Transcript Dmel\aux-RC

General Information
Symbol	Dmel\aux-RC	Species	D. melanogaster
Annotation Symbol	CG1107-RC	FlyBase ID	FBtr0336705
Feature type	mRNA	Associated gene	Dmel\aux

Evidence Rank	Strongly Supported	Length (nt)	4276
Evidence Score	15

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 53 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	yak-em_CG1107
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	10092 10910 43856 78093 82802 99877 121646 164501 190465 AT13982 AT14567 CK01.18B.A2 CK01.70C.D9 CK01.71C.D5 CK01.114A.A2 Dmel_neb_012693_0673_3352 EC053029 EC053031 EC054488 EK056213 EK056712 EK109861 EK163319 EK211759 EK216060 EK222529 EK268910 EK270009 EK292856 ESG0115a.B21_A10 GH09391 LD09735 LD14932 LD15024 LD15952 LD20493 LD30716 RE19568 RE27456 RE29422 RE29740 RE43258 RE49080 RE57502 RE66952 RE70555 RP001007043 RP001019846 RP001025348 RP001039678 SD14314
End(s) extend beyond the annotated transcript, internally consistent	EK166134
Sequence
	CACCCTGCTGAGGAACCTGCTCCTCCGCAGCCCTGGATTCTTTTTATTTT TTTGTGGCCACGGCGCTACGAAAATGTTTTAGTTCAGTTAACGGGCGCCA GATATTTTAGGTGTATCACTTGTCGATTACAGCCTTCTAGCATTGGCCAC CACCAAAATGGGCGAGTTCTTTAAGTCGCTCAACCTCAACTACTTCTCCT CTAGCGAGGTCAACGGAGCTGCAGGAAACGGAGCACCAGAGGCCCTCGGT GGCAGGCTGGACAATGACTTCGTGGGCCAGGTCGTTGAAGTCGCTGGACA CAGGCTGCGCATCAAGTGTGTCATCGCCGAAGGCGGATACGCCTTCGTGT ATGTAGCCCAAGATGTGCAAACTGGCACAGAATACGCCCTCAAGCGTCTG ATCGGGGCTGACATGCAAGCCTCCACCGCCATCATCAACGAGATCAACAT CCACAAGCAGCTGTCGGGGCACGAGAACATTGTCGCCTTTGTGGGTTCCA GTTATACCGCCCCATCAACTCAATTGGGAGCCCAGTACTTGCTCCTCACC GAGCTGTGTAAAGGCGGATCTCTGGTGGACTGCTTCAGAACAAACAATGC TCCATTCAATCCGACTTGTGTTCTGCGCATCTTCTACCAAATGGCGCGGG CTGTGGCCAGCTTGCACTCACAGTCACCGCCGATAGCCCACCGAGATATA AAGATTGAGAACTTTCTCATTGGCAACGACAAACAGATCAAGCTGTGCGA CTTTGGGTCCGCCAGCACGGAGGTCCTGTCGCCCACGTTTGAGTGGAGCG CCAACCAGCGCAGCATGCTGGAGGACCAGCTAAACACTGTTACTACTCCG ATGTACCGATCCCCTGAGATGCTCGACACTTGGTCCAACAACCCGATTGG GCCCAAAGTGGACATATGGGCTCTCGGATGCATTCTCTACTTCCTGTGCT ACCGCAAGCATCCCTACGAGGATGGCGGAAAGCTGCGGATCATTAACGCC AATTACATGCTTCCGCCAGATCCTCAGTACCAGTGCTTCAGCGATATAAT CCGTGGCTGTTTAAAAGTGAACCCGTTCGAGCGCCTGGATATTACTATGG TGCTGGAGGGCCTTGCAGCCCTCGCTGAGACACACAATTGGTCGCTCAAA GGACCTCTAGACCTTCATATAATGCCCATCGAGTCCCTTCCGGCCGAAAG TCCTCTCAAAAGTTCTGCTTACTCTGAGGTTTACACCGAACCGCTTTCTG CCGCCATACCATCATCTTATAATGGACACGGCAGTCTTCTGTCGTCACTG CGTGGTGGCGCTGGAACGCTTTTAAAGAACATTAAAGATACGTCCACCAA AGTGATGCAAACAATGCAGCAATCTCTTGCTCGCAACGATCTTGATATAA GCCACATTACCTCTCGCATCCTGGTAATGCCCTGCCCCTCTGACGGATTC GAGTCGACGTACAAGACGAACAACATCGAAGACGTCCGACTATCTCTGGA GAGCCGATTTGTCCCACAAAAATTAAGCATTTACAACTTTGGCCAACGAA CAGAGCCACGGCTACCGCCACCCGTGCGAACAGTTGAGGCAGGTTCGGTT TATGGGTGCCCACAGGCACATGCTCCTAATCTGCAGGGCCTTTTTACCGT ATCAGCCGACATGTACAATTTTCTAAATGCGGACCCCAAATCTGTCGTTA TCGTGCAGACTGGAGACTCGGGTGGATGCACTGCTGCCACCGTTATATGC GCGCTTCTTATGTATGCAGATTTGCTGCGGGAGCCGGAGGACGCGGTGCA AGTCTTCGCCGTTAAGCGGCATACCATTAACCTCCGCCCCTCCGAGTTCC GTTACCTGTATTACTTCGGTGACATCCTGCGGCCCACGCCCCTGCTGCCG CACTATAAGAACACAACCCTTGTTTCACTCAGCTGCCAGCCTGTGCCCAG AATGACCAAGGCACGCGACGGCTGTAGGATCTATATGGAGGTTTATTGTA ATGGAAACTTGCTACTCAGCACTCTACAGGACTATGAAAAAATGCGGTTG TATCAGGCCGGCCCCGGCAAAATAGTTCTGCCGATTAACTTGACCGCATG CGGTGATGTGACAGTGGTATTATTTCACGCCCGCAAAGGAATGGTGCGAC CACAAGGCCTCAAGATATGTCAGTTCCAATTCAACACGGGATTCATCCCC GAACCAGAAACGTTGATTACATTCACAAACCAGGACTTGGATGATCTGCC AGACCCTGAGCAGGTGACACCTCGGTTCTGCGTTTCACTTTCTCTGGCTG TTACTGACTCGGAATCACCTCCCAGCCATAAGCCACCATGGATGCCAGCC AAGCCCAAGCGGTCACCCGCCGCTTTGTTCAGCTCAGATTTGGAGTATGC AGAAATGCTCGACAATTTTGGTGCCCGCAAGAGTGATCGCGTCAGCTCTC CGCTCGTTTTGCCCGACGTCACGGAGACCGCCCACGAACTGCCTTCGCCC ATGCCAGAGCCATCTCCGCCCATAGACTTGCTCAATTTAAACCAGCAGCC CAGTGACGTACCAGCAGCAGATCCGTTAACCAGCGCTAAGCCCAGCACAG ATGCCAGCTTTGACTTGCTAGGGGCCTTCGGTGATGATGACTCTACGGGC ATAGGATCTGCGCCAATTCCTGACATACTGCCACCACCGCCACTGCAGCA GCCGCAACCAAAAATAAACAATGACCCATTCGACATATTTGGATCTGTGG ACCAAGGTGGCGTGCCCAGCATGAAGCCATCAGGCTTTCCACCTTTCGTT GGCTCCTTACCAACTTTTGTTGCTCAGCCAGCGGCTACCACCAATCCTTC ACCAACTCATCCGGCAAGGGCATCTGCAGATCCATTTGCGAACATCGCCG ACCTGGCGACAGGGCTCAACTTAAACTTTAACCGCAGCACGCTAAGTGGA AAGTCTCCCGTCAACACTAGTCCGCAGCCTACTCAGTTCTCAAGCCCCAC TCACAAGCCATCGCCATCCTCGCAACCACAAGCAACGTTTATGCATACAC CGCCGACACCGCAGACTCTGCCCTCGACATCGTCTATCAGGACGCCGACG CAGCCACAGGCGGTACCTGCTCAATCAAGACCAGACTACAGTCGACTTCA CTTTGATTCTCAGAAAGCAGCCCAGCAACCGGGCACTGGCGGGTCCAAGA ACTCTGACATATTTGCTGACATTCTGGGCCAACAAGGATACTCCTTTGGC AGCAAAATGAACCAGTGTCCACGATCCATCAATGAAATGCGCAAGGAAGA TTTGTTCAAGGATATGGACCCGAAGAAAGTGCGGATTATGGAATGGACTG ATGGTAAGAAAAACAACATCCGTGCGCTTCTCTGCTCTATGCACACAGTG TTGTGGGACAATGCCAAGTGGCAGCGCTGCGAGATGTCCACCATGGTGAC ACCGACCGAGGTTAAGAAAGCATACCGTCGCGCCTGCCTAGCAGTGCATC CTGATAAGCATAATGGAACAGAGAATGAAGAGATTGCCAAGCTTATATTT ATGGAACTAAACAACGCATGGACAGATTTTGAAAACGATGCCACGCAGCA AAATATGTTTAATGCGTAAAACGCGTCTTATATCTACATATATATATATC ACAGTTAGCCCGTATTTTCGTACTCTTAGCTGAATCTAATGTAAATTCAT GTAAAAGTGTGAGCTTTAATCTTTAAAGTTGAAGTATTGGCATATGTATG CGTATGCAATTTAGATAGCTCAAACAAACTTTAAAAATTATGAACGCCCG AGGACATTCTACTTAATTTGCGTAACAGAAAACCCGAATCCAACATTCCC ATTGCATCCAACAACAGTCCGCCCAAAAATAACGTCGGAAAGTTAAGAAC AAAGCCTTCAGACTTCGGCGACTACCCAATGATTTCACGCCTTATCCATC AAACAATAGAGATCAATTATTCGTGTATATTAATATACACTTTTTCGCTG TAATTAGATTAATTGCGGTATGCCCTTGACCGATTAGTCAATATATGATT ATATGATTAATCTATAAAGTGATGGAAGCAAAAAGTATGGCATTTGTACA TAGCTGTTCCGAATATAAAATGTAAAACTAGTAAAAAACCATTTGCTTTT ACTTTTTAGCTGTGTACATAAATAAGCATATTAGAGGTTATCTAAATTCC GTTTCAGCATTTAATGTTTGCCACTATAAAAATAAATTCTCTATACGTTT CCTTGTGAAATGCCACTGTTAAAGGT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) aux-RA FBtr0078965 4410 aux-RB FBtr0078966 4312 aux-RD FBtr0336706 4288
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) aux-PC FBpp0307686 1153
Derived from OTHER transcripts	Name FlyBase ID Length (aa) aux-PA FBpp0078604 1165 aux-PB FBpp0078605 1165 aux-PD FBpp0307687 1157
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001275314
Synonyms
	aux-RC
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]