FB2014_06, released November 12th, 2014
 
 

A Database of Drosophila Genes & Genomes

Archived data files for recent releases

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  • 2014 July (FB2014_04 Dmel Release 6.01)
  • 2014 March (FB2014_02 Dmel Release 5.56)
  • 2014 January (FB2014_01 Dmel Release 5.55)
  • 2013 November (FB2013_06 Dmel Release 5.54)
  • 2013 September (FB2013_05 Dmel Release 5.53)
  • 2013 July (FB2013_04 Dmel Release 5.52)
  • 2013 May (FB2013_03 Dmel Release 5.51)
  • 2013 March (FB2013_02 Dmel Release 5.50)
  • 2013 January (FB2013_01 Dmel Release 5.49)
  • 2012 September (FB2012_05 Dmel Release 5.47)
  • 2012 July (FB2012_04 Dmel Release 5.46)
  • 2012 May (FB2012_03 Dmel Release 5.45)
  • 2012 March (FB2012_02 Dmel Release 5.44)
  • 2012 January (FB2012_01 Dmel Release 5.43)
  • 2011 November (FB2011_10 Dmel Release 5.42)
  • 2011 October (FB2011_09 Dmel Release 5.41)
  • 2011 September (FB2011_08 Dmel Release 5.40)
  • 2011 July (FB2011_07 Dmel Release 5.39)
  • 2011 June (FB2011_06 Dmel Release 5.38)
  • 2011 May (FB2011_05 Dmel Release 5.37)
  • 2011 April (FB2011_04 Dmel Release 5.36)
  • 2011 March (FB2011_03 Dmel Release 5.35)
  • 2011 February (FB2011_02 Dmel Release 5.34)
  • 2011 January (FB2011_01 Dmel Release 5.33)
  • 2010 November (FB2010_09 Dmel Release 5.32)
  • 2010 October (FB2010_08 Dmel Release 5.31)
  • 2010 June (FB2010_06 Dmel Release 5.29)
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  • 2010 April (FB2010_04 Dmel Release 5.27)
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  • 2010 February (FB2010_02 Dmel Release 5.25)
  • 2010 January (FB2010_01 Dmel Release 5.24)
  • 2009 November (FB2009_10 Dmel Release 5.23)
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  • 2009 July (FB2009_06 Dmel Release 5.19)
  • 2009 May (FB2009_05 Dmel Release 5.18)
  • 2009 April (FB2009_04 Dmel Release 5.17)
  • 2009 March (FB2009_03 Dmel Release 5.16)
  • 2009 February (FB2009_02 Dmel Release 5.15)
  • 2009 January (FB2009_01 Dmel Release 5.14)
  • 2008 November (FB2008_10 Dmel Release 5.13)
  • 2008 September (FB2008_08 Dmel Release 5.11)
  • 2008 July (FB2008_06 Dmel Release 5.9)
  • 2008 May (FB2008_05 Dmel Release 5.8)
  • 2008 April (FB2008_04 Dmel Release 5.7)
  • 2008 March (FB2008_03 Dmel Release 5.6)
  • 2008 February (FB2008_02 Dmel Release 5.5)
  • 2008 January (FB2008_01 Dmel Release 5.5)
  • 2007 November (FB2007_03 Dmel Release 5.4)
  • 2007 September (FB2007_02 Dmel Release 5.3)
  • 2006 December (FB2006_01 Dmel Release 5.1)
  • 2005 July (Dmel Release 4.1)
  • 2005 April (Dmel Release 4.1)
  • 2004 August (Dmel Release 3.2.1)
  • 2004 February (Dmel Release 3.2.0)
  • 2003 December (Dmel Release 3.1)
  • 2003 October (Dmel Release 3.1)
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Postgres Chado Database Dumps
  • FTP releases archive (ftp://ftp.flybase.net/releases/)
  • FB2014_05 (ftp://ftp.flybase.net/releases/FB2014_05/psql)
  • FB2014_04 (ftp://ftp.flybase.net/releases/FB2014_04/psql)
  • FB2014_03 (ftp://ftp.flybase.net/releases/FB2014_03/psql)
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  • FB2014_01 (ftp://ftp.flybase.net/releases/FB2014_01/psql)
  • FB2013_06 (ftp://ftp.flybase.net/releases/FB2013_06/psql)
Sequence Data & XML Files
hide Synonyms
Item
Chado XML
Reporting XML
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FB2014_05 Synonyms
FB2014_04 Synonyms
FB2014_03 Synonyms
FB2014_02 Synonyms
FB2014_01 Synonyms
FB2013_06 Synonyms
hide Genes
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Item
Chado XML
Reporting XML
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Genes data
RNA-Seq RPKM values
Physical Interaction table
FBgn ⇔ DB Accession IDs
FBgn ⇔ Annotation ID
FBgn ⇔ GLEANR IDs
FBgn ⇔ FBtr ⇔ FBpp IDs
FBgn Exons ⇔ Affy1
FBgn Exons ⇔ Affy2
Genes GO data
Genes map table
Gene summaries
Unique Protein Isoforms
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Item
Chado XML
Reporting XML
Other
RNA-Seq RPKM values
Physical Interaction table
FBgn ⇔ DB Accession IDs
FBgn ⇔ Annotation ID
FBgn ⇔ GLEANR IDs
FBgn ⇔ FBtr ⇔ FBpp IDs
FBgn Exons ⇔ Affy1
FBgn Exons ⇔ Affy2
Genes GO data
Gene summaries
Unique Protein Isoforms
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Item
Chado XML
Reporting XML
Other
RNA-Seq RPKM values
Physical Interaction table
FBgn ⇔ DB Accession IDs
FBgn ⇔ Annotation ID
FBgn ⇔ GLEANR IDs
FBgn ⇔ FBtr ⇔ FBpp IDs
FBgn Exons ⇔ Affy1
FBgn Exons ⇔ Affy2
Genes GO data
Gene summaries
Unique Protein Isoforms
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Item
Chado XML
Reporting XML
Other
Genes data
RNA-Seq RPKM values
Physical Interaction table
FBgn ⇔ DB Accession IDs
FBgn ⇔ Annotation ID
FBgn ⇔ GLEANR IDs
FBgn ⇔ FBtr ⇔ FBpp IDs
FBgn Exons ⇔ Affy1
FBgn Exons ⇔ Affy2
Genes GO data
Genes map table
Gene summaries
Unique Protein Isoforms
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Item
Chado XML
Reporting XML
Other
Genes data
RNA-Seq RPKM values
Physical Interaction table
FBgn ⇔ DB Accession IDs
FBgn ⇔ Annotation ID
FBgn ⇔ GLEANR IDs
FBgn ⇔ FBtr ⇔ FBpp IDs
FBgn Exons ⇔ Affy1
FBgn Exons ⇔ Affy2
Genes GO data
Genes map table
Gene summaries
Unique Protein Isoforms
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Item
Chado XML
Reporting XML
Other
Genes data
RNA-Seq RPKM values
Physical Interaction table
FBgn ⇔ DB Accession IDs
FBgn ⇔ Annotation ID
FBgn ⇔ GLEANR IDs
FBgn ⇔ FBtr ⇔ FBpp IDs
FBgn Exons ⇔ Affy1
FBgn Exons ⇔ Affy2
Genes GO data
Genes map table
Gene summaries
Unique Protein Isoforms
hide Alleles and Stocks
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Item
Chado XML
Reporting XML
Other
Allele data
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Item
Chado XML
Reporting XML
Other
Allele data
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Item
Chado XML
Reporting XML
Other
Allele data
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Item
Chado XML
Reporting XML
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Allele data
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Item
Chado XML
Reporting XML
Other
Allele data
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Item
Chado XML
Reporting XML
Other
Allele data
hide Human Disease
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Item
Chado XML
Reporting XML
Other
Human disease model data
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Item
Chado XML
Reporting XML
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Human disease model data
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Item
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Human disease model data
hide Nomenclature
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FB2014_05 list
FB2014_04 list
FB2014_03 list
FB2014_02 list
FB2014_01 list
FB2013_06 list
hide Ontology Terms
hide Frozen Files used for the FB2014_05 release of FlyBase
Item
Chado XML
Reporting XML
Other
FBbt: (fly_anatomy)
FBdv: (fly_development)
FBcv: (controlled vocab)
FBsv: (stock ontology)
GO: (gene ontology)
FBbi: (image ontology)
 
SO: (sequence ontology)
 
DO: (human disease ontology)
hide Frozen Files used for the FB2014_04 release of FlyBase
Item
Chado XML
Reporting XML
Other
FBbt: (fly_anatomy)
FBdv: (fly_development)
FBcv: (controlled vocab)
FBsv: (stock ontology)
GO: (gene ontology)
FBbi: (image ontology)
 
SO: (sequence ontology)
 
DO: (human disease ontology)
hide Frozen Files used for the FB2014_03 release of FlyBase
Item
Chado XML
Reporting XML
Other
FBbt: (fly_anatomy)
FBdv: (fly_development)
FBcv: (controlled vocab)
FBsv: (stock ontology)
GO: (gene ontology)
FBbi: (image ontology)
 
SO: (sequence ontology)
 
DO: (human disease ontology)
hide Frozen Files used for the FB2014_02 release of FlyBase
Item
Chado XML
Reporting XML
Other
FBbt: (fly_anatomy)
FBdv: (fly_development)
FBcv: (controlled vocab)
FBsv: (stock ontology)
GO: (gene ontology)
FBbi: (image ontology)
 
SO: (sequence ontology)
 
hide Frozen Files used for the FB2014_01 release of FlyBase
Item
Chado XML
Reporting XML
Other
FBbt: (fly_anatomy)
FBdv: (fly_development)
FBcv: (controlled vocab)
FBsv: (stock ontology)
GO: (gene ontology)
FBbi: (image ontology)
 
SO: (sequence ontology)
 
hide Frozen Files used for the FB2013_06 release of FlyBase
Item
Chado XML
Reporting XML
Other
FBbt: (fly_anatomy)
FBdv: (fly_development)
FBcv: (controlled vocab)
FBsv: (stock ontology)
GO: (gene ontology)
FBbi: (image ontology)
 
SO: (sequence ontology)
 
hide Genomes: Annotation and Sequence
All Sequenced Drosophila Species
hide Transcripts and Polypeptides
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Item
Chado XML
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Other
Transcript data
Polypeptide data
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Item
Chado XML
Reporting XML
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Transcript data
Polypeptide data
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Item
Chado XML
Reporting XML
Other
Transcript data
Polypeptide data
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Item
Chado XML
Reporting XML
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Transcript data
Polypeptide data
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Item
Chado XML
Reporting XML
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Transcript data
Polypeptide data
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Item
Chado XML
Reporting XML
Other
Transcript data
Polypeptide data
hide Transposons, Transgenic Constructs, and Insertions
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Item
Chado XML
Reporting XML
Other
Insertions
Transgenic constructs
Transgenic construct maps
Map data for insertions
Transposable elements (canonical set)
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Item
Chado XML
Reporting XML
Other
Insertions
Transgenic constructs
Transgenic construct maps
Map data for insertions
Transposable elements (canonical set)
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Item
Chado XML
Reporting XML
Other
Insertions
Transgenic constructs
Transgenic construct maps
Map data for insertions
Transposable elements (canonical set)
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Item
Chado XML
Reporting XML
Other
Insertions
Transgenic constructs
Transgenic construct maps
Map data for insertions
Transposable elements (canonical set)
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Item
Chado XML
Reporting XML
Other
Insertions
Transgenic constructs
Transgenic construct maps
Map data for insertions
Transposable elements (canonical set)
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Item
Chado XML
Reporting XML
Other
Insertions
Transgenic constructs
Transgenic construct maps
Map data for insertions
Transposable elements (canonical set)
hide Aberrations
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Item
Chado XML
Reporting XML
Other
Aberration data
Balancer data
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Item
Chado XML
Reporting XML
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Aberration data
Balancer data
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Item
Chado XML
Reporting XML
Other
Balancer data
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Item
Chado XML
Reporting XML
Other
Balancer data
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Item
Chado XML
Reporting XML
Other
Balancer data
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Item
Chado XML
Reporting XML
Other
Balancer data
hide Large Dataset Metadata
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Item
Chado XML
Reporting XML
Other
Dataset metadata members
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Item
Chado XML
Reporting XML
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Dataset metadata members
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Item
Chado XML
Reporting XML
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Dataset metadata members
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Item
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Dataset metadata members
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Item
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Dataset metadata members
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Item
Chado XML
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Dataset metadata members
hide Clones
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Item
Chado XML
Reporting XML
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Clone data
cDNAs: FBcl ⇔ acc. ID
Genomic: FBcl ⇔ acc. ID
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Item
Chado XML
Reporting XML
Other
Clone data
cDNAs: FBcl ⇔ acc. ID
Genomic: FBcl ⇔ acc. ID
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Item
Chado XML
Reporting XML
Other
Clone data
cDNAs: FBcl ⇔ acc. ID
Genomic: FBcl ⇔ acc. ID
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Item
Chado XML
Reporting XML
Other
Clone data
cDNAs: FBcl ⇔ acc. ID
Genomic: FBcl ⇔ acc. ID
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Item
Chado XML
Reporting XML
Other
Clone data
cDNAs: FBcl ⇔ acc. ID
Genomic: FBcl ⇔ acc. ID
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Item
Chado XML
Reporting XML
Other
Clone data
cDNAs: FBcl ⇔ acc. ID
Genomic: FBcl ⇔ acc. ID
hide References
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Item
Chado XML
Reporting XML
Other
FB2014_05 reference data
FlyBase FBrf ⇔ PubMed ID
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Item
Chado XML
Reporting XML
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FB2014_04 reference data
FlyBase FBrf ⇔ PubMed ID
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Item
Chado XML
Reporting XML
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FB2014_03 reference data
FlyBase FBrf ⇔ PubMed ID
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Item
Chado XML
Reporting XML
Other
FB2014_02 reference data
FlyBase FBrf ⇔ PubMed ID
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Item
Chado XML
Reporting XML
Other
FB2014_01 reference data
FlyBase FBrf ⇔ PubMed ID
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Item
Chado XML
Reporting XML
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FB2013_06 reference data
FlyBase FBrf ⇔ PubMed ID
hide News
hide Map Conversion Tables
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Item
Chado XML
Reporting XML
Other
Cytological ⇔ Sequence
Cytological ⇔ Genetic
Cyto ⇔ Genetic ⇔ Seq
Genes map table
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Item
Chado XML
Reporting XML
Other
Cytological ⇔ Sequence
Cytological ⇔ Genetic
Cyto ⇔ Genetic ⇔ Seq
Genes map table
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Item
Chado XML
Reporting XML
Other
Cytological ⇔ Sequence
Cytological ⇔ Genetic
Cyto ⇔ Genetic ⇔ Seq
Genes map table
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Item
Chado XML
Reporting XML
Other
Cytological ⇔ Sequence
Cytological ⇔ Genetic
Cyto ⇔ Genetic ⇔ Seq
Genes map table
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Item
Chado XML
Reporting XML
Other
Cytological ⇔ Sequence
Cytological ⇔ Genetic
Cyto ⇔ Genetic ⇔ Seq
Genes map table
hide FB2013_06
Item
Chado XML
Reporting XML
Other
Cytological ⇔ Sequence
Cytological ⇔ Genetic
Cyto ⇔ Genetic ⇔ Seq
Genes map table