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General Information
Symbol
Dmel\Dark1
Species
D. melanogaster
Name
FlyBase ID
FBal0212709
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Key Links
Allele class
Nature of the Allele
Allele class
Mutations Mapped to the Genome
 
Type
Location
Additional Notes
References
Nucleotide change:

G17022141A

Reported nucleotide change:

G?A

Amino acid change:

W207term | Dark-PA; W207term | Dark-PB

Reported amino acid change:

?207term

Comment:

Reported as a nucleotide substitution resulting in the truncation of the protein after residue 206. Residue 207 is a tryptophan (TGG). G to A nucleotide change at the second or third position of the wild type Trp codon leads to a nonsense mutation (exact site of mutation unspecified). The mutation was annotated at the second base of the codon.

Associated Sequence Data
DNA sequence
Protein sequence
 
 
Progenitor genotype
Cytology
Nature of the lesion
Statement
Reference

Nucleotide substitution: G?A.

The G to A nucleotide substitution results in the truncation of the protein after residue 206. This mutation is predicted to affect both of the reported alternately spliced transcripts of the Ark gene.

Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

3.3 +/ 1.0 surviving EW3-sib cells are seen in homozygous larvae (these cells die during embryogenesis in wild type).

Homozygous Ark1 mutants exhibit delayed development (by about 2 days compared to controls). Approximately 70% of Ark1 mutants survive to early pupal stage compared to heterozygous controls.

Although larval and pupal tissue from Ark1 mutants appear grossly normal externally, some larval tissues derived from late third instar animals show hyperplasia. For example, the larval central nervous system is enlarged in Ark1 mutants. This is particularly evident in the ventral ganglion that appears to be elongated and contains longer nerve fibers. Approximately 40% of Ark1 mutants exhibit enlarged wing discs. In a smaller number of mutants, the eye discs are also enlarged.

Extra neurons in chordotonal cell clusters are observed in Ark1 mutant embryos. There are up to three extra cells per cluster in the majority of Ark1 mutant embryos. Gross morphological abnormalites in ventral nerve cord structure are also observed. For example, commissures can appear wider than in wild-type, and axons can appear more densely packed. In many animals, the ventral nerve cord can appear to be improperly compacted and the spacing between longitudinal axonal tracts is enlarged.

Apoptosis is almost absent (when compared to wild-type) in Ark1 mutant brain lobes, and is greatly reduced in win discs. Larval eye discs also display a dramatic decrease in the number of dying cells compared to wild-type. Caspase activity is also lower in Ark1 mutants.

Larval salivary gland removal is markedly delayed in Ark1 animals. They exhibit persistent or partially degraded salivary glands with an intact lumen at 20 hours relative to puparium formation at a time when, in wild-type animals, salivary glands have been completely removed. Indeed, intact salivary glands are still present at 30 hours relative to puparium formation. The persistent salivary glands are highly vacuolated. At the same time, adult structures, such as wings, are forming in Ark1 mutants, indicating continuing pupal development. No TUNEL-postive nuclei (indicating apoptosis) are observed in Ark1 mutant salivary glands at a time when wild-type glands are TUNEL-positive.

Midgut removal is largely normal in Ark1 animals, with morphological changes occurring as in wild-type, along with wild-type levels of apoptosis and caspase activity.

After irradiation with γ-rays, the basal number of Acridine Orange-positive cells (to monitor levels of apoptosis) in Ark1 animals is very low. In comparison, wild-type animals exhibit large increases in apoptosis in brain lobes, eye discs, and wing discs. However, no increase in apoptosis is observed in any tissue of Ark1 mutants, suggesting that these organs in Ark1 mutants are resistant to apoptosis induced by γ irradiation.

External Data
Interactions
Show genetic interaction network for Enhancers & Suppressors
Phenotypic Class
Phenotype Manifest In
Additional Comments
Genetic Interactions
Statement
Reference
Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Comments
Images (0)
Mutant
Wild-type
Stocks (0)
Notes on Origin
Discoverer
External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (4)
Reported As
Symbol Synonym
Name Synonyms
Secondary FlyBase IDs
    References (2)