Cytology	Observed or estimated sequence coordinates	Symbol	Stocks


*Genes (mapped to the sequence)* [Export into hitlist]
2F3-2F4	X:2271008..2275068	Grp170	6 stocks
2F4-2F4	X:2275822..2277781	Vml	3 stocks
2F4-2F5	X:2278031..2293411	CG2865	9 stocks
2F5-3A1,3A-3A,3A-3A,2F6-2F6,2F6-3A1,2F5-2F6,2F5-2F6,2F6-2F6	X:2295466..2343870	Raf	39 stocks

*Insertions (sequence mapped)* [Export into hitlist]
2F4-2F4	X:2275073..2275073	P{EPg}Grp170[HP10920]
2F4-2F4	X:2275073..2275073	P{EPgy2}Grp170[EY11751]	FBst0021079
2F4-2F4	X:2275091..2275091	P{GawB}NP5062	FBst0303696
2F4	X:2276302..2276302	P{EPgy2}Vml[EY21650]	FBst0024095
2F4	X:2277329..2277329	P{GSV2}GS51122
2F4-2F4	X:2280039..2280039	P{GawB}NP0711	FBst0302589
2F4	X:2280046..2280046	P{GSV2}GS51553
2F4-2F4	X:2280343..2280343	P{EP}CG2865[G11185]	FBst1023447
2F4-2F4	X:2287100..2287389	P{Mae-UAS.6.11}CG2865[GG01689]
2F4-2F4	X:2287661..2287661	P{GawB}CG2865[NP2743]	FBst0303175
2F4	X:2290819..2290819	Mi{MIC}CG2865[MI09761]	FBst0053398
2F4-2F4	X:2291611..2291611	P{GawB}CG2865[NP3421]	FBst0303361
2F2	X:2292907..2292907	P{GT1}CG2865[BG01555]	FBst0012646
2F5-2F5	X:2293102..2293587	P{GawB}NP7174	FBst0316840
2F5-2F5	X:2293342..2293342	P{GawB}NP7285	FBst0316923
2F5-2F5	X:2293384..2293384	P{GawB}NP0060	FBst0314766
2F5-2F5	X:2293423..2293423	P{XP}d07602
2F5-2F5	X:2293423..2293423	P{GawB}NP3334	FBst0315957
2F5-2F5	X:2293424..2293424	P{GawB}NP3052
2F5-2F5	X:2293431..2293530	P{GawB}NP3148	FBst0315860
2F5-2F5	X:2293444..2294245	P{lacW}G0226a
2F5-2F5	X:2293495..2294089	P{GawB}NP6085	FBst0316565
2F5-2F5	X:2293495..2293914	P{GawB}NP6067	FBst0316559
2F2-2F2	X:2293495..2293495	P{EP}EP1125[EP1125]	FBst0010960
2F5-2F5	X:2293496..2293712	P{GawB}NP6108	FBst0303989
2F5	X:2293502..2293502	P{XP}d07670
2F5_r5	X:2293509..2293509	P{GT1}BG02712
2F5-2F5	X:2293516..2293516	P{PTT-GB}CB03023
2F5-2F5	X:2293520..2293593	P{Mae-UAS.6.11}GG01147
2F2-2F2	X:2293560..2293560	P{EP}EP1606
2F5-2F5	X:2293608..2294154	P{GawB}NP0685	FBst0315025
2F5	X:2293923..2293923	P{GSV2}GS7435
2F5	X:2294590..2294590	P{XP}d00438
2F5-2F5	X:2294768..2294867	P{XP}d03964
2F5	X:2294775..2294775	P{XP}d06241
2F5,2F5-2F5	X:2294924..2294924	P{RS5}5-HA-2432
2F5-2F5	X:2295168..2295814	P{GawB}NP0978	FBst0302714
2F5	X:2295416..2295417	PBac{WH}f02392
2F5	X:2295416..2295416	PBac{RB}e01689
2F5	X:2295416..2295416	PBac{WH}f01215
2F2-2F2	X:2296132..2296132	P{EP}Raf[EP1431]	FBst0017225
2F5-2F5	X:2296135..2296426	P{Mae-UAS.6.11}GG01260
2F5	X:2296540..2296540	P{GSV7}GS20804
2F5	X:2297085..2297085	PBac{RB}e01649
2F5	X:2297436..2297436	P{XP}d01560
2F5-2F5	X:2297669..2297669	PBac{IT.GAL4}Raf[1019-G4]	FBst0063964
2F5	X:2298262..2298262	P{EPgy2}Raf[EY21662]
2F5	X:2298630..2298630	PBac{RB}e02392
2F5	X:2300134..2300134	PBac{PB}c02533
2F5	X:2300297..2300297	PBac{WH}f02338
2F5	X:2300408..2300408	P{GSV2}GS7462
2F5-2F5	X:2300937..2301076	P{GawB}NP3407	FBst0315995
2F5	X:2301064..2301064	P{XP}d06410
2F5-2F5	X:2301065..2301507	P{Mae-UAS.6.11}GG01662
2F5-2F5	X:2301120..2301120	P{GawB}NP0631	FBst0314998
2F5-2F5	X:2301129..2301419	P{GawB}NP2815	FBst0315787
2F5-2F5	X:2301572..2301572	P{GawB}NP5044	FBst0316282
2F5	X:2301575..2301575	P{GSV3}GS8160
2F2	X:2301718..2301718	P{GT1}Raf[BG02367]
2F5-2F5	X:2302256..2302256	P{GawB}NP3587	FBst0303414
2F5-2F5	X:2303458..2303949	P{GawB}NP4007	FBst0316112
2F5	X:2303846..2303846	P{XP}d08614
2F5	X:2303876..2303876	P{EPgy2}Raf[EY12379]
2F5-2F5	X:2303936..2303936	P{GawB}NP3608	FBst0303420
2F5	X:2304651..2304651	PBac{WH}f02314
2F5	X:2304654..2304654	PBac{RB}e03866
2F5	X:2305795..2305795	PBac{PB}c05599b
2F5-2F5	X:2305874..2306064	P{Mae-UAS.6.11}GG01490
2F5-2F5	X:2305984..2305984	P{GawB}NP7216	FBst0304256
2F5-2F5	X:2306039..2306039	P{GawB}NP0227	FBst0314838
2F5,2F5-2F5	X:2306171..2306171	P{RS5}5-HA-2171
2F5	X:2306192..2306192	P{GSV1}GS1087
2F2	X:2306364..2306364	P{GT1}Raf[BG02120]
2F5	X:2306382..2306382	P{XP}d00983
2F5-2F5	X:2307781..2308164	P{Mae-UAS.6.11}GG01070
2F2	X:2308649..2308649	P{EPgy2}Raf[EY02603]
2F5-2F5	X:2317382..2317616	P{Mae-UAS.6.11}GG01758
2F5	X:2317528..2317528	P{XP}d08816
2F5-2F5	X:2317609..2317609	P{Adh-lacZ.mut.Adh-lacZ.wt.loxP.FRT}X53
2F5	X:2317625..2317625	P{XP}d10727
2F5	X:2317631..2317631	P{RS3}CB-0780-3	FBst0325882
2F5	X:2317632..2317632	P{GSV2}GS51132
2F5	X:2317719..2317719	P{XP}d00426
2F3	X:2317781..2317781	P{GT1}Raf[BG01975]
2F5	X:2319013..2319013	PBac{WH}f01395
2F5	X:2319981..2319981	P{GSV7}GS20430

*Insertions (cytology mapped)* [Export into hitlist]
2-2	X:1368553..2328357	P{UAS-crb.wt}2a
2-2	X:1368553..2328357	P{UAS-crb.wt}1d
2B13--12B18	X:1860969..13757665	P{lacW}arm[G0268a]	FBst0314575
2F-2F	X:2223442..2328357	P{w[en.1]}15
2F-2F	X:2223442..2328357	P{lacZ}RD1937
2F-2F	X:2223442..2328357	P{w[en.1]}8
2F4-2F5	X:2271797..2321100	P{EP}EP1401
2F5-2F5	X:2292332..2321100	P{XP}d10154
2F5-2F5	X:2292332..2321100	P{XP}d08039
2F5-2F5	X:2292332..2321100	P{RS3r}CB-0780-3

*Deleted segments (sequence mapped)* [Export into hitlist]
3Lt--61A	X:1..2447769	Df(1)sc-J4	FBst0001546
2B14--2F5	X:1894112..2317631	Df(1)ED6565	4 stocks
2C7--2F5	X:2042227..2317631	Df(1)ED409	3 stocks
2E1--3A2	X:2184630..2387766	Df(1)ED6574	3 stocks
2F2--3A4	X:2251580..2545663	Df(1)BSC717	2 stocks
2F5--3A1	X:2319013..2334655	Df(1)Ilp6

*Deleted segments (cytology mapped)* [Export into hitlist]
1B2--3A3	X:427955..2490288	T(1;3)sc[J4]	FBst0305378
1F--4B	X:1254810..4333243	Df(1)cho6
2B4--3C1	X:1617223..2845022	Df(1)HE333
2B14--3C5	X:1876562..3039434	Df(1)w[35]
2C1--3C5	X:1972107..3039434	Df(1)w-vco
2C2--3E3	X:2010028..3677060	Df(1)z1
2C3--3E4	X:2019122..3691605	Df(1)w-N14a
2C5--3B3	X:2028580..2734254	Df(1)z3
2C5--3B1	X:2028580..2687099	Df(1)z4
2C8--3C3	X:2046043..2970807	Df(1)w-91l8
2C9--3B5	X:2065485..2777305	Df(1)278.4B-2a.a
2C9--3A2	X:2065485..2426642	Df(1)pn10
2C10--3C7	X:2071653..3143194	Df(1)N-264-79
2D--12B6	X:2083109..13754475	Df(1)w71b
2D2--3E8	X:2105194..3765077	Df(1)N-264-99
2D3--3C3	X:2127280..2970807	Df(1)w-85d2
2D3--2F5	X:2127280..2321100	Df(1)Pgd-kz	2 stocks
2D4--3E2	X:2138735..3675489	Df(1)N-264-38
2D4--3C4	X:2138735..2976541	Df(1)z2
2D5--2F5	X:2150191..2321100	Df(1)pn24
2D6--3C3	X:2161647..2970807	Df(1)w64c
2E--4B	X:2173103..4333243	Df(1)cho7
2E1--3C3	X:2173103..2970807	Df(1)w-89e16
2E1--3C2	X:2173103..2907914	Df(1)64c18	2 stocks
2E1--3A8	X:2173103..2644928	Df(1)pn7a
2E--3A3	X:2173103..2490288	Df(1)z-deb92
2E--3A3	X:2173103..2490288	Df(1)z-deb3
2E2--4C6	X:2195188..4530050	Df(1)235
2E2--4C6	X:2195188..4530050	Df(1)172
2E2--3C7	X:2195188..3143194	Df(1)24a
2E2--3C7	X:2195188..3143194	Df(1)247g
2E2--3C3	X:2195188..2970807	Df(1)w-89e24
2E2--3C1	X:2195188..2845022	Df(1)TEM1
2E2--3B4	X:2195188..2753185	Df(1)278.4B1
2E2--3A6	X:2195188..2606302	Df(1)TEM304
2E3--3C3	X:2217273..2970807	Df(1)TEM501
2F--3D5	X:2223442..3554314	Df(1)w-N-Ee4
2F--3C3	X:2223442..2970807	Df(1)w-Ee31
2F--3C2	X:2223442..2907914	Df(1)w-Ee30
2F--3C2	X:2223442..2907914	Df(1)w-Ee2
2F--3C2	X:2223442..2907914	Df(1)w-Ee1
2F1--3A10	X:2223442..2666234	Df(1)HM458
2F1--3A4	X:2223442..2555320	Df(1)2F1-3A4
2F2--3A6	X:2245527..2606302	Df(1)Sp2F-3A	FBst0006891
2F3--3C5	X:2266062..3039434	Df(1)JC19	2 stocks
2F4--3A9	X:2271797..2658571	Df(1)z-EM44
2F4--3A9	X:2271797..2658571	Df(1)z-EM45
2F4--3A9	X:2271797..2658571	Df(1)z-EM41
2F4--3A9	X:2271797..2658571	Df(1)z-EM46
2F4--3A9	X:2271797..2658571	Df(1)z-EM42
2F4--3A9	X:2271797..2658571	Df(1)z-EM43
2F5--3C3	X:2292332..2970807	Df(1)X10
2F5--3A3	X:2292332..2490288	Df(1)TEM6
2F5--3A2	X:2292332..2426642	Df(1)Exel6229

*Duplicated segments (sequence mapped)* [Export into hitlist]
2F1--2F5	X:2225780..2308517	Dp(1;3)DC403	FBst0030797
2F5--3A2	X:2295141..2375874	Dp(1;3)DC404	FBst0030798

*Duplicated segments (cytology mapped)* [Export into hitlist]
1A1--3E	X:103615..3765077	Dp(1;1)SM1
1A1--3C2	X:103615..2907914	Dp(1;4)20G1L
1A7--5C3	X:380430..5848081	Dp(1;1)L75.3
1A8--3A5	X:391845..2566926	Dp(1;1)M105.6
1B6--3C2	X:497486..2907914	Dp(1;1)GJ4
1E2--4B5	X:1077784..4300423	Dp(1;1)z1
1F1--3C3	X:1254810..2970807	Dp(1;2)w[m52b]
2B--3A	X:1475669..2666234	Dp(1;Y)y[2]sc	5 stocks
2B4--3A6	X:1617223..2606302	Dp(1;1)258-46
2B15--3C2	X:1901191..2907914	Dp(1;4)mg
2B16--3C1	X:1918431..2845022	Dp(1;1)z4
2B18--4B5	X:1967689..4300423	Dp(1;1)z8
2C1--3C5	X:1972107..3039434	Dp(1;3)w[vco]	5 stocks
2C10--4D4	X:2071653..4895794	Dp(1;1)z2
2D1--3D4	X:2083109..3511791	Dp(1;Y)w[+]303
2D1--3C7	X:2083109..3143194	Dp(1;Y)Bar[S]w[+]y[+]	4 stocks
2D2--3D3	X:2105194..3459456	Dp(1;2;Y)w[+]	39 stocks
2F5--3A5	X:2292332..2566926	Dp(1;1)z59d	FBst0300071