FlyBase Aberration Report: Dmel\Df(3L)R-E

General Information

Symbol

Df(3L)R-E

Species

D. melanogaster

Name

Deficiency (3L) Roughened

FlyBase ID

FBab0002344

Feature type

chromosomal_deletion

Also Known As

Df(3L)R^E

Computed Breakpoints include

62B8;62B11-62C1

Features within 62B8--62C1

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

X ray

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Fischer et al., 1997, Hariharan et al., 1991, Johnson and Friedman, 1983)

Breakpoints

62B7;62B12

(Hariharan et al., 1991, Johnson and Friedman, 1983)

62B8;62C1

(Fischer et al., 1997)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

Cdc37 << bk1 << R << ros << bk2 << sls

Genetic mapping information

Comments

Breakpoint(s) molecularly mapped

(Johnson et al., 1987)

Comments on Cytology

Ref: Sliter et al., 1989, Genetics 123: 327--336

(Cripps et al., 1994)

Ref: Johnson and Friedman, 1983, Proc. natn. Acad. Sci. USA. 80: 2990--2994

(Sliter et al., 1989)

Limits of break 1 from polytene analysis (FBrf0098784) Left limit of break 2 from inclusion of ros (FBrf0092078) Right limit of break 2 from polytene analysis (citation unavailable)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Aprt

(Johnson and Friedman, 1983)

dre4

(Sliter and Gilbert, 1992)

(Brand et al., 1997)

Rap1

(Fischer et al., 1997, Li et al., 1997, Hariharan et al., 1991)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Cdc37

(Cutforth and Rubin, 1994)

(Lee et al., 1993)

(Lee et al., 1993)

(Lee et al., 1993)

(Lee et al., 1993)

(Cripps et al., 1994)

α-Spec

(Lee et al., 1993)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Homozygotes have wild type eyes. R¹/Df(3L)R-E heterozygotes have a rougher eye phenotype that R¹ heterozygotes.

(Hariharan et al., 1991)

Stocks (0)

Notes on Origin

Discoverer

J. Bonner.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Df(3L)R-E fails to complement the mu2 phenotype but it is not known if this is due to a second site mutation.

(Wang et al., 1994)

Synonyms and Secondary IDs (5)

Reported As

Symbol Synonym

Df(3L)R-E

Df(3L)R^+E

(Johnson and Friedman, 1983)

Df(3L)R^E

(Radyuk et al., 2000, Asha et al., 1999, Bhat et al., 1999, Fischer et al., 1997, Li et al., 1997, Cripps et al., 1994, Cutforth and Rubin, 1994, Sliter and Gilbert, 1992, Hariharan et al., 1991, Sliter et al., 1989)

Df(3L)RE

(Brand et al., 1997)

Name Synonyms

Deficiency (3L) Roughened

Secondary FlyBase IDs

References (17)

Report Sections

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