A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\trpm-RG

General Information
Symbol Dmel\trpm-RG Species D. melanogaster
Annotation Symbol CG44240-RG FlyBase ID FBtr0339079
Feature type mRNA Associated gene Dmel\trpm
Evidence Rank Strongly Supported Length (nt) 7419
Evidence Score 11
Map ( GBrowse ) GBrowse View Help detailed view FBtr0087371 FBtr0339077 FBtr0339078 FBtr0339076 FBtr0339082 FBtr0339075 FBtr0339083 FBtr0087393 FBtr0087394 FBtr0339081 FBtr0339079 FBtr0339074 FBtr0339080 FBtr0087392
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 16 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence
AATTTGTTGTTGGTTCTCCAACATGTGCGGTTCGCTTGGCGCATTTAAAT
ATTTTTTAAAATAATTAACAATTGTGTCGACGTTTTGCTGCTTAACCGTT
ATCGTGTGTGTACCAGTGTTTTTTTGTGATTCGTGTGAGCCGTATCCCGT
TCCCCGCCAACAAAATTTTGCGGAGACCGACATAATAACCATTAAAGCAA
TTACAACAATTATAAACAACAATATCGAAATGAGCAATACAAAACGCATG
AACTTGAAAAACAAATTTAAGCATGCTTGATCCAATATTCAGGAGCCCCC
AGAGCAACAGCACCAACAACAGCAGCATCCGCATTTTCCCTCATTCAGCA
TCAAGTATACGGAGAGACAAGTATTTCTGCTCCAGCGTTTTCCATCTGGC
CGCGTTTTCCGACTCTACTAAGTGTTTTCCCAGACCATCATCAACTATTC
CGCCCCGATCCGCCGCCTTCGTCAAGTCGAGCCACACATGTTGGGTAAAT
TCACATCGAACCATGTCCAGGTCTACCATCAGTACTCGCGACCTGTGCCC
GTAAAGAAGCCTGTCAAGGCCAAGAAGCCTCACTCGCAGGCGGAAATCAA
TTGAAGCGGATACCACCCACCGTCGTCCATAGTCCGACGTCCACCACCCA
CCACCCAATTTTCCCACTCCTGTTTTCAGTTGTTTATGTGTGCGTGTGCG
TGCGTCCACTGTGGACGATGTTGAAACAGAAGCGTTTGGCGAAGCAGAAA
CCCAAAGCGAAACCGCACCAGCCGCGTAGTTGGATCGAGACAAATTTCCA
GAAGCGCGAGTGCATCAAATTCATACCATGCCCAAAGGACGATACAAAAT
GCTGCTGTGGCCAGGCCCAGATCACGCATCAGACGATACCTGGCATCGAG
AGTGGGTCGCCCGGAGACCTCTGGCTGCCCACCAAGCACACCCGCCCACA
GCCCACAGATGCCTATGGAACCATCGAGTTCCAGGGCGGCGCTCATCCCA
CAAAGGCACAGTACGTTCGCCTGTCGTTCGACACGCGGCCGGAACTACTG
GTGCAGCTATTCACCAAGGAATGGAATCTGGAATTGCCAAAACTTTTGAT
CACCGTGCAGGGCGGCAAGGCCAACTTTGATTTGCAGGCCAAGCTGAAAA
AGGAGATACGCAAAGGACTGCTGAAGGCGGCGAAGACCACTGGAGCCTGG
ATATTCACCGGCGGCACCAACACCGGCGTCACCAAGCAAGTGGGCGATGC
CCTGCTCCTGGAGGGTCAGCAGCGGACAGGACGAGTGGTCAGCATCGGCA
TCGCTCCCTGGGGCATCGTGGAGCGCAATCACGAGCTGCTGGGCCACAAC
CGCGAAGTGCCCTGCCACAGCATTAGTTCGCCCAGATCCAAATTGGCCGT
GCTGAACAATCGGCATGCGTACTTTCTGCTGGTCGACAATGGCACCCAGG
CCAAGTATGGCGCCGAATTGATCCTGCGGCGCAAACTGGAGAAATTCATA
TCCAACCTGAAGCTTCATCCATTCACACATTCCAGTACGCCCGTCGTCTG
CCTGGTGATCGAGGGCGGCACCAACACGATACGTGCGGTGCTCGAGTACG
TGACGGATTCGCCGCCGGTTCCGGTGGTCGTATGTGACGGATCCGGGCGT
GCCGCCGACCTGCTGGCCTTTGTCCACAAATATGCTTCGGATGGCGAGGA
GCAGCCGGTACTGGAGTCCATGCGGGACTATCTCATCGGGACCATACAGA
AGACCTTTGAAGTGGGACTGGACCAATCCGAGAAGCTCTACCAGGAGTTG
CTGCAGTGCACACGGAACAAGAATCTGATTACCGTCTTTCGCATACAGGA
AAAGCCCGAGGGCGAGGCGCAGGAACTGGATCAGACCATCCTAACGGCCC
TCTTCAAGTCACAGCATCTAAGTCCGCCGGAGCAATTGAGTCTCGCCCTG
ACGTGGAATCGGGTGGACATAGCGCGCAGTGAGATATTCGTCTACGGGCA
GGAATGGCCAAATGGCGCCCTGGACGAGGCCATGATGCAGGCGCTGGAGC
ACGATAGAATCGATTTTGTCAAATTACTCCTGGAGAATGGCGTTTCGATG
AAGAAATTTTTGACAATACCGCGCCTCGAGGAGCTCTACAATACCAAACA
CGGTCCGGCCAACACGCTGGGCTACATCCTGCGCGATGTCCGACCGCACA
TACCCAAGGGCTACATTTACACGCTCCACGACATCGGCTTGGTGATCAAT
AAACTAATGGGCGGCGCATATCGATCCTATTACACGCGCCGCAAATTCCG
ACCCATCTACGCCAAGGTTATGAACAGCTATGCAAATGCCTGCCGCAAGT
CGTCGACCTACCAATACCAGCGATATGCCGGAGCCAATTCACTGAGCCTG
GTCACCGGTCTGCTGCCCTTCACCTCGGAAATGGCCCTCTTCGAGTTTCC
CTTCAACGAGTTGCTGATTTGGGCCGTGCTGACCAAGCGACAGCAGATGG
CGCTGCTGATGTGGACACATGGCGAGGAGGCATTGGCCAAATCACTCGTA
TCCTGCAAACTGTACAAGGCCATGGCACACGAAGCGGCCGAGGACGACTT
GGACACGGAAATCTACGAGGAGTTACGCTCCTACGCCAAGGAGTTCGAGA
GCAAAGGCAACAAGCTGCTGGACTTTAGTTACCGTCAGGATGCGGAGAAG
GCGCAAAGACTGCTAACCTGTGAGCTACACTCCTGGTCAAATCAGAGTTG
CCTTTCTCTGGCTGTGGCGGCCAACCATCGTGCCCTCCTCGCTCATCCCT
GTAGTCAGGTTATCCTGGCGGATCTGTGGATGGGTGGACTGCGAACCCGC
AAGAATACCAACTTCAAGGTCATTTTGGGTTTGGCGATGCCATTCTACAT
CAGGCAGCTTGACTTCAAGTCGAAGGAGGAGTTGCAACAGATGCCGCAGA
CTGAGGAAGAGCATCTGGAAAACCAGAACCTGGACAATGATGACTCGGAT
CGTTCGCAGCCGGATGCCGAGGCTCTATTGGCGGATACTTACTCAGTGCG
CGATACAAAAGTACACGAAAATGGCAAAGTCTCACTCACCGACTCAGATA
CCGCCCAATTCAGAGAGTTCTTCAATCTTTCCGAGTACAATGAGGTGAAA
CAGCACCAGCCGCTGCGTCTGAAAAAGAAGTTCTACGAGTTTTACACGGC
ACCCATAACCAAGTTCTGGGCGGATTCGATTGCCTATATGTTCTTTCTTA
TAATGTTCTCTTTCACTGTGCTGGTGAAGATGGAACAGATGCCGCGGTGG
CAGGAGTGGTATTCAATAGCATATATCACAACGCTGGGCTTCGAAAAGGT
GCGCGAAATAATATCCTCCGAACCGGTGGCCATTACGCATAAATTCTCGG
TGTGGGCGTGGAATATGTGGAATCCGTGCGACGGAGCCGCCATTATACTC
TTTGTCATCGGTTTGGCATTTCGATTCCGGGAGAATACGATGGACATTGG
ACGAGTCATTTACTGTGTGGACAGCATATACTGGTACCTGCGTATCCTGA
ACATCCTTGGCGTGAATAAATACCTGGGACCTCTGGTCACTATGATGGGC
AAAATGGTGAAAAACATGATATACTTTGTGGTTCTCTTGGCTGTCGTTTT
GATGAGTTTTGGTGTCAGCAGACAAGCGATTCTCTACCCCAACAAACAGC
CGACGTGGAGTCTCATCAAGGAGGTCACCTTCCAGCCCTACTTCATGCTG
TACGGAGAGGTGTTCGCCGGCGATATCGACCCTCCCTGCGGCGAGGATCC
CAGCCAGCCGGGCTGCGTCACTGGCCATTGGGTAACGCCGATAACCATGT
CCATGTACCTCTTGATTGCCAATATTCTGCTGATAAATCTGCTCATCGCT
GTGTTCAACAATATCTTCAACGAGGTCAACTCGGTTTCGCATCAGGTGTG
GATGTTCCAGCGGTTTACCGTAGTGATGGAGTACCAGCAGAAGCCTGTCC
TGCCGCCGCCTTTCATCGCGCTGTGCCACTTCTACTCCCTGCTCAAGTAC
TGTGTGCGGAAGGCGAAAGGATTGGAGGTGCAGCGGGACAATGGTCTCAA
ACTGTTCCTGGAGAAGGACGACCTGGAACGGCTGTACGACTTTGAGGAGG
AGTGCGTCGAGGGATTCTTCCACGAACAGGAAATCATCCTCAATCAGTCG
ACGGACGAGCGGGTTAAAAACACCACAGAGCGAGTGGAGACCATGTCTCA
GAAAATCGAGGACATCAATCAGAAGGAAAACATACAAACGGCCACCGTTC
AGAACATCGAGTTCCGATTGCGAAAGATGGAGGAATCCTCGGAGCAGATA
CTCTCACATTTGGCCGTCATACATCGTTTCATGTCGACACACACGGCTGG
TGCGGATGATTTGCGCGGTTCGACGATAAACATTCCGGGAGAGATGCAGC
GCATGCGCACCATCTCGATTTCGGACACCGAGGGCGGCAGCGGACCAGGC
GGAAATGGAGGAGGCGGTGGTGGTGGTGGAGCCATCGTTCCACTTGGTCT
GGGTGCTGGTCTGAATTTGAATTCGCTCCAGGTCACAACCCGGCGCCGCT
TTAATCGTTCGCTTACCGAGGTCCGGCCTGATGCCTACATCTTCGACGAG
GGCACGCACTTTGAGGTGGTACCTCTGCCGGAGGAACCGGACGAAGTGGT
CAAGTCCCGTGAGGCCCTCAACGAGCAGGTGGTCCGCAAGGCGTCGATGC
AGTCGGAGGCAGACTCGGACATCTACATTCCCGTGTCGCAGCGTCCATCG
ACTTGTGAGACGGTGAAGCGGACTCCGTACGTGACGGTGCGCCAGGATAC
GGGTGCCAGCACGGAGAGCAAGGACACCCTTACGCCCATGGGCAACAACG
ATGACGACCAGACGCTCGTGGGAGGCGACAACTCAGATGACGCGACGCCT
GACATCAACTTTGAGGCTGCCAGACATCGAGCACTGCGACAGCGCACGGT
ATCTCTATGCCGCCGCAACTCGGAAACGTACTCCTTAACCGGGGCGGACA
TAAACCGGTCACACATCAGCCTCAACCAGCTTGCCTCGTTGTCCCGCCGC
CAGATGAGCCTCACGCAATCCGAACCGGACAGCGACAAAGATGCGCCAAT
AGCCCAGGGTTCTGCACATCCGGGTAAATCAGTATTGCATGCGAAACCCT
CCAGAAATATCTTGCTGAAACTGCACAGCGAGTACACTTCGATTACGGAC
GAGCTGGAGAGCGTCTGCCACATGATAGCATCGCCTACGGTATCCCTGCC
AAGTAATAAAGCATCTTTGGACCGCCCCAAAACCGAAATGTCGCGGGCTG
AGGCTGCGGCCTTGCTGGAAAAGAAGCATCTAAAGGAGTGCGAAGAGAAC
GACTATATGATTCTGGAGGGACTGATCGAGTCCCGCGGCTCAATCGATGC
CAGCGCCCAGGGATTCGAGATTGGTGTATCCATAGACTACAGCCATCGCT
ACCCGCTGCGCCGAGAGACCGCCGTGGAGCTGTCACCTTCGAAGCCTTCG
GTAGATGGTGACCTGATGGGCGGTGGGGAAGGTGGCGGCGCCGGCGGAGG
CGATAGTAGCGATACCAGCGGGGCCGGTAGCTGCGGTGCCATGGTCGGTA
TCTCAAGTGGCTTCCAGTTAAAGAACGAGCGTCCCTGGCAGCGTAACTCC
TCGATGGAGCAGCAAACGTATCCCTCACCGTTGGTGCCAACACGGGCCAC
CAGTGACTTCCTCAATCCGCCGTATGAGGGCCGGCTGTTCAAGAAGTCCA
GTGAGAGCCTACAGAAAAACTCAAGCACGGAGACGGACTACTCGGCGCAT
CCGTACCGATTCATTAAGCAGAGCTCCAACGAGACGAACACTTCACTGAC
GGGCTCTTATAATGTGGACACTCCCTCGCTGACGGCGGAGCCCTCGTTGG
ACGCTGGCGACTCGCATTCGGCGACGGGAATAAGCATCAGCGTTGGCGCT
GTGGGCGGCACTGCCACGGCGCGTTACCAGCCCATCCGTACCGCCTCGGT
AGGCGCTGCCGATGGTAGGCGTTTGCGGGAGGAGAGCTCTAGTTCGCTGG
ATCTTAGCTCCTCGGGGCCAGTGACGATGCAGGCAGCGCCGGCACCGCCA
GTGCGTCCGATGCTGCTAAAGAAACAGTTTAGCGTGGACCAGGGTAAGCC
GTCTCAGACGGCCGCCGAGGCAGTGCCTCAGACACCGGAGGCGGCCCAGG
CTGGTCAGGCCAAACTGATTTCCACGCTCAAGCCGCAGCCCTTTGCGAGC
AAGTTGGGCATGAATGTGCTGAAGGAGAGCAGCTCTAGCACGGATGAGTC
CGTCGGTTCGTCAGCCAAAAGTAGCAACCCGGCGCTATCCATACCCCAGA
TCAGCACCCACCTGGTGCAGGACGAGATCGCCAAACTATCGTCGAACATC
AAGAGCAGCACCGAATCGGAAAAGGATCCGCCGTTTAACGAGACAATGTG
TTAGCAAAGTGGAAGGCCGACGAAAATGGATCGTGTGTGTCCCACACTGT
GCTCAATGGGAAAACTAGTCATAAGAGTGGGGTGATAAATAAGTTGTTGA
ACTAGCGTTGGGATCTAGGAAACATATATCAGAGATTATGCATATTTATT
CGAGGGGTTGGCAGTTAAGTACGTGTTAATGATTTTGACAATACATAGTT
CACAAATTCTCTGTATTTTTATACAAGTATTTATTTAGAAAGCCTCATTG
TTGTTGTACACTATTAAGGCAGAAGCATAGAATATGTGTTTTTGTTTAAT
GTCAATACCACCAAAAATATGCATATTGAAGCGCCTGAGTTATGCGATGC
ACATATTCACATACTCGGTACTTTTACAAACTCCTAGATGTAGTCAGCCA
TACATATTGCAACGTTGCAAGCAACTTTCACACAGACATATCTTAAAGCA
ACCACTCTACTTTATCCAATCCTATAATGAGCACTTACCTCAGCTCAATT
AGAAACCTATCGCAGCTCAATGTACTTTATGCCTGTCCCTGTCGGAGTTC
CGTATTGTAGTCTACGAGGTTCACTACGATATAAGCTTCTTGGCAATGTG
TGTATTATTATATGTGTATAACGTCTTCTTAGATAGTGAATTTTACTTGC
TTATAAGGGGGAAATTCGTGTGCAACTGTCTTTTTCGGCGGCATAGATAT
TAGTGTACATAAATAGACTAAATGTTATAGGTATGTTTAAAGATTGCTAA
AATTGTTCATGTTTGGCCAATGTGTGCTAGTAACTTAAATTAGATTTTTA
AATATTTTCAAGGATTAAGAATAACAATGCATTTTAATAAAATATTTATG
ATTGTACTTATTTATGTTAAGAATTGTACGTTATTTTTATTGAAATAAAT
TATTAACACTTTAAAATTT
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0339074
7239
FBtr0339075
4880
FBtr0339076
7028
FBtr0339077
7114
FBtr0339078
7253
FBtr0339080
7700
FBtr0339081
7638
FBtr0339082
6833
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0308225
1928
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0308220
1939
FBpp0308221
1131
FBpp0308222
1921
FBpp0308223
2023
FBpp0308224
1996
FBpp0308226
1968
FBpp0308227
1953
FBpp0308228
1856
 
hide Comments
  • Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).
  • Transcript terminates at site supported by polyadenylated cDNA.
hide External Crossreferences
hide Synonyms
CG44240-RG
 
trpm-RG
 
hide References ( 0 )
No references are recorded in FlyBase at present.