Transcript Dmel\how-RF

General Information
Symbol	Dmel\how-RF	Species	D. melanogaster
Annotation Symbol	CG10293-RF	FlyBase ID	FBtr0335195
Feature type	mRNA	Associated gene	Dmel\how

Evidence Rank	Moderately Supported	Length (nt)	4003
Evidence Score	7

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 247 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	7268 7877 10968 13543 13797 17265 17518 34005 37667 38051 41565 41779 41933 45925 50811 52727 53874 60424 60447 63863 67491 70438 78664 79315 83133 99710 104490 106729 121385 121813 157407 161895 162950 173197 190047 191380 CK01.2D.A4 CK01.6C.B8 CK01.14C.G2 CK01.51C.F6 CK01.76A.H4 CK01.76D.F11 CK01.78A.C2 CK01.85B.B4 CK01.87D.H4 CK01.93B.D11 CK01.93B.H11 CK01.101D.A8 CK01.103C.F5 CK01.112A.B2 CK01.113A.F3 Dmel_neb_015474_0374_2972 EC216014 EC253433 EC256447 EC257740 EK001237 EK002417 EK009828 EK014943 EK040855 EK059462 EK060841 EK067538 EK069362 EK073511 EK073523 EK079323 EK085836 EK086923 EK106215 EK115516 EK115614 EK126145 EK129749 EK148725 EK150854 EK154743 EK154954 EK155511 EK155954 EK164457 EK166557 EK168642 EK169164 EK175907 EK177149 EK178025 EK185212 EK186532 EK189510 EK208123 EK208963 EK209105 EK216958 EK222363 EK232663 EK241210 EK246605 EK260254 EK267248 EK279739 EK290235 EK292337 EK304907 EP08761 EP11721 EP22136 FGA010F05 LD02785 LD08027 LD08029 LD13412 LD16219 LD16421 LD20232 LD32729 RE01513 RE01923 RE02217 RE04789 RE10258 RE10729 RE11592 RE14796 RE16140 RE17994 RE18969 RE22419 RE22849 RE25590 RE30266 RE31182 RE32602 RE38886 RE44020 RE45850 RE46096 RE46158 RE49118 RE53496 RE53608 RE53632 RE54020 RE56035 RE56542 RE58485 RE62511 RE63990 RE65764 RE68461 RE71470 RE74703 RE75011 RP004001587 RP004029439 RP004039551 RP004040006 RP004058923 RP004061955 RP004067016 RP004071559 RP004075854 RP004086416 RP004088928 RP004089766 RP004090384 RP004091524 RP004132296 RP004143476 RP004150072 RP004169785 RP004172493 RP004191920 RP004193982 RP004197147 RP004199142 RP004199411 RP004210282 RP004210531 RP004213835 RP004216775 RP004217836 RP004219907 RP004222725 RP004224017 RP004224641 RP004227206 RP004228045 RP004230003 RP004230569 RP004234916 RP004235229 RP004236669 RP004237852 RP004237985 RP004239018 RP004239861 RP004241363 RP004245678 RP004247978 RP004252119 RP004253503 RP004254963 RP004258544 RP004259106 RP004264939 RP004268989 RP004305986 RP004377393 RP004384001 RP004386846 RP004390201 RP004405661 RP004406184 RP004409327 RP004414902 RP004453954 RP004455498 RP004465410 RP004468628 RP004469608 RP004483850 RP004485647 RP004486670 RP004488738 RP004490077 RP004492762 RP004500475 RP004512179 RP004519117 RP004520865 RP004521275 RP004523083 RP004528948 RP004532421 RP004535368 RP004537869 RP004546933 RP004549771 SD02290 SD27109 UUGC0761 UUGC0985
End(s) extend beyond the annotated transcript, internally consistent	CK01.81B.H8 EK062864 FGH125A11
Sequence
	CATTCAGTTTCTTTTTCTCTTTCTTTGCGCACGGTTCAGTGGTAGGAAAA TTAGGAGGAATCGTTCAGTAAAGTCCCGAGATCCGTTCGCTATTCCCCGA CTCGAATAAAATCCATATACACATATATCAAATAAACAAAGGATAGGAGT CCTCAGAGAAGAAAATAACGTGTTAAAAGTAGCAAAAACAAATAAAAAAG AAGTGTGCACCAAGTAAAGAAAGCAGAGACCCAAGGAAAGTTGAAAGTTG AAAACCAGAATCTCGTCGAGAACAAAACAAAAAGTTCCCAAAAACCCACA CATCACACACGCACGCAACAAAATGAGTGTCTGTGAGAGCAAAGCCGTTG TGCAACAGCAACTGCAGCAGCACTTGCAGCAACAGGCAGCCGCAGCAGTT GTTGCGGTCGCGCAACAGCAGCAGGCTCAAGCCCAAGCCCAGGCTCAGGC TCAGGCACAGCAGCAGCAACAGGCGCCGCAGGTGGTGGTCCCCATGACCC CGCAGCACTTGACCCCACAGCAGCAGCAGCAGAGCACACAGAGCATCGCC GACTATCTGGCCCAGTTGCTCAAGGACCGCAAGCAACTGGCCGCCTTCCC CAACGTCTTCACCCACGTCGAACGCCTGCTGGACGAAGAAATTGCACGCG TGCGCGCCTCACTGTTCCAGATCAATGGGGTCAAGAAGGAGCCGCTCACT CTGCCCGAACCCGAGGGCTCTGTGGTGACGATGAACGAGAAGGTTTATGT GCCAGTCCGCGAGCATCCAGATTTCAACTTTGTCGGTCGCATTTTGGGAC CCCGTGGCATGACCGCCAAGCAATTGGAACAGGAGACCGGCTGCAAGATT ATGGTCCGAGGCAAGGGTTCCATGCGCGACAAGAAGAAGGAGGACGCCAA CCGTGGCAAGCCTAACTGGGAGCATCTGTCCGATGACCTGCATGTCCTGA TAACCGTCGAGGACACCGAGAACCGTGCCACAGTGAAGTTGGCCCAGGCC GTCGCCGAAGTACAGAAGTTGCTCGTGCCGCAAGCCGAAGGCGAAGATGA GCTAAAGAAACGTCAACTCATGGAATTGGCGATTATTAATGGCACTTATA GGGACACAACAGCGAAATCTGTCGCAGCTTTCTCATGCGTTGGCTCTGCT TCTTATCTGTATCCCGCAGTGTGCGATGAGGAGTGGCGCCGCCTGGTTGC CGCCTCTGATAGCCGCCTGCTGACATCCACCGGCCTGCCCGGCCTTGCCG CCCAGATCCGTGCACCCGCCGCCGCCCCGCTTGGCGCCCCATTGATCCTG AATCCCCGGATGACCGTCCCCACAACGGCGGCCAGCATATTGTCCGCCCA GGCCGCTCCGACAGCCGCCTTCGACCAGACCGGCCATGGAATGATCTTCG CACCGTACGATTATGCGAACTACGCCGCCCTAGCCGGCAATCCTCTGCTC ACGGAATATGCTGATCATAGCGGCGCCATTAAGCAGCAGCGTCGTTTGGC GACTAACCGCGAGCATCCCTATCAGCGAGCAACGGTCGGAGTGCCAGCCA AGCCGGCGGGTTTCATTGAGATACAGTAAATACCATGCATAGTGAATCGA GAAATTCGAAGCACTATAACTCAGAAAGTAACACTCTAAAATCACACCAT ATCGGCGAAAGCAACTTTATAACTTTAAATCAATAATGTACGAAAGAAGA AAAGAAACCATTAAGAACAACGGATAACGAACGATTGCGTTTGCCTGCCC TTTGATTGCGTACGCCAGGCAGCCGATCACTTTAGTTCAATTATTTTAAA ATTTTGCTATTTATTTTGATACAAATGCTGCTCATAACTGACCATCCCCA ATTCCAATCCACACTGTATGTTCGATGAAACCTGACCGGAATCGTTGGCC TGGCCTGGCCGCTCTGCCCTGATCAGGGTTCTGAAAAAGAATTTTCAAGC GCACCGCCTCCACAGGAAACTAAACAAATGTCCCAAACACACTACCAATC CGCTCCCACATCCGCCATGAACCATGAATCCATCGCCTGCCGTAGATGAG CACGGAATCAGAGCAGCAGCAGCATCCCAGCCAGGCCGAAAGCAGAGCCA CGTGTGTGTTGTGAATGTGCTTACTTGAAGCTAACAAAAAAGCGTAACCA AAAGTCAGATATCCTGAGCCACCACATGTCACTTACACAACTACTAAAAC ACTGAACCCCTCCGAACGCCAAACTCCAAACTCTGAACCTATTTGCCAAA TGAGCAGCAGATGCGGCACATTCAACACCAGCAGCATCACAACATCAACA GCAAAAGCAAAAGCAAAAGCAACAGCAACAGCAAACGAACAGCAGCAACA TCAGTATGTATTGAATCTTGTGGCCATTAAACTGTTACGTTTTGCCAGCA AACAAAACAAGGCAATTAAGCAAACGATTGATAAGAGAATCAAACATAGA GCTTAGTTTAATTATGATAATCTAAAGGAAAATACAAGTTAGTTCTTAGT GTAAAAGTTCAACGAACAAAAACATACTTAATGCAAGCATATACATATAT ATATATATTTAAATATATATACATCCAAATGCATATACAAGTCTGTATAT AATAACCCCAAAAGCCCCTAAGCACAAAAAATAAGGAAAATCATGTTAAC GGAATCTCATCCAAGAAACTCTACTCAACCAACCAAAACTGTTTTAATTT TTTTAAAAATCTGCACTTTTAACTCAAATTGCAAAGATGAATCTTTACAC TTTTCATTGGATTGTGCACGAAGTCTATTTAAATCCATATTGTGTCGGAT ATAGACTATCACCCTTCGATTAAGCATAATCTATTTTTGTTAAACTGACG CTAATTCTTGTTAATGAAGTATTTTTTGATTATGTTATTGCATATCTATA TTTTATGTATAGATTTCGTACCCCACTTCAAATCGATCGTGTGATGAGTA AGTGGGGGCGAAACAGAAACAACATATTAAAACACATTTAACAGCCATAT TTAGTTAATGAAACAAACATATATTATGATAATAGCAGCAAGCATTCATA ATGTACAACTAAACGCTAAACTTAAATTATTTGTAATATTTTAAAGCTAA TGTATTATATGCAGAAATAAAACACAAACTTACTTTTTTTAAACGAATCA TTGTCCTTTGAATGCGATTGCCACAACAAAATTGAATTCTTTAATTTAAA ATAAATATCACGCCGCCAGTAATGGCAAAAATGTATCTATTTTATAATAG TGAATGAAATAAACAAAATGCAGAAAAATTAGCACGGAACAAAACTAGAA AGCGAAAGTAAATTGCATTTAATTTATGGTACAAAGCAATCAACGCAAAG TTGTTGCAAACTTTATTTTAAATTAAAGAATTTGCATTAAATTTTGTTGA CAAAAAAGAAATCTTATCAATATGTGCCTTAAACAAATTGTATAATTGGC ACCAATCAAAATGAAAATTAAATATAAAACAAAATGAAAAGTATACAGAA ACTCTGTTGAAATTATTCTGCGAAATGTGAGACTTATACTCAGAAACAAA ACGATGTTCAACCACATGGGAGTTGACTAATCTTTTAATGTTAATAAACA TAATCATAATGTATAACTTTTATTGATAATGACGGCAATCGTGCAATCGT AGCAAACTTTGCTTATGATGAGTTCAGAATTAATTTTATCACGATGAAAA TGTAATCCTTTCGATAATTGAATAACAGAAAGTAAACGATTCGTCTCGTT TTATTCACATTACATTAATCGTATGCTGTGCCCCTAACATCGCATAATAA ACATCATTCATTCATTGCCAGCATTGTATAATTTTAACTTCATAATTTGA GAAAGAAATCATTGATTTTTTGTGAGATAATCCATATGTTCAAAACCTAA TAATATAAATCTAAAGCAAACGCACATGTAATTAAATGCATATGTACGAG CGTGTGCACATATGTACGATTATGTATAACTTTTTGCATAAATAAATGTT TAT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) how-RA FBtr0084177 3964 how-RB FBtr0084178 1759 how-RC FBtr0100514 2181 how-RD FBtr0301401 3884 how-RE FBtr0301402 3103
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) how-PF FBpp0307182 418
Derived from OTHER transcripts	Name FlyBase ID Length (aa) how-PA FBpp0083575 405 how-PB FBpp0083576 375 how-PC FBpp0099954 380 how-PD FBpp0290615 405 how-PE FBpp0290616 404
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001275893
Synonyms
	how-RF
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2005, Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. [FBrf0182792] FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]