Transcript Dmel\SKIP-RJ

General Information
Symbol	Dmel\SKIP-RJ	Species	D. melanogaster
Annotation Symbol	CG31163-RJ	FlyBase ID	FBtr0336712
Feature type	mRNA	Associated gene	Dmel\SKIP

Evidence Rank	Strongly Supported	Length (nt)	6669
Evidence Score	15

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 77 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	LD04190
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	50229 76362 77373 81797 101888 103209 118462 122274 125456 125821 191447 274642 CK01.52D.B8 CK01.60D.A8 CK01.85D.D2 CK01.92C.F12 CK01.96D.E1 CK01.105A.C8 CK01.114A.E10 Dmel_dig_004859_0635_2569 Dmel_dig_010123_0627_3608 EC255941 EC256264 EC257466 EC259299 EK042740 EK067845 EK075117 EK087944 EK176011 EK207301 EK210950 EK215437 EK228657 EK231904 EK247738 EK281508 EK294012 EK302012 EP11116 EP12115 EP18726 EP19217 FGM105B10 LD10564 LD11774 LD14313 LD18290 LD21929 LP20859 RE06801 RE29213 RE38986 RE62560 RP004059406 RP004063690 RP004107448 RP004182261 RP004199240 RP004252035 RP004253193 RP004261429 RP004310707 RP004394613 RP004398557 RP004431542 RP004443186 RP004447203 RP004460258 RP004476752 RP004491766 RP004495579 RP004517591 RP004538633 SD09623
End(s) extend beyond the annotated transcript, internally consistent	RP004205160
Sequence
	GGTCAGTCGTCGAAATGTTCGAGATCCGGTCGTTTTGAAAACCAGCTCGA GCGGTCTATTCGCGTGAAATTGAAACTGAAAAAGCCGGTAAAACTGAAGC AAGTGTGTTGTGATTGAGAATTGAGCGAAACGAAAACGGTGGCCAAACGA GCCGTTTAATAAGCAAACAGGCTGGCCAATAACCAATTACCATCAGCCAT GCCATCAAGGAATCGTGATAACGCAGACACAACCGGCAGCAATTTGTTAA TTTGAAACGTCGTGTGTGTTCCTCTACGAAAAAAAAAACCCAGTTATTTA GCAAGCATTTAAATTGCATTTGTAGCATAGCACTTTAGTTGCGCGTAGGA GGAACAGCAAGGTCGTTGGGGTCGAATGTGAATGTTTGTGATGCAAGTGA CAAAATCAAAATTGGAGTAAATTGGTAGCCATTCCTGTGAGCATTTTCGC GTCGCGTAACGGTAAATCATTGCGCCCTGCGTGTCTTCGTGTGCGTGCGT GTTTGAGTGTACGTTTTTCGGTTTTGTTTTCATCTCCTCCTTGCCATCCT CCTTTCTTCCACCTTCAATTGCCATCTCCTAATTTCCTCTACGAACGGAG AAACACGAAAACGAAAAGTTTCGAAGACCAAAATATTGATGAACTATATT TTTGTACTTGACAAATTTTGAATTCAAAACAGACACTAGCGCACAAAAGA ACCTGTCATTTAGAACATAAGAGGTGAGTTTGTTGATCTACTGCGGGGCC TTTGGACTAATTAGTTTTGCTGTTGTTGCGGCGTTCGCTGATGCTGCTGC AGTTTGCTGCAACTGCAGCTGATATTACTGGTGCATTGGCCGGTGCAACT TTATTAACTGCTCGAGGTTTCAATCTGCGGCTGTCAAATTAAATGAAATT TACACTTTACCGTTAAATTGCCAGGAGCAATGCGGCGAAGCGGTGGCGCC AAACAAAATGTGAGGATAAACCAGCGTTGGAGCCTTCTGGGATTATGCTA AAAATGCTCAAAGTGCAATATAAATTTTTATGAGTGTACGCGCTGAATTT TTACGACTGTCTGGGGGCGGGGAAAATAAATTAGAGAAAATGCCACAGGG AGGACGATTTAAAACAATACAATAGCTTAAAGTGGCAAACGGAAATTGCA TGCAACCAGGAGGCGTGGCACTGTACGCCCCCCGAGCACGTGACGCGCAC ACCAAGCCAACAGCGAAACTAATATAAGCCATTTTGTAGCGCTAATTCGC AGGACACACGTAAACGCAGCACAGCTACGTCTTACGTAAAAACACCACCC ATCTGACACTTGGAAATCAAGCAGAAACCATACACTCACCTCATCATCAT CATCATCAACATGGCCGTTAGCAATATTGTCTGCGAGTGGCTAAGAGCTT TGGGCCTGGCCCAATACGCCGAGAGCTTCCTGGACAATGGCTACGACGAC CTGGAGATCTGTAAACAGGTCGGTGATCCCGATCTAGATGCCATCGGCGT CGAGAATCCTGCCCATAGACACAAGCTGCTCAAGAGCATCCGATCGCTGA GGGAAAAGGGCGCCGCATCCGTTTACTTTATGCTCAACGATCCCAACTCG CTCTCGGGCAGCATGGAGATCCTCTGCGAAACACCACCCAACAACGAACT GGAGCTCGTCCTGCGGGAGCAGCTAGAGACGGACGGAGTCCGGCTGACCG CGCATCCATACTCAACACCGGATGGACAACGCGGCCATTTAGAGGGCCTG GCATCCGTCTATTGCGAATTGCTAATGGCTCCCTTCGGGGACATTTTGGC AACTATCGAGCGGGCGCGCCAGGCGGCCTGGGCGGAGCGGAGTCCGCTGC ACAGTGCCGCCCAGGTGGTGGGCGGATCAGGTGGGGCTGGCGGCAGCACG GGCAGCGGCAGCGGTGGGGCGGCCAGCGGTGGCAGCGGCGGCAGCAGCGG CGTACTGCACCACCGCCAGCAGCATGGCCATCGTGGCCATTCGATGCACG GCGCCGGTCTGCCCAATAGTCATAGCCAGCCCATTTATGTGCCCGGAAAG TACTCGCCCTCGAGTTGTCTGTCCGACAAGGAGGAGGATGAGATTTACGG ATTCGGCTATGGCGTCTTCGCACCCCGCGTGGCCAGAGGAGGGTTAACAC AACAGCAACAGCTGCTGCAGCAGCAGACGCTGCAAACGCAACAGAGCATA CAGCAACAGCAGCAGCAGATGCAACAGCAGCAGCAACAGTTACCAATTGT GCCAGGACAACAGCAGCAAGGACCTCATCAGCATCAGACCCTGCCACCGA ATGTCGCGCATTTGAACTTTGTGCAGCAAAACTGCCTGAGTCCGCGCTCA GCTTATTTCTACGAATTTCCACCGACAGCTGAGGGCCGCGAGACAAAGAA ACGCACCACACTGGCCCGGCTGCTGAAAGGCTTGAAGACTGTCAATCGAC GGGATCGGAACAATCAACAGAATGGCGCCCAGGCCAGGGCGGCTAACGAT CGTCTGCGGCACTTTCAAATGATAAACGGCGGCGCCGGCGGACAGCAGCA CAGTTTCGAGGAGACAATCCACAGGTTGAAAGTACAAGAGGCCATGCGGA AAAAGGAAAAATTTCAACGTGAACACGAGGAGATCCTGCGTGATATTCGA CAGGGACTGTTGCAAATGAGTCGCGGCGAAGGACGCATGGACGATACGTA TATGTACGACGAGGCGCTGAGAACGGGTGGCGGTATGGGCATCGCCGGAC TGGGCATGCCACTCGGTGTGGGCGGCAATGGTGGCGGCGGGGGAGCAGCC CATTATGCGGGTGGCCGTGTGCGCTTCTCGAACAACCGCGAGAGCACAGG CGTAATTTCATTAAGATCCGCCGGAGATATTTCATTGCCGCAACGTGGAC CGCCGCGTAGAGGTCTTATCGTGCCGCAGCAGCCGCCAAATCCACCGACA ATAATACCCTTAACGCACGCCAGATCTCATGATCGCGAAAGCGGCGACTA CGCGGGCTCCATCTCAGATCTACAAAGCGTTACCTCCAGATTCAGTACGG TGTCGATTGGCACCAACAACTGCACGGCCCGCTATCGAACCCTAAGCGGT GGAATTGGGGAATCACCATCGCTGTCGCCCAGTCCATCGTCGGATTACGA GGACATCGGAGTGACCAGGGGCCACGGATGTCTACCGCCCAGCCTGCTGG CCGCTAAGGCCAAAAAGAACGGACTGCCGCACGGCAAGGCGAACACCATT TGCCAAAAGGCCACGGTGCATCATTCGGGCGAGATGCGTAGCTCGGCAAA GGAAATTGGCGCATTTAATGAGAATGGACGAAACTTTGTTGCCACAAAGG ATACGTCGAGGGATTTCAGCAATTCCCAAGATAATACCGACCGTGGCAGC ATGAGCGATCAGGCGTTCGCCTGTTCGGCCAGCTCCGTGGAAAGTTTGCC CAGCGCATCCGGTTCGAGCACCCAGGCTCTGGTTCGTCCTGGCAGTCCGC ACAGCTCGATTTCGGCCGAGGATCGCACCTCGATGGCCAGCTGCATCTGC AAGGCCAAGGCTCTCGTGGATAGTTTGCCCAATCCCTACGATAAGGAGGC ACTCAAATTCAAGAAGGGCGACCTTATCGATGTGCTGTCGATGAACGCCT CGGGCATTTGGAAGGGTCGATGCCACGGCCGCGTGGGCCACTTCAAGTTC ATCAACGTGGAGGTGCTGCCGGAGCAGCGAATGAAGAACTCCAGCAGCAA GACCCTGGCCGCCGGCTCGCGTTTGGCTAATTCTGGAAATGGCAGCCACA ATGGTGGACCCTGCTCCGTGGAGGACCTGCTAATTCGCATTGGACTCAAG GAGTACACCTCCGTCTTTGTGCTCAACGGCTACGAGGACCTGGAACTGTT CAAGGAACTGGAGCCCGCTGACCTGGATTACCTGGGCATTCTCAACCAGG AACATCGTGCCAAGCTGCTGACGGCTGTGCAACTGCTGCATGACATTGAA TGCTCCGATGTGGATATACCCGGATCCAGCTCGGAAAATGATGAAGCCCG CCTGAACAACATCAATATGAAGCATGGAGCATCGCCCTTTGGTCGACGCC ACTTTCCCCGCGACTCTGGATGCTACGAGGGATCCCCGCTACCCAGCTCA CAGACACCTACCCAGGCGGTAAACTCGACGGACGAGTCGAACAGCTTGGA CGACGTGGTGACCAAGTGTTCCAGTGAAATTATGAAGCGCGTGGAGAGCG CCCGCCGTTGCAAGGACAATCCGTTCAAAACCACTCTGCCCGGCGGAGGA CGACTGGGCAAGAAGTCCTTTCTCGGCGGCAACGGCCTTATGGCGGACGA TACGCTCACGCGTGGAGGGCTTAGCGAGAAGTCGAGCGATTCGGGGGTCA GCAGCAGTTCGCTATCGTCGGGTCCGCTGAAGAGCAGCACTTAACATTTG CCCACCATACTGGCCCACGAGTTGCTGCTGGGCGTGGGCTCGGGCATGGG CATGGGTCTTGGTCTTGGCACCATGAGTCATGGCACCACAGGTACCCTGA CGCCCCACGGAGTGGCCACTGCCACCTCGCCTACCGCCCATTCGGCACCG CTGGGTAACATCTGCAACACGCTGCCACATGCACCAAGCTCCTCAGGCGG CGGCGGCGTATCTTCCTCCATGGCCAGCAACCTGCCACTCAACCGGAATC TGGTAATGCTGCGCAATCATCTGCGCAAGAATACGGGCGGTAGCATTACC GGAAATGGCGGCGTAGGAGCTTCCGGTGTTGGAGCACAGCTGCTGCAGGA TCAGGACGACAGACTGGAGGATCAATAACCCATTTACTACATCAAATTCT TAGTTTAGTCTCCCATTGAGTTAAGTGTATTTCAATTGCTGTGATTCGAT AGTGAAAACAAAAGGCCAACATGCGTCTTTCAGTTCAAATGTATAGTATG TATAGAGAGAGATAGACAGACAGTTAAGAGAGAGACCGGTATAGTGGGGG ATGTGTTTAAAGGAAAGAGAAAGATAGCAAGCAGAGATAGTAAGAGTCAG TCAATCCTTCCTCCGATAATGTTGGCATTTACACAAATATTTAACACTTA TATAAATACAGACTTTACAGACTTATATATACATACACAATCTGCAGAAA AGGAGAAATTTTATATACTTAGTGATGTAATGAAAATATTTATATATTTT GACTATATTTTGATTTTTAGTTAGTTTGAAGCTATGCATTGAATGAGACT TGTATGATTTGCCATTTTATTACTGTTTAATTGCTTTGTGTATGCATATT TCTCAACGTGATATTGTCAAACGTCCAACTTGAATTGCATTTTAAATAGA TTCATTTCTAACATTTTAATAAGAGACACACATAGAAGTTGATTCCTATT TTAAGGCACTAATCTGAGTGCAAGCAATAGACCAATTCAATTTTAGCAAC CAAGCAAAACAAAATATTTATAAACAAAAATAGAAAACATAAGAAGAAAC AGAACACCAACTGCCATTCGAAACTAATTTTAATTTGTTAATCTCGTATT AGGACAATGTAAATGGAATGAATGCATCGTGCAAATCCGTCAGAAACTTG TAAAAATTAATGCCGAAAATTGCCAAATCGAGCAAACAAAAGTAATGTAC GCTAAGCAATATTTTCAAATCGTAGCGTGTCGTGTCCGGATCGTGTGTAC ATATATAGGATGATCCAGTTAAGATCTATTATGCCACTTATAGCAGATAT CAGATCGTAAACACTATGAGCGATTTAGCGTTAATCAAAAGCAGACAATG AAATTAGTCAGGCAGCGCAAATGTTTTTAATCAGTTTTCAGCAATTAGTT AAATAAATGAACGAATATTTATCACGGCACAAGAACTACGAATAAAATAT TTAAATTAAATCTGATTAAAATACATAATAATTAATAGCATAACTAAGCG TAGAGCATATGATTCTAATATGGCAATTGACAAAATGTAAATGAGTTTAT TCGCAAAACGCTTTGACTTTTACTCAGAACGTAATTAAACCTGAACATAT TTTGTGACATAAGATATCGATATTCATATTGTAACTCAATTAATTCTAAT CGCAAATAAATTAAATCAAATTTAAACAAAAAACAAATCGCACGTGTTAC AGCCCGACGAAGATAAGGTTAAAGACATATATATGACAAGAGGATGTGAA ATACTGGACTATAGGCATTTTTTTAAATTTAACTCCAAAGTACATATAAG TGTTTCAGCTGTAAATTGTAACAAAGTCAAAAGAATATTTATATATTTAG AGATGGACGAGAAGCAAACACAAAACGAACACATCCGCACAGCATGTGCT AGCATTTTCTAATTATCACTGTAAAATGATGTAATTTAAAGACAGAATAT ATAAGCAATATTAAAGTTTAACCTAACAAGGAGCCACAAAATCGATCATA AGGTCAACACATTACAATTGCAAAACAAAACAAAAGAAAAACCAGTAAAA TTCCAATACACAAAGTAAAACGAGAGCGCAAACTAAAGTATTCAGAGTTC AGTAAATTTTAGAAGAAATTTTCAAAAATAAAACCAAAACTCGGTGGATA ATGATGATTCATGTTTATGCATCAATCAAAATAAAATTCTTTAAATAAAA ATGAACATATCTAAAAAGT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) SKIP-RB FBtr0084197 5049 SKIP-RE FBtr0301028 5788 SKIP-RF FBtr0305036 6584 SKIP-RG FBtr0305037 6489 SKIP-RH FBtr0310203 508 SKIP-RI FBtr0330381 5049
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) SKIP-PJ FBpp0307693 1027
Derived from OTHER transcripts	Name FlyBase ID Length (aa) SKIP-PB FBpp0083595 952 SKIP-PE FBpp0290250 1064 SKIP-PF FBpp0293573 1064 SKIP-PG FBpp0293574 1034 SKIP-PH FBpp0301887 128 SKIP-PI FBpp0303407 1080
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001275899
Synonyms
	SKIP-RJ
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]