A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\CG12582-RF

General Information
Symbol Dmel\CG12582-RF Species D. melanogaster
Annotation Symbol CG12582-RF FlyBase ID FBtr0336702
Feature type mRNA Associated gene Dmel\CG12582
Evidence Rank Strongly Supported Length (nt) 3100
Evidence Score 15
Map ( GBrowse ) GBrowse View Help detailed view FBtr0308946 FBtr0308945 FBtr0306022 FBtr0078964 FBtr0336704 FBtr0336703 FBtr0336702 FBtr0111206 FBtr0078988
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 22 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence
CAGTGGAAGAACTCCACGTTTTGCTGAACGCTCAGAGTGCTTTTTGTCGA
ACAGAGGAGTCGTCTTTAAAGTAGCTCCTCTGAATTGAAACGACCACTTC
TTTCCAGATGAAGTACGGATGCGGATTACTCAGGAATGGCACCACGGGCG
CTGTTATGGTCGGATTAGTTTGTGGCCTTTATGTTTGCAGCGGCCAATGT
GATAAGGTGGAAGTAATAGAGCTGAGCAATTGGACGATAACTAATCAGAA
TGGCTGTGAGTACCATAAATTCAGAGCTGCACAAAAGCCCTTTGCAAAAT
AATCTAAAACGATATTTCAAGTTGAAAAAGTTGAAAAGGGAAGTCCATCA
ACTAAATGTGCCCTGGAGGAGCGCGTTTTCCCATTGGCAACTGTCTTGCT
ACTTAATATAAGTGTTCCTTTCCCCACAGCCCTGACTATTGCCAACCAAA
CGTTGCCCTTGGGCATATACAGTGCCTTCGCACCCCAAGTGCTGGACTCC
TACAACGACGTCGGTCTGCGTTACTTGGCCTACGACAACTTTACCTTCTC
CAATTTCTTTCAGTTCGACGTTCATCACTTCAATCGCGGCCACATCAACC
TGACGTTTCACGGCATTGACACGGTGTCGGAAATCCGGCTGAACCATCAA
CTGCTGGGACGCACGGACAACATGTTTGTCCGCTACTCTTACGAAGTGAG
TTCCCTGCTCCAAGCGGAAAACTTTCTGGAAGTTGAGATCCAATCTCCAG
TTGTGGCTGCTTTGGCAAGAGCCAATGCTTTAAAAGAAGCTAAAAAGAGC
GTGCCTCCCGAATGCCCCAACGAGCGCTACCATGGTGAGTGCCACATGAA
CATGCTGCGGAAGATGCAGGCTAGCTTTTCCTGGGACTGGGGTCCTGCAG
CTCCCTCTGCTGGAATCTGGAAAAACGTGGAGCTGGAAATCTACGAGGTG
GCGGTTATTCGTGAGGTGGATGTGGACGTTAGCCGCGTCAATGGTTCGTA
CTGGAACATGCATATTCGCTGCTTCCTGGACGCGGGAGGCTGGCAAAACT
TCAATGGAAGACTCGTCCTATATGCTGTCGAGCTATTGGACCGTCCGGTA
GTAGTAGACAGATACGCAATAAAAAACATCAGTCACTTGGCGCCAGTAAT
TGAATTCGATCAGGCCGTGCCAAATGGGAAAGTCGTAACCTGGTGGCCCA
ATGGCTACGGCGAGCAGAAACTGTATCCGCTCCACTTCACTCTGAAGACC
TGGCTGGGACCTGATGGACCCGAGGTTCGCTCTAAGACCAAGTCGCACAA
GTCGCTCCGAGTGGGTTTTCGTACGCTTGATCTAGTAGAGGATCCCGCCC
CTGACGGCGTTGGAAACACCTTCCTGTTTCGAGTTAATGGTGTAGAAATG
TTTATGAAAGGCAGTAACTACATACCATCCCACTTATTACCCGAAATGCA
AACAAATGAACAGATTTCACATTTATTAAGGTCCGCCAAGGAAGCCCATA
TGAACATGCTTCGAGTCTGGGGAGGCGGAGTTTACGAATCGGACTACTTT
TACCAGCTCGCCGACAGCTTGGGTCTTCTAATTTGGCAAGATATGATGTT
TGCTTGTGCCATGTACCCGGTTAACGACGAATTCCTATCGTCAGTGCGTG
AGGAGGTTCGCCAGAATGCCATGCGACTATCACACCATCCAAGCGTAGCC
ATTTTTGTGACCAATAACGAAAACGAAGCTGCTTTGGTACAGAACTGGTA
CGGCACGCTTTTCGAAAGAGATCGATTTGAGAGCGAGTACCGGGAGCTCT
ACCTTGCTAATGTCATCCACGAGTTGAAGCTTGTTTCGCATAGCTCTCGA
CCTCAGCCACTGGTCTCCTCACCTTCAAATGGCAAAGCTAGTGAACCGGA
CAACTATATTTCGAGCAACCCTCAGGATAACCAAAATGGCGATGTACATT
TCTACGACTACACTAAGGACGGCTGGGATCCAGGAATTTTCCCACGTCCT
CGATTCGTCAGTGAGTTCGGCTTTCAGAGCTTTCCAGGCGCATACGCATG
GCAGCGCAGCAAGGGCGAGGACGATGACCTCCTCGGCCTGATCACACACC
GACAACACCACCCACTGGGAAATGTTCCTGTTATCGCACTAGTGGAGAGA
CACCTACCGCTGCCCTTTCCAGAGAATGAGAACTACGCGACAGCACTGAT
TTACTTCAGCCAGATTGCTCAAGCCATGGCCACAAAGGTGGAAACCGAAT
TATACCGTAGCCTTCGGGACACTCCCCACAGAACGATGGGGGCCCTTTAC
TGGCAGCTGAATGATGTATGGGTGGCGCCATCCTGGTCCAGCATTGATTT
CTACGGCAACTGGAAGCTGCTCCATTACTGGGCACGTGATTTTCTAGCGC
CTATTTCAATCGTTGCTCTTTACGAAAAGTCCACGGATTCGTTAAACATC
TCCCTTATTTGTGACCAATTGGAGGTGGACCCAAGGGAACTGAATGTCGT
AGCTAACGTTCACCTGTGGTCCCAGCTTCTGCCTCGGCAGTCCACCTCCT
GGGATGTTACCCTGCGCCCCAATGGCGTGCAGTACGACAAGGTCATTGCC
ATCTCCGATCTGCTGCAAGGAGAGTTCACCAGAACTAACGCGTTTTTGGA
GCTGCAGTTGCGCCGCGGGCAGGATGTGATCTCTAGGACCCACTTCTTTC
CCAGTAGCATTGCCGGAGCAGTCGGAATAGAGGACCCCGGGCTTGAGTTC
GAGATTGCCTCCCGTACCTGTCTTAACACCACAAACGTCGTCCGCAACAG
CGTCAGCATTAGCATACAGGTGAAGCGCCCCGCCGTATTTGTATACCTAG
AGCTGCTCAAGCCATACCGCTACACCCTGTCCGAGAACGGATTTATGCAG
ACTGAGCCAATGCATGTCGTCTACCTAACGTTCGACGCACCCTTGTGCGC
CCGCCTTTTGCGCAAGTCGGACCTCCGTGTGCTGACCGTCAACGACTTTA
TGAGATAGTACGGAACGTCTTCATTGACAACTTTAAATCAACGTTTTATA
AATAGCTTAACAATATACAATTCAATAAATAGCAATTAGTGTTGAGCACC
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0078964
3035
FBtr0306022
2922
FBtr0336703
3073
FBtr0336704
3029
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0307683
778
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0078603
908
FBpp0297164
908
FBpp0307684
778
FBpp0307685
906
 
hide Comments
  • Based on cDNA(s) with retained intron; results in premature stop codon and/or downstream start; may or may not produce functional polypeptide.
  • Transcript terminates at site supported by polyadenylated cDNA.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
hide Synonyms
CG12582-RF
 
hide References ( 1 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]