A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\CG1889-RE

General Information
Symbol Dmel\CG1889-RE Species D. melanogaster
Annotation Symbol CG1889-RE FlyBase ID FBtr0336906
Feature type mRNA Associated gene Dmel\CG1889
Evidence Rank Strongly Supported Length (nt) 1227
Evidence Score 15
Map ( GBrowse ) GBrowse View Help detailed view FBtr0112968 FBtr0071429 FBtr0336907 FBtr0336905 FBtr0112969 FBtr0336906 FBtr0071408 FBtr0307591 FBtr0307592 FBtr0307593
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 3 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence 
CACACTTGCATTGCGCCTCAGATCAGTAGTTGATGTACACTTTGCGGCTT
AGTTAGTTAGTTAGTCAGTCAGCCAGTTAGCTAGTCGGCCAGTAATCGAA
AGTGCCAAAATGTCACAGATGCTGCAGCTGGATGCCTTGGTCATGGCCAT
GGCCTGTCTATCCACCACACAAACGGATCTGGGCGGAGGACTGTTGGTTC
CGCCCTCCTTGGGAAATGCGAGTTCCAGCAGCTGTCCAGTTTCGGCTTTA
AGTGGTCTTACCACTCGAATGCAATCGCTGAACAACGAAATAGCTAGTGT
CAAGGAGCAGATAGGCAGTCTCCAGGAGCAGTTGGTGGATCTGCGAAGAG
CGGGAAGTGCACCGGTGGTGGGACTCGCTTCGCCCAATGCACTGGCATCT
CGATTGTAGCCTAGACATTGAGCCGCAACTCCTGGCCAACGGTGGTGCAG
CGGCCGTTCCAATCACTCCGGCAAACTGCCTGAAACAGCAGCACGGTGTG
GTGCGAATCAGACCCCGCTCGAACGTGGAACCGTTCTTTGTTTTTTGCGA
TCAGAAGGTCAGAAACGGTGGTTGGACAATGGTAGTTAATCGTTATGATG
GCAGTGAGGATTTCAATCGAAAGTGGGCGGATTACAAGATCGGTTTCGGG
CCACTAACCACCGAGTTCTTCATCGGATTGGATAAATTGCATCAGATTAC
GAGCAGTGACAACTATGAGCTTTTGGTTCAGCTGCAGAATCGAAAGCAGG
AGCTGAGATATGCCCTATATGATCACTTTAGCATCGGCAGTGAATCGGAA
CAGTATCGTCTGAATGTCTTGGGGGATTATCACGGCGATGCTGCCGATGC
ATTGCGTGACCACACGGGAAAGAAATTCAGTACCCACGATAGGGTTAATG
ATGAAAATGAGCAAAACTGCGCGGCTCAGCAGTCGGGAGCTTTTTGGTAT
GGCGGCTCTTGCAATCTCACCAACCCATTTGGCCTATATCAACGCCTTCT
AGAACGGGATGTTGATGGTTTCAAGGGCATTCTATGGCGCGGTTTCTTAA
ATGGACCCAAAGGTTCCCTGAAAATAGTTCGCATGATGGTTCGTCCACGC
GCCGCTTTATAAATAAGTAACTTTATTGACTACACCAGTCGCATATTAAA
CAAACGCCCAACAAGTTAAGAGATAAAAAAAAACAAATGTAATACAAAAG
ATTAATTAAAAATTAAATTCTATTTAG
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
CG1889-RA
FBtr0071408
1468
CG1889-RC
FBtr0112969
1223
CG1889-RD
FBtr0336905
1241
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
CG1889-PE
FBpp0307846
99
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
CG1889-PA
FBpp0071343
332
CG1889-PC
FBpp0111882
332
CG1889-PD
FBpp0307845
338
 
hide Comments
  • Evidence supports alternative splice leading to premature stop codon and/or downstream start; may or may not produce functional polypeptide.
  • Transcript terminates at site supported by polyadenylated cDNA.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
•
hide Synonyms
CG1889-RE
 
hide References ( 1 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]