Transcript Dmel\CG9990-RG

General Information
Symbol	Dmel\CG9990-RG	Species	D. melanogaster
Annotation Symbol	CG9990-RG	FlyBase ID	FBtr0336787
Feature type	mRNA	Associated gene	Dmel\CG9990

Evidence Rank	Moderately Supported	Length (nt)	3586
Evidence Score	7

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 49 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	617 14743 35672 45703 83528 106824 153321 161385 164582 164618 191100 CK01.5C.D3 CK01.17C.H1 CK01.26B.H10 CK01.59A.F12 CK01.62A.C5 CK01.72C.B8 CK01.77D.F7 CK01.144A.C2 CK01.144C.D3 CK01.145C.A4 Dmel_dig_007377_0655_1839 Dmel_dig_009875_0654_3036 DMG7-chr3R.42.014.pred.a DMG7-chr3R.42.014.pred.a.5prime EC259508 EK008811 EK023063 EK049911 EK057440 EK060624 EK117632 EK118641 EK119114 EK119603 EK119634 EK121108 EK122055 EK145933 EK206006 EK216920 EK232245 EK293630 EP15748 HL02401
End(s) extend beyond the annotated transcript, internally consistent	35432 102440 EK146135 EK225540
Sequence
	CGTTTATAGTCGCGCTTGAAACGCACGTGCAAAAGTGCAATCGCCGTCCG CTCGCTTACCGCTCGCTCGCTACCTCTCTGTCGCACTCGCTCTTGCGCTG CCTCCATCTCTGTCGCATCCATTGACAAAGTGTAAAGTGCAAAGCTAGCA GCGCCAACGTCGACGCAGCGCCAGCGTCTCAGCATCAGCTTAAGTCAACT CAGCTCGGCTCAGTCCGCCTTTTGGCCAGCGACTCAAAGTCAGTCTTGGC CGAACCTTTCAGCGCAACGCAAGTGCTCCGGTTATACGCTCCCTCGGTCC GTTCGTCGTTTTTTGTGTGAACCCCCGTGGAACGTCGACAGATCCCATTC ATCGGCGATCGAGATTACAAGCGATCGCGTTCGTGTCCTAAGTCTTTCGT TTGGCAAGAAGTGGATTATAAAAAGAAACCCGCGAAACGACTGAAATTGT GTGCAAACATATTTGCTCCCAGGCCAACTAGTACGCGCATTTATTTCCAC AGACTCCGCGATGGCGGCCACAAACAACGATGGTGGCACGCAGCCGAATG CCGTGGCGGCATGGGGTGCTCCGGCCAATGGACCCCGGAACACACAGGCC GCCGTATCCGTGCGGCATGCCTTCAAGGCGTACGGAAAGAAGAAGAACGC CAACCAGGTGCTGAACAACCTGAACATGACCGTGCCCAAGGGAACAATCT ATGGTCTTCTGGGAGCCTCCGGATGTGGCAAGACCACCCTGCTCTCCTGC ATCGTTGGACGTCGTTACATGGACGCCGGTGAGATCTTTGTGCTGGGCGG CAAGCCCGGCACTAGGGGATCAGGTGTTCCCGGAAAGCGTGTGGGCTACA TGCCCCAGGAGATCGCACTGTACGGAGAGTTCTCCATCCAGGAGACCATG ATGTACTTCGGCTGGATCTTCGGCATGGATACCAAGGAGATCCTGGAACG TCTACAGTTCCTGCTCAACTTCCTTGATCTGCCGTCGGAGAAGCGACTGG TGAAGAATCTCAGTGGTGGTCAGCAGCGTCGTGTGAGTTTCGCTGTGGCC TTGATGCACGATCCAGAATTGCTGATCCTGGACGAACCCACCGTGGGTGT GGATCCACTGCTGCGTCAGAGCATCTGGAATCACCTGGTGCACATCACCA AGGCGGGCCAAAAGACGGTCATTATTACCACACATTATATTGAAGAGGCA CGACAGGCGCATACGATCGGTCTGATGCGGTCGGGTCACCTGCTGGCCGA GGAGTCACCCAGCGTCCTGCTCTCCATCTACAAGTGCATCAGCCTGGAGG AGGTATTCCTCAAGCTGTCCCGCATCCAAAGCCAAAAGGGCGATGTGACC CACGTGAACTTCAGTAACAACATCTCGTTGCACGCCATGGCCTTTGGCAG CAAGATGGACAAGCCGAGTTCCAGCCAGGAGGGCGGCGTGGTGGGCCTCA ACTTCCACCAGAGCAAGGAGGTGCTCATTAACGACAGCAATGGCTCCATC TACACGCTCAACCAGGAACCCTACAGTCCGCCGCCGTCCCGGCGCAACAA TAATCCCAATGATGAGGAGAGCTGCCAGGACTGCTATTCCAACCTGTGCA AGATCACCTCCAAGGGCAAGATTCGCGCCCTGCTCACCAAGAACATGCTC CGCATGTGGCGCAACGTGGGCGTCATGCTCTTCATCTTCGCCCTGCCCGT CATGCAGGTGATCCTTTTCTGCTTGGCCATCGGACGAGATCCTCAGGGCC TTAACCTGGCCATAGTCAACGGAGAGATGAACGACACGGAAAACTGCTAT TGGGAGGATGGATGCCACTTCAAGAACCTGGGATGTCGTTATCTGAGTCA TTTGAATACGAGCGTAGTTAAAACATATTATGAGGACCTGGACGATGCCA AAGAGGCCGTGAGAAAGGGCACAGCTTGGGGGGCGGTCTACATCAGCGAG AACTTCACGGACGCCTTTATTGCCCGAGCTAATTTGGGACGTGACTCCGA CGACGAAACGATCGACTCCTCCGAGGTCAAGGTCTGGCTGGACATGTCCA ACCAGCAGATCGGCGTCATGCTCAATCGGGACATCCAGTTGGCCTTCAGG GACTTCGCCATGGGCCTTCTCGGCCAGTGCGGCAGCAATCCGAAATTGGG CGACGTGCCCATTCAGTTCAGGGACCCCATCTACGGCACCATGAATCCAT CGTTCACCGATTTCGTGGCACCTGGCGTGATCTTGACCATTGTATTCTTC TTGGCTGTCGCTTTGACGTCATCGGCTCTGATCATTGAGCGCACTGAGGG CTTGTTGGATCGCTCCTGGGTGGCTGGCGTCTCGCCCTTCGAGATTCTAT TCTCGCACGTGATCACCCAGTTCGTGGTGATGTGCGGACAGACCACTCTG GTGTTGATCTTCATGCTGGTGGTGTTCGGGGTTACCAACAACGGCGACCT ATTCTGGGTCATCGTGCTGACCCTGTTGCAGGGCATGTGTGGAATGTGCT TTGGCTTCCTCATCTCCTCGGTGTGCGAGCTGGAGAGGAATGCCATACAG CTGGCGCTGGGCTCCTTCTATCCCACCCTGCTGCTGTCTGGAGTGATCTG GCCGATTGAGGGCATGCCCGTGGTGCTGAGATACATATCACTGTGCCTGC CACTAACGCTAGCCACCTCTTCGCTGCGCTCCATCCTCACACGTGGCTGG GCGATACTGGAGTCGGATGTGTACATCGGCTATGTGAGCACGCTGTCCTG GATTGTGGGCTTCCTGGTGCTGACGCTTCTCGTGCTGCGAGCCAAACGCG GCTAGGATCTTCAGATATTACGCTACTTTTAGATGCCTAACTTTAGAACA CGATAAGTCGTCCTAATTAGTTTACACCCACTTCGGGTCTTCTTCTTAAT TCCACTTTCGAGTTTCACTTCCCTTCGTATCTGCCCAAATGTCATAAATT ATTTAAGCACATTCGCAGCTTTCCTTAGCTTTCCACTCGGCACTCGTTTT TCCTTAGACTAAGTTCCGCACTTTCGTAGTTTAAAGCGTAAGGTTTAGGT ACTCCTAAATGAAATGTTGTAAATATTTTGTGTCACGAATTCAGTAATCC GTTGCTCTAGATGTCCATTATTTGCAACCCTCTGTACTAGACCTTTTCTC GACGCCGACACGGGCAGTTTATCACATACAAACGCAACTAATTTTATATA TTTTCAATGGACTGTGATTGTTTTTTCTACATAATTCACGCGAATACACG TAGGGCAAGCCTAAACAAAAAGAAAACACAATGAAAACGAACAAAAACAA TGGTGGGTTTTGTTATTAACATTAAGTAGCTTAAAGCATTTTTGTATGGG TTTAAGTTTTTTAAGGTAAAACATAATTAAATACAATAATGTACGCAACC CTAAAGAGTATGTAAAAATATATTTCAGGAAATATTTTGCGCAGAGCATA AATATTTCACAACGAACAAACATAAGACAATGAACAACGAACAAGTGAAA AACGTTCTTATTTAAGTAAATATTAATGTGAACGCAGTTATGTATAAATA ATAATAAAGCGTGAATAAATAAATAAAGTTAAATTT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) CG9990-RA FBtr0085308 3746 CG9990-RB FBtr0085309 3802 CG9990-RD FBtr0303343 3760 CG9990-RE FBtr0305087 3145 CG9990-RF FBtr0305088 3555
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) CG9990-PG FBpp0307763 764
Derived from OTHER transcripts	Name FlyBase ID Length (aa) CG9990-PA FBpp0084677 808 CG9990-PB FBpp0084678 777 CG9990-PD FBpp0292406 763 CG9990-PE FBpp0293624 766 CG9990-PF FBpp0293625 775
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001276111
Synonyms
	CG9990-RG
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]