Cytology	Observed or estimated sequence coordinates	Symbol	Stocks	Feature type	Mapped by

81-100	3R:3461351..32068446	cant		gene	cytology
81-100	3R:3461351..32068446	l(3)cl-R3		gene	cytology
82A--85E	3R:4208470..9907978	Dp(3;3)Tpl-J25		duplicated segment	cytology
82B--84F	3R:4410636..8383247	Dp(3;3)Tpl-J4		duplicated segment	cytology
83B--85D	3R:5531603..9600373	Dp(3;3)D3		duplicated segment	cytology
83C--95C	3R:5688967..23940806	Dp(3;3)M37		duplicated segment	cytology
83C--86E	3R:5688967..11785612	Dp(3;3)Tpl-J1		duplicated segment	cytology
83C--85C	3R:5688967..9202520	Dp(3;3)Tpl-J23		duplicated segment	cytology
83C--84F	3R:5688967..8383247	Dp(3;3)Tpl-T21		duplicated segment	cytology
83E1--100D2	3R:6192284..31837725	Dp(3;Y)Tpl7		duplicated segment	cytology
83E1--99E	3R:6192284..30323585	Dp(3;Y)Tpl11		duplicated segment	cytology
84-85	3R:6625559..10201762	P{W5}84		insertion	cytology
84A--85A	3R:6625559..8767344	Dp(3;3)D1	FBst0305475	duplicated segment	cytology
84-84	3R:6625559..8383247	P{3.8S-Y}34		insertion	cytology
84D2--84F16	3R:7189302..8383247	Df(3R)D6		deleted segment	cytology
84D3--85B5	3R:7233763..8924290	Df(3R)dsx34		deleted segment	cytology
84D3--85A4	3R:7233763..8610003	Df(3R)D8		deleted segment	cytology
84D4--85D4	3R:7331517..9257806	Df(3R)p46		deleted segment	cytology
84D4--85C1	3R:7331517..9003892	Df(3R)p66		deleted segment	cytology
84D5--85F8	3R:7336076..10065507	Dp(3;3)Antp[73b-rv8]	FBst0305183	duplicated segment	cytology
84D6--85A6	3R:7398631..8703798	Df(3R)p4		deleted segment	cytology
84D6--85A3	3R:7398631..8584308	Df(3R)dsx1		deleted segment	cytology
84D8--85B5	3R:7467934..8924290	Df(3R)dsx37		deleted segment	cytology
84D8--85A2	3R:7467934..8527619	Df(3R)dsx11		deleted segment	cytology
84D9--85A3	3R:7488360..8584308	Df(3R)dsx27		deleted segment	cytology
84D10--85A3	3R:7552738..8584308	Df(3R)dsx33		deleted segment	cytology
84D10--85A2	3R:7552738..8527619	Df(3R)dsx8		deleted segment	cytology
84D11--85A3	3R:7617117..8584308	Df(3R)dsx10D		deleted segment	cytology
84D11--84F16	3R:7617117..8383247	Df(3R)dsx2D		deleted segment	cytology
84D13--85A5	3R:7710493..8703788	Df(3R)dsx28		deleted segment	cytology
84E--88A	3R:7760099..14226397	Dp(3;3)Y13		duplicated segment	cytology
84E1--84F12	3R:7760099..8334748	Df(3R)dsx5	FBst0001883	deleted segment	cytology
84E6--85A5	3R:7949952..8703788	Df(3R)V2		deleted segment	cytology
84E6--85A5	3R:7977774..8653134	Df(3R)ED5230		deleted segment	sequence
84E8--85B6	3R:7999376..8930218	Df(3R)p40	FBst0305261	deleted segment	cytology
84E9--85A11	3R:8028556..8767344	Df(3R)V8		deleted segment	cytology
84E12--85A11	3R:8098406..8767344	Df(3R)CA1		deleted segment	cytology
84F1--85B9	3R:8130322..8979804	Df(3R)p13		deleted segment	cytology
84F--85A11	3R:8130322..8767344	Df(3R)p118		deleted segment	cytology
84F1--85A11	3R:8130322..8767344	Df(3R)p-XT118		deleted segment	cytology
84F-84F	3R:8130322..8383247	P{lacW}S039605b		insertion	cytology
84F-84F	3R:8130322..8383247	P{lacW}S088712a		insertion	cytology
84F1-84F16	3R:8130322..8383247	sdl		gene	cytology
84F-84F	3R:8130322..8383247	l(3)S011028		gene	cytology
84F-84F	3R:8130322..8383247	P{ICon(dV)-v[+]3C}84F		insertion	cytology
84F-84F	3R:8130322..8383247	P{lacW}puc[S135108]		insertion	cytology
84F1-84F16	3R:8130322..8383247	P{PZ}sdl[02245]		insertion	cytology
84F1-84F16	3R:8130322..8383247	P{PZ}sdl[05090a]		insertion	cytology
84F-84F	3R:8130322..8383247	P{lacW}S058712a		insertion	cytology
84F-84F	3R:8130322..8383247	P{ICon(dV)-61C}84F		insertion	cytology
84F-84F	3R:8130322..8383247	l(3)ry87		gene	cytology
84F-84F	3R:8130322..8383247	P{ICon(dV)}84F		insertion	cytology
84F-84F	3R:8130322..8383247	P{lacW}S098513a		insertion	cytology
84F-84F	3R:8130322..8383247	P{lacW}l(3)S011028[S011028]		insertion	cytology
84F-84F	3R:8130322..8383247	P{418}T33.1.2		insertion	cytology
84F-84F	3R:8130322..8383247	l(3)ry78		gene	cytology
84F-84F	3R:8130322..8383247	P{ry1}R401		insertion	cytology
84F2--85A7	3R:8185946..8707125	Df(3R)CA3		deleted segment	cytology
84F4--85C6	3R:8213005..9106264	Df(3R)p21		deleted segment	cytology
84F6-84F13	3R:8246620..8336658	Dp(3;2)GV-CH321-23H11	FBst0090215	duplicated segment	sequence
84F6--84F13	3R:8250414..8340995	Df(3R)Exel6147	FBst0007626	deleted segment	sequence
84F6--85C3	3R:8250421..9056691	Df(3R)ED5296		deleted segment	sequence
84F8--85D5	3R:8284141..9258384	Df(3R)p30		deleted segment	cytology
84F8-84F14	3R:8284141..8355143	l(3)84Fj		gene	cytology
84F8-84F14	3R:8284141..8355143	l(3)84Fh		gene	cytology
84F11-84F12	3R:8319025..8333792	Poxm		gene	sequence
84F12--84F16	3R:8323959..8383247	P{lacW}l(3)S079101[S079101]		insertion	cytology
84F12-84F12	3R:8324316..8325036	CG7443		gene	sequence
84F12	3R:8331099..8331099	PBac{GAL4D,EYFP}Poxm[PL00489]	FBst0019523	insertion	sequence
84F12	3R:8333003..8333003	PBac{WH}Poxm[f05894]		insertion	sequence
84F12--85A2	3R:8333778..8477682	Df(3R)Exel6148	FBst0007627	deleted segment	sequence
84F12	3R:8333778..8333778	P{XP}d05123[d05123]	FBst0085443	insertion	sequence
84F13--84F16	3R:8334749..8383247	P{lacW}S096101a		insertion	cytology
84F13-84F16	3R:8334749..8383247	l(3)84Fk		gene	cytology
84F13-84F14	3R:8334749..8355143	l(3)84Fl		gene	cytology
84F13-84F14	3R:8334749..8355143	l(3)84Fm		gene	cytology
84F13--85A2	3R:8336366..8477683	Df(3R)BSC198	FBst0009624	deleted segment	sequence
84F13	3R:8336366..8336366	PBac{WH}f02841		insertion	sequence
84F13	3R:8339457..8339457	PBac{WH}f01705		insertion	sequence
84F13-84F13	3R:8339944..8341043	COX7A		gene	sequence
84F13_r5	3R:8340948..8340948	PBac{SAstopDsRed}LL01722	FBst0319149	insertion	sequence
84F13	3R:8340951..8340951	PBac{RB}COX7A[e03209]	FBst0018133	insertion	sequence
84F13	3R:8340995..8340995	P{XP}COX7A[d04921]	FBst0019210	insertion	sequence
84F13-84F13	3R:8341100..8341872	Arl2		gene	sequence
84F13	3R:8341101..8341101	PBac{WH}Arl2[f00424]	FBst0085607	insertion	sequence
84F13	3R:8341338..8341338	P{GSV6}Arl2[GS17851]	FBst0320680	insertion	sequence
84F13-84F13	3R:8341661..8343516	PNKP		gene	sequence
84F13	3R:8341847..8341847	PBac{WH}Arl2[f05690]		insertion	sequence
84F13	3R:8343450..8343472	PBac{5HPw[+]}PNKP[B167]	FBst0016158	insertion	sequence
84F13	3R:8343475..8343475	PBac{PB}PNKP[c06901]		insertion	sequence
84F13	3R:8343515..8343515	P{EP}G16252	FBst0032027	insertion	sequence
84F13-84F13	3R:8343669..8344310	COX7AL		gene	sequence
84F13-84F13	3R:8344400..8347465	DppIII		gene	sequence
84F13	3R:8344432..8344432	P{wHy}COX7AL[DG16603]		insertion	sequence
84F13-84F13	3R:8344433..8344657	P{GawB}DppIII[NP0598]	FBst0302536	insertion	sequence
84F13--85A5	3R:8347471..8669588	Df(3R)BSC248	FBst0023148	deleted segment	sequence
84F13	3R:8347471..8347492	PBac{WH}f06209		insertion	sequence
84F13	3R:8347471..8347471	PBac{WH}DppIII[f00363]	FBst0018319	insertion	sequence
84F13-84F13	3R:8347579..8349296	CG7352		gene	sequence
84F13	3R:8347700..8347700	Mi{ET1}CG7352[MB00667]	FBst0022865	insertion	sequence
84F13-84F13	3R:8348702..8348778	mir-9380		gene	sequence
84F13-84F14	3R:8349815..8352817	Atg13		gene	sequence
84F13-84F13	3R:8349841..8349841	P{PTT-GB}Atg13[CB05154]		insertion	sequence
84F13	3R:8349852..8349852	P{EP}Atg13[G6421]	FBst0030169	insertion	sequence
84F13	3R:8349853..8349853	P{GSV6}Atg13[GS11822]		insertion	sequence
84F13	3R:8349865..8349865	P{GSV7}PNKP[GS21535]	FBst0321469	insertion	sequence
84F14--85D27	3R:8351129..9600373	Df(3R)p-XT9		deleted segment	cytology
84F14	3R:8352226..8352226	Mi{MIC}Atg13[MI11954]	FBst0056700	insertion	sequence
84F14	3R:8354944..8354944	P{GSV2}GS51117		insertion	sequence
84F15-84F15	3R:8355144..8373130	TI{TI}Veneno[V5]	FBst0097116	insertion	cytology
84F15	3R:8356249..8356249	PBac{PB}c04120		insertion	sequence
84F15	3R:8356401..8356401	PBac{WH}f07659		insertion	sequence
84F15-84F15,85A1-85A3,85A1-85A3	3R:8356978..8359964	stck		gene	sequence
84F15	3R:8357487..8357487	PBac{RB}stck[e01454]		insertion	sequence
84F15	3R:8357583..8357583	PBac{WH}stck[f01146]		insertion	sequence
84F15-84F15	3R:8357859..8357859	P{EP}stck[G4023]	FBst1022943	insertion	sequence
84F15	3R:8357859..8357859	P{EPgy2}stck[EY06672]	FBst0016745	insertion	sequence
84F15	3R:8358272..8358272	P{GSV7}GS20634		insertion	sequence
84F15-84F15	3R:8359958..8362554	Veneno		gene	sequence
84F15	3R:8361040..8361040	Mi{MIC}Veneno[MI14417]	FBst0059699	insertion	sequence
84F15	3R:8362517..8362517	P{EPgy2}Veneno[EY21947]	FBst0022654	insertion	sequence
84F15	3R:8362553..8362553	P{EPgy2}EY11731	FBst0020820	insertion	sequence
84F15	3R:8362579..8362579	PBac{PB}c02412c	FBst0085027	insertion	sequence
84F15	3R:8362580..8362580	PBac{PB}Veneno[c04938]	FBst0017676	insertion	sequence
84F15	3R:8362580..8362580	PBac{PB}c04173		insertion	sequence
84F15	3R:8362580..8362580	PBac{PB}c03850		insertion	sequence
84F15-84F15	3R:8362826..8363894	CG7963		gene	sequence
84F15-85A2	3R:8364328..8477617	CG45263		gene	sequence
84F15	3R:8367625..8367625	Mi{MIC}CG45263[MI03227]	FBst0038555	insertion	sequence
84F15	3R:8369096..8369096	Mi{MIC}CG45263[MI02583]	FBst0036006	insertion	sequence
84F15	3R:8372023..8372023	Mi{MIC}CG45263[MI01889]	FBst0032796	insertion	sequence
84F16	3R:8379527..8379527	PBac{WH}CG45263[f05427]	FBst0018861	insertion	sequence
84F16	3R:8379568..8379568	Mi{MIC}CG45263[MI10361]	FBst0054539	insertion	sequence
85A-85B	3R:8383248..8979804	eth-as313		gene	cytology
85A-85B	3R:8383248..8979804	P{Jan/sry.CH8}814		insertion	cytology
85A-85B	3R:8383248..8979804	eth-aS307		gene	cytology
85A-85B	3R:8383248..8979804	s3754		gene	cytology
85A-85A	3R:8383248..8767344	P{lacW}S025807a		insertion	cytology
85A1--85A11	3R:8383248..8767344	Df(3R)p-bs12		deleted segment	cytology
85A-85A	3R:8383248..8767344	P{lacW}S028206a		insertion	cytology
85A-85A	3R:8383248..8767344	P-25		gene	cytology
85A-85A	3R:8383248..8767344	P{A92}A18		insertion	cytology
85A-85A	3R:8383248..8767344	P{hsneo}127		insertion	cytology
85A-85A	3R:8383248..8767344	SW140		gene	cytology
85A-85A	3R:8383248..8767344	P{ry1}R309		insertion	cytology
85A-85A	3R:8383248..8767344	P{lacW}l(3)S060914[S060914]		insertion	cytology
85A-85A	3R:8383248..8767344	P{DBF12-B.3'}85A		insertion	cytology
85A1--85A11	3R:8383248..8767344	Df(3R)p-bs13		deleted segment	cytology
85A-85A	3R:8383248..8767344	H{har1}M12		insertion	cytology
85A-85A	3R:8383248..8767344	P{Adh[w.PR]}#3		insertion	cytology
85A-85A	3R:8383248..8767344	P{ry1/3}R309.1		insertion	cytology
85A1-85A7	3R:8383248..8707125	l(3)85Ak		gene	cytology
85A1--85A6	3R:8383248..8703798	P{lacW}S077011a		insertion	cytology
85A1--85A5	3R:8383248..8703788	P{lacW}S097613a		insertion	cytology
85A1-85A5	3R:8383248..8703788	E(var)A1		gene	cytology
85A1	3R:8387803..8387803	Mi{MIC}CG45263[MI09920]	FBst0053423	insertion	sequence
85A1-85A1	3R:8413803..8414185	lncRNA:CR46126		gene	sequence
85A1	3R:8417657..8417657	Mi{MIC}CG45263[MI13044]	FBst0058673	insertion	sequence
85A1-85A1	3R:8419822..8420597	Obp85a		gene	sequence
85A1--85C1	3R:8420098..8952955	Df(3R)p-XT103	FBst0305391	deleted segment	sequence
85A1	3R:8431598..8431598	Mi{MIC}CG45263[MI06617]	FBst0042411	insertion	sequence
85A1	3R:8447535..8447535	Mi{MIC}CG45263[MI03026]	FBst0037778	insertion	sequence
85A1	3R:8457043..8457043	PBac{GAL4D,EYFP}CG45263[PL00036]	FBst0019362	insertion	sequence
85A1-85A1	3R:8460241..8461200	lncRNA:CR46125		gene	sequence
85A1	3R:8469159..8469159	Mi{MIC}CG45263[MI00162]	FBst0032043	insertion	sequence
85A1	3R:8469992..8469992	PBac{RB}CG45263[e00453]		insertion	sequence
85A1-85A3	3R:8470424..8553746	Dp(3;2)GV-CH321-05J10	FBst0090092	duplicated segment	sequence
85A2-85A3	3R:8470931..8584308	P{lacW}k05612b		insertion	cytology
85A2-85A2	3R:8470931..8527619	P{GSV6}GS10064		insertion	cytology
85A2-85A2	3R:8470931..8527619	P{GSV6}GS10956		insertion	cytology
85A2-85A2	3R:8470931..8527619	P{GSV2}GS50067		insertion	cytology
85A2-85A2	3R:8470931..8527619	P{GSV6}GS12277		insertion	cytology
85A2-85A2	3R:8470931..8527619	TI{2A-QF2}Or85b[2A-QF2]		insertion	cytology
85A2_r6-85A2_r6	3R:8470931..8527619	PBac{Tub-GAL80.G}III-85A2		insertion	cytology
85A2-85A2	3R:8470931..8527619	P{GSV7}GS23030		insertion	cytology
85A2	3R:8475341..8475341	PBac{y[+]-attP-3B}VK00032		insertion	sequence
85A1	3R:8477097..8477097	P{SUPor-P}CG45263[KG01644]	FBst0013463	insertion	sequence
85A2	3R:8477576..8477576	P{GSV6}GS12309		insertion	sequence
85A2-85A2	3R:8477582..8477681	P{GawB}NP5329	FBst0303814	insertion	sequence
85A2	3R:8477589..8477589	P{GSV6}GS13702		insertion	sequence
85A2--85A5	3R:8477619..8643015	Df(3R)BSC195	FBst0009621	deleted segment	sequence
85A2	3R:8477619..8477619	P{XP}d10426		insertion	sequence
85A2	3R:8477619..8477619	P{XP}d10135		insertion	sequence
85A2	3R:8477619..8477619	P{GSV6}GS12095		insertion	sequence
85A2	3R:8477619..8477619	P{wHy}CG45263[DG05503]		insertion	sequence
85A2	3R:8477619..8477619	P{GSV2}GS50632		insertion	sequence
85A2	3R:8477619..8477619	P{XP}d08923		insertion	sequence
85A2-85A2	3R:8477620..8477999	P{GawB}NP2362	FBst0315634	insertion	sequence
85A2	3R:8477626..8477626	P{EPgy2}EY08807	FBst0019760	insertion	sequence
85A2	3R:8477626..8477626	P{GSV6}GS10068		insertion	sequence
85A2,85A2-85A2	3R:8477626..8477626	P{RS3}CB-6880-3		insertion	sequence
85A2-85A2	3R:8477626..8477626	P{GawB}NP5392	FBst0316440	insertion	sequence
85A2	3R:8477632..8477632	P{GSV6}GS13142		insertion	sequence
85A2	3R:8477639..8477639	P{GSV6}GS13877		insertion	sequence
85A2-85A2	3R:8477655..8477655	P{GawB}NP0145	FBst0314802	insertion	sequence
85A2	3R:8477663..8477663	P{GSV1}CG45263[GS3056]		insertion	sequence
85A2	3R:8477676..8477676	P{GSV6}GS15736		insertion	sequence
85A2--85A5	3R:8477683..8669476	Df(3R)Exel6149	FBst0007628	deleted segment	sequence
85A2	3R:8477683..8477683	P{XP}d04754		insertion	sequence
85A2-85A2	3R:8477683..8477683	P{XP}d08646		insertion	sequence
85A2-85A2	3R:8477684..8477684	P{SX4.lexA::HG}ECPS18	FBst0604078	insertion	sequence
85A2-85A2	3R:8477684..8477684	P{SX4.lexA::HG}S24-2	FBst0604077	insertion	sequence
85A2	3R:8477692..8477692	P{GSV6}GS11422		insertion	sequence
85A2	3R:8477747..8477747	P{GSV6}GS12492		insertion	sequence
85A2	3R:8477750..8477750	P{GSV6}GS11619		insertion	sequence
85A2	3R:8477751..8477751	P{XP}d00407		insertion	sequence
85A2	3R:8477757..8477757	P{GSV7}GS22323		insertion	sequence
85A2-85A2	3R:8477828..8477828	P{GawB}NP7004	FBst0316762	insertion	sequence
85A2	3R:8478314..8478314	Mi{MIC}MI03663	FBst0037936	insertion	sequence
85A2	3R:8483960..8483960	P{EPgy2}EY14988	FBst0020960	insertion	sequence
85A2	3R:8488777..8488860	PBac{WH}f03499		insertion	sequence
85A2	3R:8500056..8500056	PBac{WH}f07165		insertion	sequence
85A2	3R:8503837..8503837	Mi{MIC}MI09009		insertion	sequence
85A2-85A2	3R:8510077..8511358	Or85b		gene	sequence
85A2-85A2	3R:8511734..8513022	Or85c		gene	sequence
85A2-85A2	3R:8517043..8517384	lncRNA:CR46228		gene	sequence
85A2-85A2	3R:8517868..8521378	CG11737		gene	sequence
85A2	3R:8518117..8518117	PBac{WH}CG11737[f03122]		insertion	sequence
85A2	3R:8518142..8518142	PBac{WH}CG11737[f06238]		insertion	sequence
85A2_r5	3R:8518318..8518318	PBac{SAstopDsRed}LL05620	FBst0320266	insertion	sequence
85A2	3R:8518318..8518318	PBac{GAL4D,EYFP}CG11737[PL00194]	FBst0019413	insertion	sequence
85A2	3R:8519341..8519341	Mi{MIC}CG11737[MI10802]	FBst0056074	insertion	sequence
85A2-85A2	3R:8519492..8526066	Df(3R)CRIMIC-CR70380	FBst0097310	deleted segment	sequence
85A2_r5	3R:8521507..8521507	PBac{SAstopDsRed}LL01680	FBst0319084	insertion	sequence
85A2	3R:8521508..8521508	PBac{PB}c00199		insertion	sequence
85A2-85A2	3R:8521658..8523520	CG31454		gene	sequence
85A2	3R:8522782..8522782	PBac{WH}CG31454[f01723]	FBst0018463	insertion	sequence
85A2	3R:8523117..8523117	Mi{MIC}CG31454[MI08926]	FBst0051128	insertion	sequence
85A2	3R:8523708..8523708	Mi{MIC}MI08408	FBst0044962	insertion	sequence
85A2-85A2	3R:8523944..8526667	CG31259		gene	sequence
85A2	3R:8524682..8524682	Mi{MIC}CG31259[MI11712]	FBst0056365	insertion	sequence
85A2_r6	3R:8524682..8524682	Mi{Trojan-GAL4.0}CG31259[MI11712-TG4.0]	FBst0077821	insertion	sequence