A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\su(wa)-RM

General Information
Symbol Dmel\su(wa)-RM Species D. melanogaster
Annotation Symbol CG3019-RM FlyBase ID FBtr0336687
Feature type mRNA Associated gene Dmel\su(wa)
Evidence Rank Moderately Supported Length (nt) 3357
Evidence Score 7
Map ( GBrowse ) GBrowse View Help detailed view FBtr0070184 FBtr0070172 FBtr0302884 FBtr0336688 FBtr0070183 FBtr0070173 FBtr0070182 FBtr0070174 FBtr0070175 FBtr0336686 FBtr0305652 FBtr0070177 FBtr0070176 FBtr0336687 FBtr0305651 FBtr0070178 FBtr0299571 FBtr0305650
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 22 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence 
CCACCTCTAGCATAATATATGTACTACATTTATACAAATATAAATATAAT
GGAAATATGAGAATTTAACCAAACACCGCCCGAAATATGAGATCCTCCGA
GCACAGATCCTAGCAATCGATCTCCTCATAAAGTGAGTGAGTCGCAAGAG
ACGAAGGGAGCGAGAGAGAGAAAGGAGCACTTAAATTGCACATTCGCTGC
TGTTTGTCCGCCGCGATGCTGCCCTACAATGTGCGAAACGCCGGTGGCGG
AAGCGTTGGCGGAATCCTGCGGCGCACGGGCCAAGGTTCGGGCACCGGAA
GCACGATTCTTGGCAATGGAAACAGTCCGGGAGCACTAGGAGCCGGAAAA
GTGTCCTCCAGCCTGGAAAACCACAGACAACCGCCGTTGGAACTCCTCGT
GTTTGGCTACGCCTGCAAGATTTTCCGCGATGACGAGAAGGCGCGGGAAA
TGGACCACGGCAAGCAGTTGATTCCCTGGATGGGCGATGTAAATCTCAAG
ATTGACAGATACGATGTGCGTGGAGCCCTCTGCGAACTGGCACCGCACGA
GGCGCCACCAGGCGGATACGGTAACCGGCTGGAGTACTTGAGTGCCGAGG
AGCAGCGCGCCGAGCAGCTGTGCGAGGAGGAGCGGTACCTGTTTCTGTAC
AATAACGAGGAGGAGCTGCGACTGCGACAAGTACTGCAAGTGTCATGAAA
CGCAAAACGCAATCAAACCCAAATCGCAAATCGAAAATAACTTGAACAAA
TCAGTACCAATCACATCAAATCCAACCATCGAAAAAGATACCACCGACAT
CCCCTCGATATTTCCAGCGAGTCCGTTCTTGGAGCAGAGGAGGACCTCAA
GCGACTGCAGCAGGAAACCTCGGGCGGCTGCTTCAGCCAGGTGGGCTTTC
AGTACGATGGCCAGTCGGCAGCCTCCACTTCCATCGGTGGCTCCTCAACG
GCGACCTCCCAGCTCTCGCCGAACTCCGAGGAGAGCGAGCTGCCTTTCGT
CCTTCCCTACACCCTGATGATGGCACCACCCTTGGACATGCAGCTGCCCG
AAACGATGAAGCAGCACGCTATCATAGAGAAGACTGCTCGCTTTATCGCA
ACCCAGGGCGCCCAAATGGAAATTCTTATCAAGGCAAAGCAGGCGAACAA
CACGCAGTTCGATTTCCTGACCCAAGGTGGACATCTGCAGCCTTACTACC
GTCACCTTTTGGCTGCTATCAAGGCGGCCAAGTTCCCGCCCGCACCACAA
ACTCCGTTGGATCAGCAGAATACAGACAAGGAAGCACCCTCAGCGGACGA
CCACAGCGAGGAAGTCGCGGGTGGAAGGAGGAACCCCAACCAAGTGGTCA
TCACGGTGCCCACCATCAAGTACAAGCCCTCGGCCAACTGCGCCTACACC
CAGCTAATTAGCAAGATCAAGGGCGTGCCCCTCCAAGCGGTCTTGCAGGA
GGACGAGTCAAGCAATCCGGGCAACTCGCAGCACTCGGGCGGCACGGCCT
CGCCCGCACTTAGCTGTCGATCCGAAGGTCACAACAGCCAGGGAGGTGAG
TTCACACCCGTATTGCTGCAGTACAACGGGAGCACCTTCACACACGAGGA
GGAATCGTCGAACCGGGAGCAGCAGGATGATAACGATGTCAACGGTGGCG
AGCCGCCCCAGGTGGAGCTGCTTAAGAACACGAGTGCGCTGGCGTTGGCC
CAAAACTATAGTTCAGAAAGTGAGGAGGAGGAAGATCAAGTTCAGCCAGA
AAAGGAAGAGGAAAAGAAACCAGAGCCCGTGCTTACCTTCCCCGTTCCGA
AGGACAGTCTAAGGCACATAATCGACAAGACGGCCACGTACGTAATCAAG
AACGGACGCCAATTCGAGGAGACCCTTCGCACGAAGAGCGTGGATCGGTT
TAGTTTCTTGCTGCCGGCCAATGAGTACTATCCATACTACTTGTACAAAG
TGACCGGCGATGTGGATGCGGCTTCCAAGGAGGAGAAAACTAGGAAAGCA
GCAGCCGTAGCTGCCGCCCTGATGTCAAAGAAGGGTCTTAGTTTTGGAGG
AGCAGCAGCTGCAGTGAGTGGAAGCAATCTGGATAAGGCTCCTGTAAGTT
TCTCCATTCGGGCTCGCGATGACCAATGTCCATTGCAACACACTTTACCG
CAGGAGGCCAGCGACGAGGAGACTAGTTCGAATGCTGCTGGGGTGGAGCA
TGTGCGACCAGGTATGCCAGATAGTGTGCAACGGGCCATCAAACAGGTTG
AGACGCAGTTGTTGGCCAGGACCGCCGGGCAGAAGGGAAACATCACGGCT
TCCCCATCCTGTTCCTCACCACAAAAAGAGCAGCGGCAAGCTGAGGAGCG
TGTTAAGGATAAGCTGGCGCAGATTGCCCGCGAGAAGCTGAACGGAATGA
TTTCACGCGAAAAACAATTGCAGTTGGAACGAAAGCGAAAGGCCTTGGCC
TTTCTAAATCAGATAAAAGGTGAGGGTGCCATTGTGGGCTCTGCTGTGCC
TGTTGTTGGTCCGAATCCTCCAGAGTCAGCGGCCGGAGCTGCGACCGCCG
ACAGTGGTGACGAGTCTGGTGATTCTGTACGTTCCATACCAATTACCTAC
TTTGGCCCCGACGACGATGACGAAGTCGGTGAACAGAGGCCTGAGATGAG
GCTCATAGGGAGCACGCAGAAGGACGAGGAGGACGACGATGAAGAGGATG
GCGGCGATCTGGAGAAGTACAACTTGCTCAACGACGATAGCACGAACACC
TTCACCAGCAAACCCGTGCTTCCTCCCACCGCTGCTCCACCTCCTGCTGC
TGTTCTGCTTTCTGACGACGACGACGTCCAGCTTGTGGCCACTACCTCAA
CGCGGTCCTCCAGCTCGCGCCATCTCAAAACCCACCGCCGGAGCAGAAGT
CGCAGTAAGAATGTCCGAAGCAGTGACAGCAGCCCTTCTAGTCGAGAGTC
CTCGCGCCGACGCCGCCAGAAGAGCAGCAGGCTTTCCAGGGAGCCATCAT
CGAACCCGCCACGTAAGTCCCAGCATTCGTCAACGCAGCGAAAAAAGACC
CCCAAAAAGAGGAGGCGCAGCAAAAGTAGAAGTCGCTCTAAAAGCATCCG
GCGGAGTAGGAGCATAAGCATATTGAGAAACAACCGGCGGAGCAGATCGC
GTAGCCCCAGCTGTCGAAATGCAGAACAGCGACGCCAGCAGGACCGACGG
CGCACTCCCACTAAAAAGTCCCACAAGCGGCACAAGCGACGCAGGCGCAG
CAGCTCCCCCTGAGAATCTTCCTAGAGCTCCGCAACCACCTCCACATTTC
AAAGTTTTTTTGTAGGTTACAAGTTGTATCAAATAAACCCCCAACATATT
TTTGTAA
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
su(wa)-RA
FBtr0070176
3201
su(wa)-RB
FBtr0070177
4058
su(wa)-RC
FBtr0070178
4838
su(wa)-RG
FBtr0302884
4290
su(wa)-RI
FBtr0305651
3480
su(wa)-RJ
FBtr0305652
3611
su(wa)-RK
FBtr0336686
3201
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
su(wa)-PM
FBpp0307668
160
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
su(wa)-PA
FBpp0070171
963
su(wa)-PB
FBpp0089322
176
su(wa)-PC
FBpp0089323
176
su(wa)-PG
FBpp0292012
748
su(wa)-PI
FBpp0296931
217
su(wa)-PJ
FBpp0296932
186
su(wa)-PK
FBpp0307667
963
 
hide Comments
  • Non-coding alternative transcripts supported for this gene; retained intron (FBrf0076530, FBrf0046125).
  • Unconventional splice site postulated (AT-AC); based on EST and RNA-Seq data.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
•
hide Synonyms
su(wa)-RM
 
hide References ( 1 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]