Tools
Tools Overview & Help
Query by symbols/IDs
Batch Download
Sequence Downloader
ID Validator
Feature Mapper
Search/Browse Portals
QuickSearch
Vocabularies
QueryBuilder
CytoSearch
Sequenced Species
Interactions Browser
ImageBrowse
Genomics Tools
BLAST
Fly BLAST @ Alliance
JBrowse
CytoSearch
Feature Mapper
Chromosome Maps
Synteny Table
Coordinates Converter
Sequence Downloader
modENCODE RNA-Seq
Overview
RNA-Seq Similarity
RNA-Seq Profile
RNA-Seq By Region
JBrowse
Submit Data
Fast-Track Your Paper
Submit Personal Communication
Feedback on Gene Snapshots
Downloads
Overview
Current Release
Archived Data
Map Conversion
Releases (FTP)
Links
External Resources
Model Organisms (MODs)
Alliance of Genome Resources
BeeBase
DictyBase
EcoCyc
Gramene
MGI
PomBase
Pseudobase
RGD
SGD
TAIR
VectorBase
WormBase
Xenbase
ZFIN
Stock Collections
Bloomington Drosophila Stock Center (BDSC)
FlyORF
Korea Drosophila Resource Center (KDRC)
Kyoto Stock Center
NIG-FLY
Tsinghua Fly Center (THFC)
Vienna Drosophila Resource Center (VDRC)
BDGP
DGRC
DRSC/TRiP
DIS by issue
FlyBook
FlyExpress
Interactive Fly
Virtual Fly Brain
FlyCyc
Community
Fast-Track Your Paper
FlyBase Community
Advisory Group
Fly Lab List
Recent Papers With
Technical Advances
Gene Snapshots
FlyBase Forum
Newsletter
FlySlack Community
Mastodon
Bluesky
X (formerly Twitter)
Fly Board
NIH Funding
About
Release Notes
New In This Release
Release Schedule
FlyBase Positions
Citing FlyBase
FlyBase Licensing
FlyBase Consortium
FlyBase Publications
FlyBase Presentations
Grants Supporting FlyBase
Help
Contact FlyBase
FlyBase Wiki:
Help Index
Tool help
Report help
FlyBase FAQ
Info for Authors
Author guidelines
Citing FlyBase
Fast-Track Your Paper Help
Gene Snapshots
Personal communications
Linking to/from FlyBase
Nomenclature
Curation documentation
Controlled Vocabularies in FlyBase
Gene Model Annotation
Gene Ontology (GO) Annotation
Nontraditional alleles
Vectors & Constructs
New to Flies?
Video Tutorials
Programmatic Access
to FlyBase: APIs, etc.
Previous
Next
FB2025_05
,
released December 11, 2025
Sign In
Tools
Tools Overview & Help
Query by symbols/IDs
Batch Download
Sequence Downloader
ID Validator
Feature Mapper
Search/Browse Portals
QuickSearch
Vocabularies
QueryBuilder
CytoSearch
Sequenced Species
Interactions Browser
ImageBrowse
Genomics Tools
BLAST
Fly BLAST @ Alliance
JBrowse
CytoSearch
Feature Mapper
Chromosome Maps
Synteny Table
Coordinates Converter
Sequence Downloader
modENCODE RNA-Seq
Overview
RNA-Seq Similarity
RNA-Seq Profile
RNA-Seq By Region
JBrowse
Submit Data
Fast-Track Your Paper
Submit Personal Communication
Feedback on Gene Snapshots
Downloads
Overview
Current Release
Archived Data
Map Conversion
Releases (FTP)
Links
External Resources
Model Organisms (MODs)
Alliance of Genome Resources
BeeBase
DictyBase
EcoCyc
Gramene
MGI
PomBase
Pseudobase
RGD
SGD
TAIR
VectorBase
WormBase
Xenbase
ZFIN
Stock Collections
Bloomington Drosophila Stock Center (BDSC)
FlyORF
Korea Drosophila Resource Center (KDRC)
Kyoto Stock Center
NIG-FLY
Tsinghua Fly Center (THFC)
Vienna Drosophila Resource Center (VDRC)
BDGP
DGRC
DRSC/TRiP
DIS by issue
FlyBook
FlyExpress
Interactive Fly
Virtual Fly Brain
FlyCyc
Community
Fast-Track Your Paper
FlyBase Community
Advisory Group
Fly Lab List
Recent Papers With
Technical Advances
Gene Snapshots
FlyBase Forum
Newsletter
FlySlack Community
Mastodon
Bluesky
X (formerly Twitter)
Fly Board
NIH Funding
About
Release Notes
New In This Release
Release Schedule
FlyBase Positions
Citing FlyBase
FlyBase Licensing
FlyBase Consortium
FlyBase Publications
FlyBase Presentations
Grants Supporting FlyBase
Help
Contact FlyBase
FlyBase Wiki:
Help Index
Tool help
Report help
FlyBase FAQ
Info for Authors
Author guidelines
Citing FlyBase
Fast-Track Your Paper Help
Gene Snapshots
Personal communications
Linking to/from FlyBase
Nomenclature
Curation documentation
Controlled Vocabularies in FlyBase
Gene Model Annotation
Gene Ontology (GO) Annotation
Nontraditional alleles
Vectors & Constructs
New to Flies?
Video Tutorials
Programmatic Access
to FlyBase: APIs, etc.
Previous
Next
FB2025_05
,
released December 11, 2025
CytoSearch Query "5A1--5A5"
J2G
Search
Go
[Download results as a
TSV file
] [
Group by feature type
] [
Export ALL into hitlist
]
Cytology
Observed
or
estimated
sequence coordinates
Symbol
Stocks
Feature
type
Mapped
by
1-20
X:103615..23108331
l(1)EH275a
gene
cytology
1-20
X:103615..23108331
ms(1)10
gene
cytology
1-20
X:103615..23108331
l(1)M86.4
gene
cytology
1-20
X:103615..23108331
l(1)U3
gene
cytology
1-20
X:103615..23108331
mei-99
FBst0004882
gene
cytology
1-20
X:103615..23108331
dh
FBst0001539
gene
cytology
1-20
X:103615..23108331
l(1)L25.7
gene
cytology
1-20
X:103615..23108331
l(1)M76.3
gene
cytology
1-20
X:103615..23108331
l(1)K84.3
gene
cytology
1-20
X:103615..23108331
l(1)Uc-1
gene
cytology
1-20
X:103615..23108331
l(1)BP
gene
cytology
1-20
X:103615..23108331
l(1)M95.1
gene
cytology
1-20
X:103615..23108331
l(1)5-39-1
gene
cytology
1-20
X:103615..23108331
ms(1)66
gene
cytology
1-20
X:103615..23108331
ms(1)294
gene
cytology
1-20
X:103615..23108331
l(1)K87.2
gene
cytology
1-20
X:103615..23108331
mei-269
gene
cytology
1-20
X:103615..23108331
ms(1)12
gene
cytology
1-20
X:103615..23108331
l(1)VA624
gene
cytology
1-20
X:103615..23108331
l(1)64
FBst0313556
gene
cytology
1-20
X:103615..23108331
c(1)a
gene
cytology
1-20
X:103615..23108331
l(1)14P11
gene
cytology
1-20
X:103615..23108331
mei-160
FBst0004878
gene
cytology
1A7--5C3
X:380430..5848081
Dp(1;1)L75.3
duplicated segment
cytology
1B1-5C2
X:408583..5832775
fs(1)M41
gene
cytology
2B13--12B18
X:1860969..13757665
P{lacW}arm[G0268a]
FBst0314575
insertion
cytology
2D--12B6
X:2083109..13754475
Df(1)w71b
deleted segment
cytology
3A--11E
X:2328358..13346259
Dp(1;1)SM2
duplicated segment
cytology
3A2--8C1
X:2354343..9003206
Dp(1;1)Gr
duplicated segment
cytology
3A10--12A8
X:2658572..13623898
Df(1)w70j
deleted segment
cytology
3B5--12A10
X:2753186..13646537
Df(1)w70e
deleted segment
cytology
3C--12B10
X:2804156..13757665
Df(1)LCD
deleted segment
cytology
3C1--6F6
X:2804156..7116431
Dp(1;1)Bt
duplicated segment
cytology
3C4--6A4
X:2970808..6516900
Dp(1;1)L73.7
duplicated segment
cytology
3C11--7B3
X:3255075..7557502
Dp(1;1)A10.3
duplicated segment
cytology
3E8--5A7
X:3751937..5613781
Df(1)HF366
deleted segment
cytology
3F3-5E8
X:3834116..6315088
l(1)TK128
gene
cytology
3F3-5E8
X:3834116..6315088
maz
gene
cytology
4B1--5A7
X:4115669..5613781
Df(1)rb30
deleted segment
cytology
4C12--8F10
X:4668106..9709556
Dp(1;1)J2.1
duplicated segment
cytology
4C15-5A4
X:4709426..5557013
l(1)4Da
gene
cytology
4E2--6F2
X:5027641..7071415
Dp(1;1)4E-6F
duplicated segment
cytology
4E3--5A2
X:5091242..5524812
Df(1)w64b
deleted segment
cytology
4E3--5A2
X:5091242..5524812
Dp(1;2)w[+]64b
2 stocks
duplicated segment
cytology
4F--5E
X:5107107..6315088
Dp(1;1)hdp-b7
duplicated segment
cytology
4F--5E
X:5107107..6315088
Dp(1;1)hdp-b6
duplicated segment
cytology
4F5--5A13
X:5313918..5694140
Df(1)BA2-8
FBst0307026
deleted segment
cytology
4F7-5A2
X:5352305..5524812
fs(1)MY18
gene
cytology
4F9--5D4
X:5384035..6097304
Dp(1;1)y[bl]
duplicated segment
cytology
4F10--5A2
X:5428543..5516611
Df(1)Exel6234
FBst0007708
deleted segment
sequence
4F10--5A2
X:5431451..5521263
Dp(1;3)DC138
FBst0030278
duplicated segment
sequence
4F11-5A1
X:5438064..5500314
TI{2A-lexA::GAD}SPR[2A-lexA]
FBst0084437
insertion
cytology
4F11-5A1
X:5438064..5500314
TI{2A-GAL4}SPR[PGF3]
insertion
cytology
4F11-5A1
X:5438064..5500314
TI{2A-EGFP}SPR[CCT1050C]
insertion
cytology
4F11-5A1
X:5438064..5500314
TI{2A-GAL4}SPR[2A-GAL4]
FBst0084692
insertion
cytology
4F11-5A1
X:5438064..5500314
TI{TI}SPR[attP]
FBst0084576
insertion
cytology
4F11-5A1
X:5438064..5500314
Mi{Trojan-lexA:QFAD.un}SPR[MI13553-TlexA:QFAD.un]
insertion
cytology
4F11-5A1
X:5446656..5494012
SPR
123 stocks
gene
sequence
5A--7A
X:5475817..7286017
Dp(1;2;1)AT
2 stocks
duplicated segment
cytology
5A1-5E8
X:5475817..6315088
l(1)air4
gene
cytology
5A-5B
X:5475817..5766002
l(1)5ABa
gene
cytology
5A-5A
X:5475817..5697152
P{enH+Hox.A}11A
insertion
cytology
5A;7A;17C;19F-5A;7A;17C;19F
X:5475817..5697152
Dp(1;1)hdp-b3
duplicated segment
cytology
5A-5A
X:5475817..5697152
P{Adh[w.PR]}#1
insertion
cytology
5A-5A
X:5475817..5697152
P{πM}5A
4 stocks
insertion
cytology
5A1-5A8
X:5475817..5634948
l(1)air6
gene
cytology
5A1-5A8
X:5475817..5634948
l(1)air5
gene
cytology
5A1-5A1
X:5484532..5484532
P{EP}SPR[G1258]
FBst1022764
insertion
sequence
5A1--5A5
X:5486534..5581014
Dp(1;3)DC139
FBst0030279
duplicated segment
sequence
5A1-5A1
X:5492668..5492668
P{EP}SPR[G887]
FBst1022711
insertion
sequence
5A1-5A1
X:5493014..5496052
frma
5 stocks
gene
sequence
5A1
X:5495998..5495998
Mi{MIC}frma[MI07193]
FBst0043608
insertion
sequence
5A1-5A2
X:5500208..5501229
CG32762
FBst0469841
gene
sequence
5A2-5A2
X:5501476..5502782
CG4151
3 stocks
gene
sequence
5A2
X:5503574..5503574
PBac{WH}f07387
insertion
sequence
5A2-5A2
X:5506509..5509148
lncRNA:CR45519
gene
sequence
5A2-5A2
X:5516608..5518771
CG12730
5 stocks
gene
sequence
5A2--5A6
X:5516611..5593966
Df(1)Exel6235
FBst0007709
deleted segment
sequence
5A2
X:5516611..5516611
P{XP}d00319
insertion
sequence
5A2
X:5516611..5516611
P{XP}d00314
insertion
sequence
5A2-5A2
X:5516760..5517192
P{Mae-UAS.6.11}GG01420
insertion
sequence
5A2-5A2
X:5516993..5517500
asRNA:CR45518
FBst1083581
gene
sequence
5A2,5A2-5A2
X:5517208..5517208
P{RS5}5-HA-2723
FBst0327669
insertion
sequence
5A2-5A2
X:5517472..5517688
P{Mae-UAS.6.11}CG12730[GG01188]
insertion
sequence
5A2
X:5518445..5518445
P{SUPor-P}CG12730[KG03180]
insertion
sequence
5A2
X:5518460..5518460
Mi{MIC}CG12730[MI01031]
FBst0034143
insertion
sequence
5A2
X:5519767..5519767
PBac{WH}f04458
insertion
sequence
5A2-5A2
X:5524302..5524465
snoRNA:Ψ28S-3342
FBst0043587
gene
sequence
5A2
X:5524331..5524331
Mi{MIC}snoRNA:Ψ28S-3342[MI06323]
FBst0043587
insertion
sequence
5A3-5A5,5A3-5A6
X:5528927..5560183
Vsx2
80 stocks
gene
sequence
5A4--5A8
X:5540150..5628038
Dp(1;3)DC140
FBst0030280
duplicated segment
sequence
5A4--5A10
X:5545559..5662787
Df(1)BSC571
FBst0025114
deleted segment
sequence
5A4
X:5545559..5545559
PBac{WH}Vsx2[f02921]
FBst0018598
insertion
sequence
5A4
X:5550049..5550283
PBac{WH}Vsx2[f04494]
insertion
sequence
5A5-5A9
X:5557014..5659446
l(1)G0384
FBst0314611
gene
cytology
5A5-5A5
X:5557014..5581511
P{GawB}MzVum
FBst0029031
insertion
cytology
5A5
X:5564315..5564315
P{XP}d01214
insertion
sequence