FlyBase Aberration Report: Dmel\Df(3L)brm11

General Information

Symbol

Df(3L)brm11

Species

D. melanogaster

Name

Deficiency (3L) brahma

FlyBase ID

FBab0002363

Feature type

chromosomal_deletion

Also Known As

Df(3L)brm¹¹, Df(3)brm11

Computed Breakpoints include

72A3-72A4;72D1-72D5

Features within 72A3--72D5

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

P-element activity

PM hybrid dysgenesis

(Brizuela et al., 1994)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Zhimulev et al., 1998, Zhimulev et al., 1997.9.29, Brizuela et al., 1994)

Breakpoints

71F3-71F5;72D1-72D5

(Brizuela et al., 1994)

72A3-72A4;72C1

(Zhimulev et al., 1998, Zhimulev et al., 1997.9.29)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

bk1 << l(3)72Ad << l(3)72CDe << bk2 << Taf4

Genetic mapping information

Comments

Comments on Cytology

Pka-C3 gene lies within a 60kb region defined by the distal breakpoints of Df(3L)brm11 and Df(3L)st-f13.

(Melendez and Kalderon, 1995)

Limits of break 1 from polytene analysis (FBrf0098597) Limits of break 2 from polytene analysis (FBrf0072686)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Arl1

(Cooper and Kennison, 2011, Kennison, 2008.10.20, Melendez et al., 1995, Brizuela et al., 1994)

brm

(Cooper and Kennison, 2011, Brumby et al., 2004, Staehling-Hampton et al., 1999, Melendez et al., 1995, Brizuela et al., 1994, Tamkun et al., 1992)

Brr2

(Cooper and Kennison, 2011, Melendez et al., 1995, Brizuela et al., 1994)

Diap1

(Cooper and Kennison, 2011, Colussi et al., 2000, Wang et al., 1999, Szeged Stock Center, 1998-, Melendez et al., 1995)

elgi

(Von Stetina et al., 2008)

Hip14

(Cooper and Kennison, 2011, Ohyama et al., 2007, Melendez et al., 1995, Brizuela et al., 1994)

l(3)72CDb

(Melendez et al., 1995)

l(3)72CDc

(Cooper and Kennison, 2011, Melendez et al., 1995)

l(3)Me10

(Resino and Garcia-Bellido, 2004)

mib1

(Cooper and Kennison, 2011, Melendez et al., 1995)

Notum

(Cooper and Kennison, 2011, Melendez et al., 1995)

Pka-C3

(Melendez and Kalderon, 1995)

PolD1

(Cooper and Kennison, 2011, Melendez et al., 1995, Brizuela et al., 1994)

sff

(Baas et al., 2011)

Partially deleted / disrupted

Molecular Data

Completely deleted

mRpS31

(Marygold et al., 2007)

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

fang

(Myat et al., 2005)

gloin

(Myat et al., 2005)

Gyc76C

(Myat et al., 2005)

l(3)72Dn

(Kennison, 1995.6.21)

l(3)S114709

(Szeged Stock Center, 1998-)

Mbs

(Szeged Stock Center, 1998-, Kennison, 1995.6.21, BDGP Project Members, 1994-1999)

Taf4

(Sauer et al., 1996)

Zn72D

(Brumby et al., 2004)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

Dominant scutellar bristle phenotype is increased in trans to Df(3L)A27 to around 48%.

(Melendez et al., 1995)

Df(3L)brm11/Df(3L)st-g24 lethal Df(3L)brm11/Df(3L)st-e4 viable Df(3L)brm11/Df(3L)st-b11 viable

NOT in combination with other aberrations

Flies heterozygous for the deletion do not show a Minute bristle phenotype.

(Marygold et al., 2007)

Df(3L)brm11 embryos show defects in tracheal cell migration.

(Myat et al., 2005)

Heterozygotes show transformation of haltere to wing and of segment A5 to A4.

(Kankel et al., 2004)

The Df(3L)brm11 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion).

(Mason et al., 2004)

Shows dominant enhancement of dominant haltere phenotype caused by Ubx¹⁹⁵ and Ubx^9.22.

(Burnette et al., 1999)

Dominantly enhances the Kr^If-1/+ eye phenotype.

(Carrera et al., 1998)

No second site non-complementing phenotype with zip^Ebr and zip^mhc-c6.1.

(Halsell and Kiehart, 1998)

Midgut development of mutant embryos is wild type.

(Bilder and Scott, 1995)

Adults heterozygous for Df(3L)brm11 or Df(3L)th102 have a high frequency of duplications of the anterior scutellar bristles (around 24%).

(Melendez et al., 1995)

Dominant suppressor of Pc⁴.

(Brizuela et al., 1994)

Stocks (2)

Bloomington

3640

Df(3L)brm11/TM6C, cu¹ Sb¹ ca¹

Kyoto

107149

Df(3L)brm11/TM6C, cu¹ Sb¹ ca¹

Notes on Origin

Discoverer

Kennison and Tamkun, 1987.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

"72A3--4;72C1" was stated as revision.

(Zhimulev et al., 1998, Zhimulev et al., 1997.9.29)

Reduces the expression of homeotic genes.

(Tamkun et al., 1992)

Synonyms and Secondary IDs (9)

Reported As

Symbol Synonym

DF(3L)brm11

(LaJeunesse et al., 2001)

Df(3)brm11

(Wang et al., 2008, Resino and Garcia-Bellido, 2004)

Df(3L) brm11

(Zhimulev et al., 1998, Zhimulev et al., 1997.9.29)

Df(3L)brm1

(Myat et al., 2005)

Df(3L)brm11

(Komori et al., 2018, Galindo et al., 2014, Torres et al., 2014, Popkova et al., 2012, Weiss et al., 2012, Cooper and Kennison, 2011, Kennison, 2008.10.20, Von Stetina et al., 2008, Crest et al., 2007, Ohyama et al., 2007, Pepple et al., 2007, Choi et al., 2006)

Df(3L)brm¹¹

(Bettencourt da Cruz et al., 2008, Kankel et al., 2004, Gildea et al., 2000)

Df(3R)brm11

(Brumby et al., 2004)

Δbrm¹¹

(Baas et al., 2011)

Name Synonyms

Deficiency (3L) brahma

Secondary FlyBase IDs

References (63)

Report Sections

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