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General Information
Symbol
Df(1)BSC572
Species
D. melanogaster
Name
FlyBase ID
FBab0045467
Feature type
Computed Breakpoints include

[9F8-9F8];[10A3-10A3];

Sequence coordinates
X:10,890,940..10,890,940 (Df(1)BSC572:bk1)
X:11,092,253..11,092,253 (Df(1)BSC572:bk2)
Member of large scale dataset(s)
Dfs_BSC_set2

A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped.

Nature of Aberration
Cytological Order
Class of aberration (relative to wild type)
Class of aberration (relative to progenitor)
Breakpoints
Causes alleles
Carries alleles
Formalized genetic data
Genetic mapping information
Comments

Breakpoint based on progenitor insertion release 3 sequence coordinate X:10834192 , per R. Hoskins (Gene Disruption Project) personal communication, mapped forward to release 5.

Breakpoint from FlyBase's release 5 sequence location of progenitor insertion.

Comments on Cytology

Exelixis, Inc. determined the insertion site of the progenitor insertion PBac{RB}e04308 to be Release 3 genomic coordinate 10834026 on the X chromosome. The Gene Disruption project determined the insertion site of the progenitor insertion PBac{RB}e04308 to be Release 3 genomic coordinate 10834192 on the X chromosome. This corresponds to 10A4 on the Release 3 and Release 5 genome maps. The predicted position of P{XP}d09152 on the Release 5 map is 9F8. Consequently, the cytological breakpoints of Df(1)BSC572 are predicted to be 9F8;10A4.

Sequence Crossreferences
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks (1)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

The presence of P+PBac{XP5.RB3}BSC572 was verified using the PCR methods and primers described in FBrf0175003, with the substitution of the primer 5'-CCAATGCGTTTATTTCAGGTCACG-3' for the RB3' plus or RB3' minus primer in the Hybrid PCR protocol in the Supplementary Methods.

Synonyms and Secondary IDs (2)
Reported As
Name Synonyms
Secondary FlyBase IDs
    References (8)