Transcript Dmel\CG5953-RD

General Information
Symbol	Dmel\CG5953-RD	Species	D. melanogaster
Annotation Symbol	CG5953-RD	FlyBase ID	FBtr0337091
Feature type	mRNA	Associated gene	Dmel\CG5953

Evidence Rank	Strongly Supported	Length (nt)	4576
Evidence Score	11

Map ( GBrowse )
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 135 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	RE18252
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	34770 71522 71680 103620 173016 214413.26 214475.28 EK144408 EK144623 EK199364 EK199523 EK255237 EK273323 EP00602 IP17810 LD03463 RE05086 RE29756 RE33407 RE62386 RE62986 RE72477 RE72528 RH02144 RH04193 RH09674 RH40337 RH46854 RH52560 RH53979 RH57252 RH62926 RP003019925 RP003083575 RP003091707 RP003103228 RP003119140 RP003139232 RP003144288 RP003145014 RP003149138 RP003175670 RP003180639 RP003185569 RP003187394 RP003193314 RP003195241 RP003199301 RP003205391 RP003213283 RP003220291 RP003230657 RP003232132 RP003236894 RP003246932 RP003249343 RP003252920 RP003256035 RP003258037 RP003268674 RP003270822 RP003272767 RP003274339 RP003282120 RP003282729 RP003284140 RP003288088 RP003294229 RP003298725 RP003315660 RP003318966 RP003329618 RP003333211 RP003336746 RP003339619 RP003340658 RP003355328 RP003355819 RP003357274 RP003357753 RP003382263 RP003396709 RP003398962 RP003398993 RP003413705 RP003421748 RP003423604 RP003424460 RP003433362 RP003442843 RP003490760 RP003495330 RP003498790 RP003502880 RP003503420 RP003503698 RP003507055 RP003508419 RP003513106 RP003514993 RP003553545 RP003559966 RP003561203 RP003562373 RP003562662 RP003562770 RP003566870 RP003569473 RP003578998 RP003579502 RP003593346 RP003596220 RP003601991 RP003604918 RP003608949 RP003613176 RP003616288 RP003625764 RP003630770 RP003631867 RP003634037 RP003635406 RP003641972 RP003657341 RP003663059 SD04335 SD08011 SD09413 SD18209 SD22404
End(s) extend beyond the annotated transcript, internally consistent	RP003080590 RP003336901 RP003487193 RP003589037
Sequence
	AATAGGTTTGCGACTGTTTGCCCGAACAGTCGACGAAATCCGGTACTCGC GAGCGGTTGTAATTAACGGTAAAGCTGTAGTTGTTTCGATGAAATATTGC GCGCGTAACGGGAAAAATACGGAGCCGTAAAAGCGCAACAGCGCCTTTGA AATAGCGTTAATGAAAGATAGTGAACACAGTGCTAAATGAAAGATAATGA GACCCAGTCGACAGGACCCAAGAAGACGATGTTGATTGAGTGCATTTCGC GTGACATTCCCTGAGAGTCAGCTTCGCAAATCGCCAGAAAGCAGAAGTAA AGCTCAAGTGTCGAGCTCGGCTGCACAGATCTGTACATATATATATATAT ATATAAACATATACATATATAAGGCAATCAACCATCCAACGATCGGTTGA GAGGCGTGGCAAATGAACTTCAATCCGGCCAGCGTGGTAGCCGCCGCAGC AGCAGCCGCACATCAGACGACCCATCTTCACCACCATCACCATCATCATC CGTATTTAAGCCATCACCAGAGCAGCATCACCCAACCACAAGGACAGCAA CAACAGCTGATCCCACTGCCTGTCGGCGGAGGAGGCGGAAGTTTACCAGT GGGTGGCAGTGGCGGTGGCGATACATCGCCCAAGATCATGGAGTGGACCA ACGACGATGCTCTGGAGCTGATTGAGCAGTATCGCTGCCATACAGAGCTA TGGAATCGTGCCGATCCCAAGTACAAGGATAAACTATGTCGATTCCGGGC ATGGTCGGAAATAGCCGAGCGTTTCGGTTGTAGCAAGGCGGAAGTGGAGC GGAAGATGAACGTACTGCTCACACAGTATCGCCGGGAGAAGCACAAGATG TTCGTGAAGATATACCAGGGCATACAGCCCAATCCGTCCAAATGGTATGC CTTCAAGCGATTCGATTTCATGGAGGCGGGCGGCGGCAGCCTGAGCGGCG GTGGGTCCGTGGGATCCGGTGTTAATGCCGCCAGCGGAAACCTGGTGCCG AATCCCGTTTCCTCATCCGCTGCCGCTGCCGCCCACAACGGGCTAAACGG ACTGGCTGCCGCGGCAGCGGCCTACGAAAGCGGTACGATTGCGGCGGCGG GCAACGGAGGAGCACCACCCACTGTACCAGGTGGCGGAGCACCTGGCTCA CAGACCGTCATGCAGCACAGACGCATCAAGACCAAAGAGCTGAAATATTT CGGAGCGATGGGCCTGAACATACCCATGTTGATAGCGAGCAGCCAGACGC TGGACAGTTGGAATACGGCGGGTCAGTACTCGCCACCGATATCGGGATCC GGCGGCGGTGGATCCGAGCGAGGAGGAAGTGCTGGAGGCGGCGGAGTGCC GCCACAGCAACTGCGAGTACCGCTGCCGATGAGCTATCATGGCGGAGCTG GTGGTGGAAGCAGCAGTAGTGATTTCCAGCAGAGTCCCCTGAAGACCATG GACACCTCGGACAATGAGGATAATAACAATACCAAGGAGGATGTGGCGGC GGCAGCGGCACTGGGACAACTGGCTGCCAAGGTCGAGCTGCGATCGCCGG CGGGCGCAGGTCCTGGCGGTGGCGGTGGTTCGAGCAGTAGGGAAGCCAAT GATCCAACCAGCGATCCCATCAAGCCCGACCGCACTCTAAGCGAAGCTGG CAGCAGTCCCATACCGAATACCAATATGCACGAGGCGCACAAGAATCACC TGCTAAACAGTCCCGCCGGCGGAAGGTCAGTCACGCCGCGGCAGGCGCAT GAGCAGCTGCATCACCATCCGCACACGCAACACCACCTGCAACAGCAGCA GCAACAACTGCAGCAGCAGCATCAGCAGTTGCAGCAGCAACAACTGCAAC AGCATCAGCAACAGCAGCAGCTGCATCACGGCCACGAGGAATTGGACATC AAGCAGGAGTTGGTGGACTATTTCCATGGTCAGGCGGCTGGCGGTGGTGG TGGTGGTGGTGGTGGTGTTGTTGGTCCTGCACCACCGCCACCACCCGAAT CGCATCGTTCCTATAGCTCAGCGGGCGAGGAGAGTCGGCTCCAATTGGTG GACATGGCCCAGGACCTGAGAGTCGCCCAGGCGAAGGCCAATTTCGGTGC TTTCATCCTGCCACCCAGAGGCAGTGATGCCAGCACACCCGCCATGCCCT TAAATATGCGAAAACTGACCGGCGCCGGCAGTGCGGGTCATATGCTAATG AATTCGCTGCTGGGCTCCAGGGAGAGCATGTCGGATGGCGAGGAACCCGA TCCGGATAACGATGAGGCCACCGAATCGGCCGCCAGTCCGGGTCACATCA AGAGCAGCGTTTCCGCCCAGGCGGCCGTTGCAGCGTCTGCCTTTTATGCC GAGTCCCTGAATCGAGATGATTGCGATTTTATTGGATCGAATGTGTCCCT CAAACTGCGGACCATGGATCGCACGCAACGAATCATTGCGGAGAAGCTAA TCAGCGAGGTGTTGTACTATGGGCAATTCAACGAGCTGGAACGCTCGGCG CGGATACAGCCCAAGTGACAGTGGCGCCCCAAGAAGTGGACGGCTGCGAT GGGTAACGGAAGTAGTGGGGCCGTTGGTCTGGGCATCGGTGTGGGTTTGA GCAGGATCAGGCTGGGCAGGAGCCTTCTCGCCCCGCAGCATGGCAAGTGA ATTCCATTTGATGAAATAGTCGACAGAGAGTAGTAGGCAAATACAGAGAA CACAGTACAACTTATTTTTAGTTTGGCCAGGATCGGGGTCACCACTTGTA CAAAGCTTGGCTTGAACGGGGGCAGTGTTACTTAGCCGGAAAGAAAGTGG GAGAGAAGTGGGAGAGTGGGAATGAAAGCAGAGAAGGGCTTGGAGAAAGG TACTTATGCAACAGGGAGGGAGAGATGCCGATGCTGAAGGGTTCAATCAC GTTTTGTCATACTTCAAAAACTAGCTAATTGAAAAGATGGTCGTCAAGCA ATTAGGAGTAGAACAATTATGTCATATGGTTTGAACATTCGAAATGTGCT TTTAATGCGTGCAACGTTTAAATTATTAAGACCAAAATTTATTTAGGTTT ATTTATAGAAAACATTAGGCGAATGTGTATTTTGTTAGCGTGAATTAATT TATTCTGTCTGTGTAAAGTTTAGACCATCTGCCATCTCTCCCTGAGGAAA AAACACAAAAACCACAATATAGAACACAAACCAAAGTTACTTTCTATTCT GTTCGAAGGGCTGCCTAAACAATAGTTTAGCTTGTGTGTCCACCAACTTC AATATTAAAATACATGAAATACATAAAATACATAGATACTAGATAGGTTA CAAATATGGGTCTGGGGACTGGGGATCAGCGACACACCTGAGACGTCTAA CTAGCAGAATCTCAGTATTAACTATAAAATACACTTTACATAGGGATCCA AGCATTTGCCATAGATCGTTTCCTTTGGGGCCCGATCGTCCACTTCTGGG TGTTCTTCTCTGATTGCTGGGTTCGAGCCCCTCGAGCCACAAACAAACCA GACCTCGCCCCCTAGAGCAGAAATACAGAAATTCAAAAAAAGAAAAAAAA CTAACAATAAAGAAGAGGAAAAGTAAGCAAAACTAGCGTAAAGACAAGGA AAAGCGGCTGCTAAAAAGTCAAGCTCCAATTTGGGCATCACTGAAACTCA TGTTCCCGAGAAAAGCTAACCGTTGAGAAAGGCACTTATAAAATGTATAT GTTTTCTATACATATATCTGCATATGGAGGATATATGTATGTGTATGTAA ATGGATAAAAAAATATATAATATATATCATTGTACCTTATTTTGAAACAG AGATGTTTTTTTTAGTCACTTAAGTAAGTCTGGTCGTCGAAAAGTCACCA CGATCCAAACCCAACAACTGAAACCAACCAAGAAAACCAACAAACAAAAA GCAACCGCAAACTTTTACCTATATTATACAAATACAAATACAAATACAAA ATACTGTCGTCACTAGTTCGTTAAAGAAACAACAAAAAACCAACGCAAAT GCAGAAACAAAGGCGAAATATTGTACATTTTCGTGTTTATTTTTTAGGTC CTATTGATTTTTGCATAATATTTAAGTAGCTTTTATTTTTATATGCAAAG CAAAGCAGAGCAAAAACAGAAACATTGAATTAATTTATATGAATATATAT ACATATATATATATAGATACATAAACCTAATAAAATATGGGCAAATTAGT TAGTCACATAAACGAGAGAAAGAGATAGCTGGTTAGTTGAGGATGATGAA ATGCAGTTCGGCTTTTGCTGCTGCGTTTTTTAGCCCTAGTTTTTACCTTA GCATAGAACAACAAAATCAAAAAAAAAAAAACAAAAAAACAAAAACAGCA TAAGTCCAAACCGAAATGAAAAGTCATGTGTAAAAAAAATGGAAAACTAT ATGTGAATAAATTAATTGTGTGTAAAATTAGCGAGAATTTGTTTGGCATC AATATGCAAATCGTGTGTTTGTGTGAGTGCGTATGAAATGCAAACCAAAA TTAGTTTTTCCTGAATGTGTAAGCAGCAGCTAAAAAACAAATAAATGTGT GTACCTATTTGTCTGACAAGCATTGT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) CG5953-RA FBtr0080873 3534 CG5953-RB FBtr0080874 3796 CG5953-RC FBtr0301144 2535
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) CG5953-PD FBpp0308008 701
Derived from OTHER transcripts	Name FlyBase ID Length (aa) CG5953-PA FBpp0080430 701 CG5953-PB FBpp0080431 701 CG5953-PC FBpp0290367 473
Comments
	Extended 3' UTR based on RNA-Seq and/or EST data.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001273574
Synonyms
	CG5953-RD
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]