidence Rank	Weakly Supported	Length (nt)	3164
Evidence Score	3

Map ( GBrowse )
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 10 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	AM02141 EK222061 IP07360 IP07460 IP07560 RP004231386 RP004440048
End(s) extend beyond the annotated transcript, internally consistent	71625 99374 EK199730
Sequence
	AGTTCGGGTCGGGTTTGCAATTCAACAGCACTGCGGAAGCGGAGAAAACT CGTCACCAAAGCGGACGGGCCAAACAATAAGCCAGCGCCACAGCCAGCGG CAAGTGCACATAAGTTGCAACAAGCAAAGTAACAACTACAGCAACAGCAA AAACAACGTAACAAAATAGGTAAAACAGTATAAACAACGCAACATTGTAA GCTGGCTGAAAGGCGTTGCCAGATTGTTGGCCAACAGCAATAGCAACAAC CGCACTAGCAACAGCTACAGCAGTACTACAACAACAACAACAACCATAAC AATTGCCCAAAGGGCCAAATGAACGTTGTCGGCTAGTCCGTCTGTCGCCC GCTTGGTGGCGCTAGCTAACTGACTGAGCAACAACAACAACACTGCGTGC TGCCGCTGGAAATCCTGTCGCTAATTAGCGAACTGGCGACGTGTGCGCTT ATGCAGACACAAGGCGATAGCGGATTCCATTGAACTGGCTGCCGGTTTAA ATTTGTTTTCGTAACATGGGCTGCGTCTTTGAAGCGGCCAAAGAGCAGCC CCACAAACCGAGAAGCAGGCAACTGAGGCGCAACCAATGCCGTGGAAAAG CGGAAAAAGCAGCAGCGGGGACCAGAGGCAAGGTCGCTGTCAGAGGAAAC AACGACAAGCCAGCTGAGGACATCAAAATCAAGGATAACTATCAACAAAA CCATAAAACGCAAACCGAAACACAAACAGAAGTAGCAGCAGTAGTAGCAA TAGCAACAGACGCAGGAGCAGAAACAGAAACTGAAACAGAGGCTGAGGCC CAAAAAGAGCCAGCAACCGGGCCCGAACATCTGAAGGCGGCGGCTCAAGT GCTTTTAACGATACGGCAGGCACGTCAGGAGAACAACAAGCACAGTAGTA GTCAAGTGGCTGAAACGCACAAGGACGAAGGCGAGGACGCGTTGGCGCGG CAAGGATCCATTGTCGATACGGCGGCGGGCAGAATCGGAATCGATATTGC GGCAACAACGATTCAAGTCGCCGAGCGGCATGAGGATGGGCAGCATTGGC AGCAACACAATGTCCGCCGGCGGAGGCGCCAGCCAGATCCTGCAGCGCAT CCTGCAAGCATCACCAAACTTTCGGCAATATCCCTGCATTTTCACGCCCT CGCCGCCCTAGCGAAAACGCTCCAAAAGCACGAGGACCTGAGTCCTGTCC AGGATCGCCAGCCCCTAGCGTACCGGGCGTGGCAAGAACATCCGTATGCC GAGACCCAAATGCCCGCCACCATGTCAGCGGCCATCATTGCGAATGTCGG CGCTACTGCAGCGGCCACCTCGGCAGCCGCCTTCCAGTATCTCGGCCAGC ACTACAAGCACTACAGCCAGTCGATCAGCTTCTACGCCGCCTCCAGTGTG CTCCTGATGCTTTGTTATCTGACCACCGCGTCCACGGCAGCTGCCACGCA GTCGGAGACGGGTGCCCTCGACAAGCATCCCATTCATGGCATCGATTGGT CGAAATTTGATGAGTCCAGTTCGGATAAGGAAATATTAGATTTACTGCTT GAGAAGAAGCGCTACGATAAACGATTACTGCCGCCTGTAAATGGCACTCT GACGGTGAACGTGAACGTGCTGCTCCTGAGCTTAGCATCGCCCGACGAAA GCAGTTTGAAATACGAGGTTGAATTTCTGCTGAACCAGCAATGGAACGAT CCGCGACTGCAATATGGCAATAAGTCTCATTATGACTTCTTAAATGCTCT GCATCATCATGATAGCATCTGGACGCCGGATACGTATTTCATTATGCATG GCGATTTCAAGGATCCCATCATACCAATGCATTTCGCTTTAAGAATATTT CGGAACGGGACCATTACGTACGCAATGAGACGTCACCTGATCTTATCCTG CCAGGGAAGTCTTCATATATTTCCATTCGATGACCCCAAGTGTTCCTTCT CCATGGAGAGCATTTCCTACGAGGAGGCCCAAATCAAGTACGTCTGGAAA AACGATGAGGACACTCTGCGGAAGAGTCCTTCGCTGACCACATTGAACGC GTACTTAATCAAGAATCAAACGACGGCCTGCGATCAGAACAGCTGGAGAG GTAATTACAGTTGCCTACAGGTCGAGTTGACATTTACCCGTGATCGTGCG TATTATTTTACAACCGTTTTCATACCTGGCATTATATTGGTCACCTCGTC GTTTATCACATTTTGGCTGGAATGGAATGCAGTCCCAGCCCGGGTTATGA TCGGCGTGACAACAATGCTGAATTTCTTCACTACCTCGAACGGTTTCCGG AGCACTCTGCCGGTTGTTTCTAATCTGACGGCGATGAACGTGTGGGACGG CGTGTGTATGTGCTTCATCTACGCCTCCTTGCTGGAATTCGTCTGCGTCA ATTATGTGGGGCGAAAGCGACCCCTGCACAACGTCGTCTATCGGCCCGGC GAGAATCCCGTAACACAGCCCGGCGAAAAGCGTCAAAACGCCGGGGCACC GAACGAAATTGTGGCATGCACCACCTGCGGCGGCAGCAACAGTCCGTGCA CCCATTCGGCAAATAATGGATGTGCCACGGAGACCTGCTTCGTTCAAGTG CGGAAAAAGGAGCCACCTCATCCGATTCGAGTGGCCAAGACGATCGATGT CATCGCTAGAATTACATTTCCAACTGCTTATGCCATTTTTCTGATATTCT TCTTTGTACACTATAAAGGATTTTCGTAAAATTAAGCAAAAAAAACACTA CAAGTAAAGCATAAACATACATACATATATAGATACTTGAACACGCTAAA TTGCCGAAGCAAAGCCAGCAAATTCGTAATGTAATTCGTAGAGAAACATG CAGACCGACATGAGAACTCGTTTGCTAAATTCTAGGGCCTTGCAAAGTCA TCTAATTTTAATGGAACAAAGGGAAACACAAAGTACATCTAATTATTCAT TAATGATTATTTAAATGGCAACAACATGACAAAACCAGTGATAAAAACGT CAAAATGAAAACATTAGTTTAAACTGAGTTGTTAATGGGGAAAAAAGAAA AATGAATAAGTTGTTAATAATTAATATTTACGAAAGTTAAATTTATGCAA ATGAGCAAACATACGAATGAAACATTTTCGACTGCCTTTTTTAAAAATAG TAGACAAACAAACC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) pHCl-RC FBtr0334972 3361 pHCl-RE FBtr0334974 3239 pHCl-RF FBtr0334975 3293 pHCl-RG FBtr0334976 3687 pHCl-RH FBtr0334971 3247 pHCl-RI FBtr0334970 3223 pHCl-RJ FBtr0334977 3277 pHCl-RK FBtr0334978 3199 pHCl-RL FBtr0334979 5941 pHCl-RM FBtr0334980 3818 pHCl-RN FBtr0334981 6629 pHCl-RO FBtr0334982 3743 pHCl-RP FBtr0334983 3218
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) pHCl-PD FBpp0306986 737
Derived from OTHER transcripts	Name FlyBase ID Length (aa) pHCl-PC FBpp0306985 637 pHCl-PE FBpp0306987 762 pHCl-PF FBpp0306988 779 pHCl-PG FBpp0306989 681 pHCl-PH FBpp0306984 762 pHCl-PI FBpp0306983 754 pHCl-PJ FBpp0306990 772 pHCl-PK FBpp0306991 746 pHCl-PL FBpp0306992 747 pHCl-PM FBpp0306993 954 pHCl-PN FBpp0306994 978 pHCl-PO FBpp0306995 929 pHCl-PP FBpp0306996 754
Comments
	Corresponds to pHCl-C mRNA in FBrf0187801. Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001038934
Synonyms
	CG44099-RD pHCl-RD
References ( 0 )
	No references are recorded in FlyBase at present.