FlyBase Aberration Report: Dmel\Df(2L)OD15

General Information

Symbol

Df(2L)OD15

Species

D. melanogaster

Name

FlyBase ID

FBab0001505

Feature type

chromosomal_deletion

Also Known As

Df(2L)OD-15

Computed Breakpoints include

36F7-36F9;37B10

Features within 36F7--37B10

Sequence coordinates

2L:19,049,132..19,049,265 [+] (Df(2L)OD15:bk2)

(Pentz and Wright, 1991)

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

diepoxybutane

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Stathakis et al., 1995)

Breakpoints

36F7-36F9;37B9-37C1

(Stathakis et al., 1995)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

l(2)36Fc << bk1 << l(2)36Fe << l(2)37Ba << bk2 << l(2)37Bb

Genetic mapping information

Comments

Breakpoint(s) molecularly mapped

(Palmer et al., 1993, Stathakis, 1991, Pentz et al., 1986)

Proximal DNA breakpoint between -64.65 and -65.25 kb (see deficiency map under l(2)37 for coordinates)

Comments on Cytology

Left limit of break 1 from polytene analysis (FBrf0084402) Right limit of break 1 from inclusion of l(2)36Fd (FBrf0093227) Left limit of break 2 from inclusion of Catsup (FBrf0044480) Right limit of break 2 from non-inclusion of Dox-A2 (FBrf0044480)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Acn

(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

Catsup

(Stathakis et al., 1999, Thor and Thomas, 1997, Wright, 1996, Stathakis et al., 1995, BDGP Project Members, 1994-1999, Pentz et al., 1986)

ham

(Moore et al., 2002)

hook

(Thor and Thomas, 1997, Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

l(2)36Fd

(Thor and Thomas, 1997)

l(2)36Fe

(Thor and Thomas, 1997)

l(2)37Ab

(Kahsai and Cook, 2018, Thor and Thomas, 1997)

l(2)37Ac

(Thor and Thomas, 1997)

l(2)37Ad

(Kahsai et al., 2016, Doerig, 1999.8.9, BDGP Project Members, 1994-1999)

l(2)37Bi

(Thor and Thomas, 1997)

l(2)37Bj

(Thor and Thomas, 1997)

l(2)k13805

(BDGP Project Members, 1994-1999)

mib2

(Thor and Thomas, 1997, Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

msl-1

(Palmer et al., 1993)

RpL30

(BDGP Project Members, 1994-1999)

tos

(Digilio et al., 1996)

tup

(Kahsai et al., 2016, Broihier and Skeath, 2002, Thor and Thomas, 1997, Goldman-Levi et al., 1996)

Partially deleted / disrupted

Molecular Data

Completely deleted

mRpL13

(Marygold et al., 2007)

RpL30

(Marygold et al., 2007)

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

amd

(Wright, 1996, Stathakis et al., 1995)

AsnRS

(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

brat

(Wright, 1996, Stathakis et al., 1995, BDGP Project Members, 1994-1999, Pentz et al., 1986)

cub

(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

DCTN6-p27

(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

Ddc

(Wright, 1996, Stathakis et al., 1995, BDGP Project Members, 1994-1999)

fs(2)lto1

(Digilio et al., 1996)

fs(2)ltoHL22

(Digilio et al., 1996)

l(2)36Fc

(Thor and Thomas, 1997)

l(2)37Bb

(Stathakis et al., 1995, Pentz et al., 1986)

l(2)37Cb

(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

l(2)37Cd

(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

l(2)37Db

(BDGP Project Members, 1994-1999)

Lim3

(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

mat(2)cell-G

(Digilio et al., 1996)

mat(2)ea-H

(Digilio et al., 1996)

msl-1

(Thor and Thomas, 1997)

ncm

(Coelho et al., 2005)

Phb1

(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

Polr1D

(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

Rpn3

(Wright, 1996, Stathakis et al., 1995, Pentz et al., 1986)

squ

(Digilio et al., 1996)

γTub37C

(Digilio et al., 1996, Wright, 1996, Stathakis et al., 1995)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

tup

(Certel and Thor, 2004)

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

Inferred to overlap with: Df(2L)BSC112.

(Deal and Cook, 2005.6.1)

NOT in combination with other aberrations

Flies heterozygous for the deletion do not show a Minute bristle phenotype.

(Marygold et al., 2007)

Fails to complement Df(2L)BSC112.

(Deal and Cook, 2005.6.1)

Stocks (2)

6081

108595

Notes on Origin

Discoverer

Gay, Contamine, Wright.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

37B9-37C1 breakpoint is between position -67.4 and -67.3 on the Ddc map relative to the HpaI restriction site near the 3' end of Ddc.

(Stathakis et al., 1995)

Synonyms and Secondary IDs (3)

Reported As

Symbol Synonym

Df(2L)OD-15

(Digilio et al., 1996, Palmer et al., 1993)

Df(2L)OD15

(Kahsai and Cook, 2018, Kahsai et al., 2016, Tao et al., 2007)

isl^Df

(Certel and Thor, 2004)

Name Synonyms

Secondary FlyBase IDs

References (24)

Report Sections

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