A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\Aldh-III-RU

General Information
Symbol Dmel\Aldh-III-RU Species D. melanogaster
Annotation Symbol CG11140-RU FlyBase ID FBtr0336912
Feature type mRNA Associated gene Dmel\Aldh-III
Evidence Rank Weakly Supported Length (nt) 2115
Evidence Score 3
Map ( GBrowse ) GBrowse View Help detailed view FBtr0088975 FBtr0088997 FBtr0300478 FBtr0300477 FBtr0310676 FBtr0088993 FBtr0310677 FBtr0300479 FBtr0310675 FBtr0336912 FBtr0088996 FBtr0310674 FBtr0300480 FBtr0308198 FBtr0300481 FBtr0300082
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 18 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence 
CCACTCAGTGTCGACCGGCATTTGCGTTGAAAAGGTGTGTTCTGTTCTCG
GAGAGATTAAAATAGCGAATTCAGAGTGTTTTTTTTGGAACCAGAACCAG
AAACCGAAAGTCCAATTGGGATCTTCACATCACAACCGGAAAGTCAACAA
CAACAACCCGAGCAGCTCCAATCCGAATCCGAGTCCGACAGAATGGCCAA
TTTTGACGATACGTTGCAACGCGCCCGCCTTGCCTTTTCCAGTGGAAAGA
CCAGGAATGTCAGCTTTCGACGCAAGCAGCTGGAGAATTTGCTGCGTTGC
TATGAGGAGCACGAGAACGAGATCATCAGCGCCTTGGAGGCGGATCTGCG
ACGTCCCAAGCAGGAGAGCCTCATCGTGGAAACGGAATTCATGAAGAACG
ACATCAGGCACATCCTATTCCAGCTCGACGAGTGGGTGCAGTCGGAGAAG
CCGCCCAAGTCGTTTGTGAACATGATGGACGACGTCCAGATCTACAATGA
CCCCTTCGGAGTGGTTCTGGTGATCGGCGCCTGGAACTACCCGCTGCAGC
TGCTGCTCGTGCCAGTGGCTTCCGCCATCGCCGCCGGAAACTGTGTGGTG
ATCAAGCCCAGCGAGATTGCCGCCAACTGCGCCAAGTTCATTGCCGATGT
CATTCCAAAATATTTGGATAATGATTGCTATCCAGTTGTCTGCGGTGGAC
CCAGCGAAACGGCGGAGCTGCTCAACCAGCGTTTCGACTACATCTTCTAC
ACGGGCTCCACGCGCGTAGGCAAGATTATCCACGCCGCGGCCAACAAGTA
CTTGACCCCCACCACCTTGGAGCTGGGTGGCAAAAGCCCCTGCTACATTG
ACAAATCTGTGGACATGCGCACTGCGGTCAAGCGCATCCTGTGGGGCAAG
CTGATTAACTGCGGACAGACCTGCATCGCTCCGGACTACATCCTCTGCTC
CAAGGAGGTGCAGGAGAAGTTCATCGTGGAGGCCAAGGACGTGCTGAAGG
AATGGTACGGCGAGAATATCCAGAGCAGTCCGGATCTAAGCCGTGTGATC
AACGCCAACAACTTCCAGCGCCTTCTTGGCCTAATGAAGTCCGGCCGCGT
GGCCGTCGGAGGTAACTACGATGCCAGCGAGCGTTTCATCGAACCCACCA
TCTTGGTGGACGTGAAGGAGACCGATCCCATCATGGAGGAGGAGATCTTC
GGCCCCATCTTGCCCATCTTCAATGTGGAGAGTGCCTACGATGCCATCAA
GTTCATCAATGCCAGAGAAAAGCCGCTTGTAATTTACGTGTTCTCCAACT
CGAATAAGCTAGTTAAGGAGTTCAGGCGGAGCACCACCAGCGGCGGATTC
TCCAGCAACGAAACCATAATGCACTGTGGAGTTGATGTGCTGCCCTTCGG
AGGCGTCGGCATGAGCGGCATGGGCAGATATCATGGAAAGTACGGCTTCG
AGACCTTCACGCACAAGAAATCTTGCCTGGGCAAGGACTTATCCCCGTTG
GGCGAGAAGTTGTCATCAGCTCGGTACCCACCCTACTCGGACCGCAAGGG
ATCGCTGCTCTCGTTCCTGCTGCGCAAGCGCCGTCCGCTGCCCAACCTGC
ATCTGAGCCACGTGCTGGCCATCGGACTGGGAGTCGGATTGACGGTGCTG
ACCAACTACTACCTACAGGTAAGGAAGGGCAAGCTGTTGTCGAAGTAGAA
ACTACATATGATGCGAGCCGGAGCTGGGTGAGCCTGCGCCAGAGGATTCC
CAATCAACCAACCACTTAATATTGTAATTGTTTGCAATAAATGTTTAGGC
GTAGGCATAACTAACTTCATTGCACATTCAGACAACTCACATAATAGAAA
CTACTGGGCCATCTGGTGTTGTATTTTACACTGCAATATGAAATTATATA
TATTTGAAATCGTCGACAAACGCCTGCAATTTTGTACTTTCAGAAAAGCT
CAACTGATTAATGGGCCGAGAACTTTTTTCTTTTTATACGCATATCGGTG
GGTGATGTGAAGCTTTGGATACTTCGATATACATATAGTTATTGTTATTT
AGTTGCTATTTAATACAAATGTGAATGCTGTAATGTAATGTACGACAAAT
AAACAGTCAAAAATG
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
Aldh-III-RE
FBtr0088996
1840
Aldh-III-RI
FBtr0088993
2305
Aldh-III-RK
FBtr0300477
2233
Aldh-III-RL
FBtr0300478
2144
Aldh-III-RM
FBtr0300479
2052
Aldh-III-RN
FBtr0300480
2352
Aldh-III-RO
FBtr0300481
2448
Aldh-III-RP
FBtr0310674
2306
Aldh-III-RQ
FBtr0308198
2923
Aldh-III-RR
FBtr0310675
1840
Aldh-III-RS
FBtr0310676
2233
Aldh-III-RT
FBtr0310677
1840
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
Aldh-III-PU
FBpp0307851
501
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
Aldh-III-PE
FBpp0089176
497
Aldh-III-PI
FBpp0088066
498
Aldh-III-PK
FBpp0289704
498
Aldh-III-PL
FBpp0289705
498
Aldh-III-PM
FBpp0289706
498
Aldh-III-PN
FBpp0289707
563
Aldh-III-PO
FBpp0289708
563
Aldh-III-PP
FBpp0302794
563
Aldh-III-PQ
FBpp0300518
564
Aldh-III-PR
FBpp0302795
497
Aldh-III-PS
FBpp0302796
498
Aldh-III-PT
FBpp0302797
497
 
hide Comments
  • Transcript terminates at site supported by polyadenylated cDNA.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
•
hide Synonyms
Aldh-III-RU
 
hide References ( 1 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]