Coordinates for fourth chromosome Dfs from Riddle et al. 2008. - Cook, K.R. (2022)
We have some fourth chromosome deletions that arent showing up on G/JBrowse because molecular coordinates are missing. The ones in question are shown in Figure 2B and Table 3 of Riddle et al. (FBrf0205417). They were all generated by mobilizing Phsp26-pt-Tsv[4-M1030] (FBti0132457) and its insertion site (4:119408 in R5 and 4:1098782 in R6) defines their right ends. They all have different left ends. Table 3 gives their left ends in R5 and Ive translated them into R6. Df Fbid Proximal bp in R5 Phsp26-pt-Tsv[4-M1030] in R5 Proximal bp in R6 Phsp26-pt-Tsv[4-M1030] in R6 Combined R6 Df(4)8-M90 FBab0047541 931047 119,408 910421 1098782 4:910421;1098782 Df(4)8-M91 FBab0047542 931047 119,408 910421 1098782 4:910421;1098782 Df(4)8-M167 FBab0047543 1052491 119,408 1031865 1098782 4:1031865;1098782 Df(4)8-M175 FBab0047544 1083027 119,408 1062401 1098782 4:1062401;1098782 Df(4)8-M192 FBab0047545 928687 119,408 908061 1098782 4:908061;1098782 Df(4)8-M262 FBab0047547 1071672 119,408 1051046 1098782 4:1051046;1098782 Df(4)8-M318 FBab0047548 933545 119,408 912919 1098782 4:912919;1098782 Thanks! Kevin Kevin R. Cook, Ph.D. Bloomington Drosophila Stock Center Department of Biology Indiana University