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General Information
D. melanogaster
FlyBase ID
Feature type
Computed Breakpoints include


Sequence coordinates
X:4,101,232..4,101,613 (Df(1)BSC580:bk1)
X:4,688,080..4,688,080 (Df(1)BSC580:bk2)
Member of large scale dataset(s)

A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped.

Nature of Aberration
Cytological Order
Class of aberration (relative to wild type)
Class of aberration (relative to progenitor)
Causes alleles
Carries alleles
Formalized genetic data
Genetic mapping information

Breakpoint based on progenitor insertion release 3 sequence coordinate X:4428693 , per R. Hoskins (Gene Disruption Project) personal communication, mapped forward to release 5.

Breakpoint from FlyBase's release 5 sequence location of progenitor insertion.

Comments on Cytology

Exelixis, Inc. determined the insertion site of P{XP}d01801 to be Release 3 genomic coordinate 4428687 on the X chromosome. The Gene Disruption project determined the insertion site of P{XP}d01801 to be Release 3 genomic coordinate 4428693 on the X chromosome. This corresponds to 4C13 on the Release 3 and Release 5 genome maps. The predicted position of PBac{WH}f05811 on the Release 5 map is 4A5. Consequently, the cytological breakpoints of Df(1)BSC580 are predicted to be 4A5;4C13.

Sequence Crossreferences
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
Molecular Data
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
Molecular Data
Affected Genes Inferred by Location
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks (1)
Notes on Origin
Balancer / Genotype Variants of the Aberration
Separable Components
Other Comments

The presence of P+PBac{XP5.WH5}BSC580 was verified using the PCR methods and primers described in FBrf0175003.

Synonyms and Secondary IDs (1)
Reported As
Name Synonyms
Secondary FlyBase IDs
    References (7)