Try out the beta release of "FlyBase 2.0" at beta.flybase.org
FB2017_02, released April 18, 2017
 
 

A Database of Drosophila Genes & Genomes

RNA-Seq Signal By Region

Mapping Options

Supply the symbol or FBgn ID for one gene of interest, and choose to query either the developmental or tissue RNA-Seq profiles. The tool will retrieve the locations of all exons for the gene specified, and report the average RNA-Seq signal for each region. Alternatively, the tool also allows the input of one or more user-specified genomic regions using standard GBrowse coordinate nomenclature (e.g., 3L: 20000..21000); for multiple regions, enter one region/line in the input box.