FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Gene: Dmel\Act5C
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General Information
Symbol
Dmel\Act5C
Species
D. melanogaster
Name
Actin 5C
Annotation Symbol
CG4027
Feature Type
FlyBase ID
FBgn0000042
Gene Model Status
Stock Availability
Gene Summary
Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction. (UniProt, P10987)
Contribute a Gene Snapshot for this gene.
Also Known As

actin, F-actin, BAP47, β-actin, 5C actin

Key Links
Genomic Location
Cytogenetic map
Sequence location
Recombination map
1-14
RefSeq locus
NC_004354 REGION:5900861..5905399
Sequence
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
Function
Gene Ontology (GO) Annotations (11 terms)
Molecular Function (2 terms)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
inferred from sequence or structural similarity with UniProtKB:P60709
Biological Process (6 terms)
Terms Based on Experimental Evidence (5 terms)
CV Term
Evidence
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from expression pattern
inferred from expression pattern
involved_in tube formation
inferred from genetic interaction with FLYBASE:eys; FB:FBgn0031414
inferred from genetic interaction with FLYBASE:prom; FB:FBgn0259210
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
inferred by curator from GO:0031011
inferred from biological aspect of ancestor with PANTHER:PTN002631617
Cellular Component (3 terms)
Terms Based on Experimental Evidence (2 terms)
CV Term
Evidence
References
inferred from direct assay
inferred from direct assay
Terms Based on Predictions or Assertions (1 term)
CV Term
Evidence
References
is_active_in actin cytoskeleton
inferred from biological aspect of ancestor with PANTHER:PTN002631484
Protein Family (UniProt)
Belongs to the actin family. (P10987)
Catalytic Activity (EC/Rhea)
ATP hydrolysis activity
RHEA 13065:
Summaries
Gene Group (FlyBase)
ACTINS -
Actins are highly conserved eukaryotic filament-forming proteins that are major components of the cytoskeleton. Actin polymerisation is controlled by ATP binding and hydrolysis. Actins are involved in various cell processes including cell movement, muscle contraction, cell trafficking and mechanical support. (Adapted from PMID:21859859).
BRAHMA ASSOCIATED PROTEINS COMPLEX -
The Brahma associated proteins (BAP) complex is an ATP-dependent chromatin remodeling complex. (Adapted from FBrf0192510.)
INO80 COMPLEX -
The INO80 complex is an ATP-dependent chromatin remodeller that can mobilize nucleosomes. (Adapted from PMID:17316710).
POLYBROMO-CONTAINING BRAHMA ASSOCIATED PROTEINS COMPLEX -
Brahma (BRM) complexes are ATP-dependent chromatin remodeling complexes. The Polybromo-containing Brahma associated proteins (PBAP) complex is distinguished by the presence of polybromo and Bap170 subunits. (Adapted from FBrf0192510.)
NON-CANONICAL BRAHMA ASSOCIATED PROTEINS COMPLEX -
Brahma (BRM) complexes are ATP-dependent chromatin remodeling complexes. The non-canonical BAP (ncBAP) complex is distinguished by the presence of a Bicra subunit. (Adapted from FBrf0247407.)
Protein Function (UniProtKB)
Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.
(UniProt, P10987)
Phenotypic Description (Red Book; Lindsley and Zimm 1992)
Act5C: Actin in region 5C
Codes for cytoplasmic actin; transcribed throughout development; one of two actin genes transcribed in Kc cells and several other cell lines (Fyrberg, Mahaffy, Bond, and Davidson, 1983, Cell 33: 115-23). One of three actin genes expressed in the wing disc during wing development, each with its characteristic profile. Peak expression at 44h of pupal age, little or no expression at 60h rising again at 80h. 44h peak corresponds to time of maximum change in cell shape (Peterson, Bond, Mitchell, and Davidson, 1985, Dev. Genet. 5: 219-25). Transcripts present in the preblastoderm embryo suggesting maternal transcription; during blastoderm formation, Act5C transcripts accumulate at the periphery of the embryo; local concentrations of transcript observed in anterior and posterior midgut rudiments in stage 13 embryos; hybridization also observed in the developing ventral nervous system. Later in embryogenesis, transcript found in all tissues but with dramatic concentrations of transcripts in the anterior and posterior midgut and the proventriculus. Exon specific probes demonstrate that transcripts containing exon 1 tend to be concentrated in anterior portions of early embryos, including the anterior midgut primordium and the proventriculus, as well as in the posterior midgut primordium; during germ-band extension, small local concentrations of exon 2 transcripts are seen in posterior and ventral regions of the embryo (Burn, Vigoreaux, and Tobin, 1989, Dev. Biol. 131: 345-55).
Gene Model and Products
Number of Transcripts
5
Number of Unique Polypeptides
1

Please see the JBrowse view of Dmel\Act5C for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Structure
Protein 3D structure   (Predicted by AlphaFold)   (AlphaFold entry P10987)

If you don't see a structure in the viewer, refresh your browser.
Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures
Crossreferences
PDB - An information portal to biological macromolecular structures
Comments on Gene Model

Gene model reviewed during 5.55

Gene model reviewed during 5.46

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.56

Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
FBtr0070822
1637
376
FBtr0070823
2653
376
FBtr0100662
2252
376
FBtr0100663
1928
376
FBtr0345894
2863
376
Additional Transcript Data and Comments
Reported size (kB)

1.97 (northern blot)

1.9, 1.77 (northern blot)

Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
UniProt
RefSeq ID
GenBank
FBpp0070787
41.8
376
5.16
FBpp0070788
41.8
376
5.16
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

Additional Polypeptide Data and Comments
Reported size (kDa)
Comments

Small Act5C-derived peptides identified by nano LC-MS/MS: SSSSLEKSYELPDGQVI.

The brm core complex appears to comprise 10 polypeptides. These include brm, mor, osa, Bap60, Snr1, Bap111, Bap55, Bap170, Bap26,and Act42A or Act5C proteins.

The BRM complex was purified from Drosophila embryos using two distinct purification protocols and the subunit composition was determined. Eight major proteins were consistently observed including brm, Snr1, Bap55 (a novel actin-related protein), Bap60, Bap111, Hsc70-4, and mor proteins. The complex also contains a cytoplasmic actin (Act42A or Act5C).

External Data
Subunit Structure (UniProtKB)

Interacts with Rab6.

(UniProt, P10987)
Post Translational Modification

N-terminal cleavage of acetylated cysteine of immature actin by ACTMAP.

Oxidation of Met-45 by Mical to form methionine sulfoxide promotes actin filament depolymerization. Methionine sulfoxide is produced stereospecifically, but it is not known whether the (S)-S-oxide or the (R)-S-oxide is produced.

(UniProt, P10987)
Crossreferences
PDB - An information portal to biological macromolecular structures
Linkouts
Sequences Consistent with the Gene Model
Nucleotide / Polypeptide Records
 
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Act5C using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Expression Data
Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.77

Transcript Expression
No Assay Recorded
Stage
Tissue/Position (including subcellular localization)
Reference
expression microarray
Stage
Tissue/Position (including subcellular localization)
Reference
adult fat body

Comment: cyclical, peak ZT9-12

in situ
Stage
Tissue/Position (including subcellular localization)
Reference
organism | ubiquitous

Comment: maternally deposited

Additional Descriptive Data

Expressed cyclically in the adult fat body.

Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Evidence
References
inferred from direct assay
inferred from direct assay
Expression Deduced from Reporters
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Reporter: P{Act5C-GAL4.Hb}
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Reporter: P{act-lacZ.B}
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Reporter: P{rtTA.B}
Stage
Tissue/Position (including subcellular localization)
Reference
High-Throughput Expression Data
Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\Act5C in JBrowse
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyExpress - Embryonic expression images (BDGP data)
  • Stages(s) 9-10
  • Stages(s) 13-16
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 51 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 35 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of Act5C
Transgenic constructs containing regulatory region of Act5C
Aberrations (Deficiencies and Duplications) ( 3 )
Variants
Variant Molecular Consequences
Alleles Representing Disease-Implicated Variants
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
border follicle cell & filopodium
Orthologs
Human Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Homo sapiens (Human) (43)
11 of 14
Yes
Yes
5  
11 of 14
Yes
Yes
1  
7 of 14
No
Yes
7 of 14
No
Yes
7 of 14
No
Yes
1  
6 of 14
No
Yes
6 of 14
No
No
5 of 14
No
Yes
4 of 14
No
Yes
4 of 14
No
No
1  
4 of 14
No
No
1  
4 of 14
No
Yes
4 of 14
No
Yes
4 of 14
No
No
4 of 14
No
No
4 of 14
No
Yes
4 of 14
No
Yes
3 of 14
No
No
2  
3 of 14
No
No
1  
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
No
3 of 14
No
No
1  
3 of 14
No
No
1  
3 of 14
No
No
1  
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
No
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
Yes
2 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
2 of 14
No
Yes
1 of 14
No
No
1 of 14
No
Yes
Model Organism Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Rattus norvegicus (Norway rat) (31)
12 of 14
Yes
Yes
11 of 14
No
Yes
10 of 14
No
Yes
7 of 14
No
Yes
7 of 14
No
Yes
7 of 14
No
Yes
7 of 14
No
No
6 of 14
No
Yes
5 of 14
No
Yes
4 of 14
No
Yes
4 of 14
No
Yes
4 of 14
No
No
4 of 14
No
No
4 of 14
No
Yes
4 of 14
No
Yes
3 of 14
No
No
3 of 14
No
No
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
Yes
2 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
Mus musculus (laboratory mouse) (29)
12 of 14
Yes
Yes
12 of 14
Yes
Yes
7 of 14
No
Yes
7 of 14
No
Yes
7 of 14
No
Yes
7 of 14
No
Yes
7 of 14
No
No
5 of 14
No
Yes
4 of 14
No
Yes
4 of 14
No
Yes
4 of 14
No
Yes
4 of 14
No
No
4 of 14
No
No
4 of 14
No
Yes
4 of 14
No
Yes
3 of 14
No
No
3 of 14
No
No
3 of 14
No
Yes
3 of 14
No
Yes
3 of 14
No
No
3 of 14
No
No
3 of 14
No
No
2 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
Yes
Xenopus tropicalis (Western clawed frog) (15)
11 of 13
Yes
Yes
10 of 13
No
Yes
5 of 13
No
Yes
5 of 13
No
Yes
5 of 13
No
Yes
4 of 13
No
Yes
3 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
Yes
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
Danio rerio (Zebrafish) (23)
13 of 14
Yes
Yes
13 of 14
Yes
Yes
7 of 14
No
Yes
7 of 14
No
Yes
7 of 14
No
Yes
7 of 14
No
Yes
7 of 14
No
No
6 of 14
No
No
6 of 14
No
Yes
4 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
No
2 of 14
No
Yes
2 of 14
No
No
1 of 14
No
No
1 of 14
No
No
Caenorhabditis elegans (Nematode, roundworm) (12)
13 of 14
Yes
Yes
13 of 14
Yes
Yes
13 of 14
Yes
Yes
12 of 14
No
Yes
8 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
Yes
3 of 14
No
No
2 of 14
No
No
Anopheles gambiae (African malaria mosquito) (14)
11 of 12
Yes
Yes
Arabidopsis thaliana (thale-cress) (20)
13 of 13
Yes
Yes
13 of 13
Yes
Yes
12 of 13
No
Yes
11 of 13
No
No
11 of 13
No
No
11 of 13
No
No
11 of 13
No
No
11 of 13
No
No
6 of 13
No
Yes
5 of 13
No
Yes
5 of 13
No
Yes
4 of 13
No
No
4 of 13
No
Yes
3 of 13
No
No
3 of 13
No
Yes
3 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
1 of 13
No
No
Saccharomyces cerevisiae (Brewer's yeast) (10)
13 of 13
Yes
Yes
0  
3 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
Yes
2 of 13
No
No
1 of 13
No
No
1 of 13
No
No
Schizosaccharomyces pombe (Fission yeast) (11)
12 of 12
Yes
Yes
3 of 12
No
No
2 of 12
No
No
2 of 12
No
No
2 of 12
No
No
2 of 12
No
No
2 of 12
No
No
2 of 12
No
No
1 of 12
No
No
1 of 12
No
No
1 of 12
No
Yes
Escherichia coli (enterobacterium) (0)
Other Organism Orthologs (via OrthoDB)
Data provided directly from OrthoDB:Act5C. Refer to their site for version information.
Paralogs
Paralogs (via DIOPT v9.1)
Drosophila melanogaster (Fruit fly) (14)
12 of 13
11 of 13
11 of 13
11 of 13
11 of 13
6 of 13
5 of 13
5 of 13
5 of 13
5 of 13
4 of 13
4 of 13
4 of 13
3 of 13
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 13 )
    Modifiers Based on Experimental Evidence ( 3 )
    Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    Hsap\LOC100288966
    3 of 14
        Functional Complementation Data
        Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
        Interactions
        Summary of Physical Interactions
        Interaction Browsers

        Please see the Physical Interaction reports below for full details
        RNA-protein
        Physical Interaction
        Assay
        References
        protein-protein
        Physical Interaction
        Assay
        References
        Summary of Genetic Interactions
        Interaction Browsers

        Please look at the allele data for full details of the genetic interactions
        Starting gene(s)
        Interaction type
        Interacting gene(s)
        Reference
        Starting gene(s)
        Interaction type
        Interacting gene(s)
        Reference
        External Data
        Subunit Structure (UniProtKB)
        Interacts with Rab6.
        (UniProt, P10987 )
        Linkouts
        BioGRID - A database of protein and genetic interactions.
        DroID - A comprehensive database of gene and protein interactions.
        MIST (genetic) - An integrated Molecular Interaction Database
        MIST (protein-protein) - An integrated Molecular Interaction Database
        Pathways
        Signaling Pathways (FlyBase)
        Metabolic Pathways
        FlyBase
        External Links
        External Data
        Linkouts
        KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
        SignaLink - A signaling pathway resource with multi-layered regulatory networks.
        Class of Gene
        Genomic Location and Detailed Mapping Data
        Chromosome (arm)
        X
        Recombination map
        1-14
        Cytogenetic map
        Sequence location
        FlyBase Computed Cytological Location
        Cytogenetic map
        Evidence for location
        5C7-5C7
        Limits computationally determined from genome sequence between P{EP}CG15770EP390 and P{EP}Act5CEP1604&P{EP}EP444
        Experimentally Determined Cytological Location
        Cytogenetic map
        Notes
        References
        5C3-5C6
        (determined by in situ hybridisation) 5C5--8 (determined by in situ hybridisation) 5D1--2 (determined by in situ hybridisation) 5C3--8 (determined by in situ hybridisation) 5C5--6 (determined by in situ hybridisation) 5C5--10 (determined by in situ hybridisation)
        5C5-5C10
        (determined by in situ hybridisation) 5C5--8 (determined by in situ hybridisation)
        5C3-5C8
        (determined by in situ hybridisation) 5C5--8 (determined by in situ hybridisation)
        5C5-5C8
        (determined by in situ hybridisation) 5C5--6 (determined by in situ hybridisation) 5C3--9 (determined by in situ hybridisation) 5D1--2 (determined by in situ hybridisation)
        5C3-5C6
        (determined by in situ hybridisation) 5C5--8 (determined by in situ hybridisation)
        Experimentally Determined Recombination Data
        Left of (cM)
        Right of (cM)
        Notes
        Stocks and Reagents
        Stocks (68)
        Genomic Clones (7)
         

        Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

        cDNA Clones (202)
         

        Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

        cDNA clones, fully sequenced
        BDGP DGC clones
        Other clones
        Drosophila Genomics Resource Center cDNA clones

        For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

        cDNA Clones, End Sequenced (ESTs)
        Other clones
        RNAi and Array Information
        Linkouts
        DRSC - Results frm RNAi screens
        Antibody Information
        Laboratory Generated Antibodies
         
        Commercially Available Antibodies
         
        Developmental Studies Hybridoma Bank - Monoclonal antibodies for use in research
        Cell Line Information
        Publicly Available Cell Lines
        Other Stable Cell Lines
         
        Other Comments

        Candidate stable intronic sequence RNA (sisRNA) identified within 5'UTR of this gene.

        DNA-protein interactions: genome-wide binding profile assayed for Act5C protein in Kc167 cells; see Chromatin_types_NKI collection report. Individual protein-binding experiments listed under "Samples" at GEO_GSE22069 (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE22069).

        S2 cells treated with dsRNA generated against this gene show reduced phagocytosis of Candida albicans compared to untreated cells.

        dsRNA directed against this gene causes defects in cytokinesis when tested in an RNAi screen in S2 cells.

        RNAi screen using dsRNA made from templates generated with primers directed against this gene causes a binucleation phenotype with microtubule extensions when assayed in Kc167 cells.

        Act5C has a role in the individualisation during spermatogenesis.

        Age related changes in Act5C expression have been studied by Northern analysis.

        Ecdysteroid-regulated gene.

        The level of Act5C RNA remains fairly constant throughout the D.melanogaster life span.

        Analysis of Act5C promoter activation shows that one cis-acting region in P\Tcore and two such regions in P\TKP and P\TKP' elements are associated with activation only when the 20bp sequence around the Zw transcription start site is placed in front of the Act5C promoter. In vitro transcription analysis of P\T sequences activating Zw-Act5C transcriptional gene reveals three distinct cis-acting regions, one in P\Tcore and two in the P\TKP and P\TKP' elements, that are required for overexpression. Putative transcriptional regulatory proteins, identified in gel retardation assays, bind to each of the cis-acting regions.

        Nascent chain nuclear run-on assays in KC161 cells reveal different responses to heat shock for different genes. Transcription of His1 is severely inhibited under mild heat shocks, of Act5C decreases proportionally with increasing temperature while that of the core histone genes or the heat shock cognates is repressed only under extreme heat shock. Increased transcription of the heat shock genes is observed within 1-2 mins of heat shock and maximal rates were reached within 2-5 minutes. Rates of transcription vary over a 20-fold range.

        Act5C promoter driven expression is just as efficient in D.melanogaster embryos and in L.cuprina embryos.

        Sequence analysis demonstrates insect muscle actins form a distinct family of closely related proteins significantly diverged from cytoplasmic actins.

        Translation of actin RNA in early embryos injected with initiation factors has been studied.

        Nuclear extracts prepared from developmentally staged embryos were transcriptionally active for several non-muscle genes: Tm2 non-muscle promoter, Act5C, ftz, Adh and en.

        Detailed analysis of the proximal promoter and the elements required for its function.

        The expression of HIS-C genes during oogenesis has been studied, and compared to periods of DNA synthesis and actin expression during this developmental stage.

        Codes for cytoplasmic actin; transcribed throughout development; one of two actin genes transcribed in Kc cells and several other cell lines (FBrf0038990). One of three actin genes expressed in the wing disc during wing development, each with its characteristic profile. Peak expression at 44h of pupal age, little or no expression at 60h rising again at 80h. 44h peak corresponds to time of maximum change in cell shape (FBrf0042391). Transcripts present in the preblastoderm embryo suggesting maternal transcription; during blastoderm formation, Act5C transcripts accumulate at the periphery of the embryo; local concentrations of transcript observed in anterior and posterior midgut rudiments in stage 13 embryos; hybridization also observed in the developing ventral nervous system. Later in embryogenesis, transcript found in all tissues but with dramatic concentrations of transcripts in the anterior and posterior midgut and the proventriculus. Exon specific probes demonstrate that transcripts containing exon 1 tend to be concentrated in anterior portions of early embryos, including the anterior midgut primordium and the proventriculus, as well as in the posterior midgut primordium; during germ-band extension, small local concentrations of exon 2 transcripts are seen in posterior and ventral regions of the embryo (FBrf0049492). A ecdysone regulated gene (FBrf0064343). The Act5C distal promoter is often used in constructs to give 'constitutive' expression of a sequence under its control.

        Relationship to Other Genes
        Source for database merge of

        Source for merge of: Act5C anon- EST:fe2D2

        Source for merge of: Act5C l(1)G0009

        Source for merge of: Act5C l(1)G0079 l(1)G0330 l(1)G0025 l(1)G0117 l(1)G0420 l(1)G0010 l(1)G0177 l(1)G0245 l(1)G0486

        Additional comments

        The Act5C gene may be derived from the Act57B gene by retroposition.

        "l(1)G0449" may affect "Act5C".

        Nomenclature History
        Source for database identify of
        Nomenclature comments
        Etymology
        Synonyms and Secondary IDs (61)
        Reported As
        Symbol Synonym
        A4V404_DROME
        Act5C
        (Crane et al., 2025, Karling and Weavers, 2025, Tsakiri et al., 2025, Chen et al., 2024, Kristó et al., 2024, Mori et al., 2024, Prelic et al., 2024, Sutton et al., 2024, Erokhin et al., 2023, Sanal et al., 2023, Ugrankar-Banerjee et al., 2023, Borkúti et al., 2022, Erokhin et al., 2021, Salim et al., 2021, Shieh et al., 2021, Xie et al., 2021, Yang et al., 2021, Barish et al., 2020, Chetverina et al., 2020, Meyer-Nava et al., 2020, Meyer-Nava et al., 2020, Shilova et al., 2020, Vásquez-Procopio et al., 2020, Guan et al., 2019, Jiang et al., 2019, Kobb et al., 2019, Luhur et al., 2019, Myat et al., 2019, Ikawa and Sugimura, 2018, Ordonez et al., 2018, Richier et al., 2018, Sokolova et al., 2018, Bower et al., 2017, Grintsevich et al., 2017, Min et al., 2017, Orr et al., 2017, Kupriyanova et al., 2016, Lefebvre et al., 2016, Ogneva et al., 2016, Dong et al., 2015, Kollmar, 2015.9.15, Pek et al., 2015, Ramdas et al., 2015, Ashwal-Fluss et al., 2014, Chapin et al., 2014, DeSalvo et al., 2014, dos Santos, 2014, Hsiao et al., 2014, Merlo et al., 2014, Molnár et al., 2014, Nie et al., 2014, Radermacher et al., 2014, Salvany et al., 2014, Chan et al., 2013, Dantoft et al., 2013, Kwon et al., 2013, Taliaferro et al., 2013, Wilson et al., 2013, Duan et al., 2012, Kaushik et al., 2012, Matzat et al., 2012, White-Cooper, 2012, Adamson et al., 2011, Chan et al., 2011, Cherbas et al., 2011, Clark et al., 2011, Friedman et al., 2011, Jin et al., 2011, Ling and Salvaterra, 2011, Matta et al., 2011, Rees et al., 2011, Rohn et al., 2011, Toku et al., 2011, Xu et al., 2011, Blanco et al., 2010, Kallappagoudar et al., 2010, Kong et al., 2010, Mathur et al., 2010, Monier et al., 2010, Pauli et al., 2010, Popodi, 2010.10.8, Repiso et al., 2010, Saulière et al., 2010, Sens et al., 2010, Venken et al., 2010, Wasbrough et al., 2010, Wasbrough et al., 2010, Hessle et al., 2009, Tanaka et al., 2009, Bai et al., 2008, Fisher et al., 2008, Hanai et al., 2008, Penney et al., 2008, Yang et al., 2008, Clark et al., 2007, Derré et al., 2007, Fulga et al., 2007, Grieder et al., 2007, Muse et al., 2007, Ninov et al., 2007, Quinones-Coello, 2007, Stuart et al., 2007, Beller et al., 2006, Dorus et al., 2006, Dorus et al., 2006, Jiang and Crews, 2006, Mikhaylova et al., 2006, Montana and Littleton, 2006, Ni et al., 2006, Peyre et al., 2006, Stroschein-Stevenson et al., 2006, Walser et al., 2006, Delanoue and Davis, 2005, Laviolette et al., 2005)
        anon-EST:fe2D2
        chrX:5748184..5748304
        β-actin/Bap47
        Name Synonyms
        Dm-actin5C
        anon-fast-evolving-2D2
        cellular cytoskeletal β-actin
        Secondary FlyBase IDs
        • FBgn0025223
        • FBgn0026673
        • FBgn0026683
        • FBgn0026712
        • FBgn0027215
        • FBgn0027255
        • FBgn0027284
        • FBgn0027327
        • FBgn0028278
        • FBgn0040144
        • FBgn0040204
        Datasets (1)
        Study focus (1)
        Experimental Role
        Project
        Project Type
        Title
        • transgene_used
        Protein profiling reveals five principal chromatin types in Drosophila cells.
        Study result (0)
        Result
        Result Type
        Title
        External Crossreferences and Linkouts ( 119 )
        Sequence Crossreferences
        NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
        GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.
        UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information
        UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
        Other crossreferences
        AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.
        BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
        DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
        EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
        FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
        FlyMine - An integrated database for Drosophila genomics
        KEGG Genes - Molecular building blocks of life in the genomic space.
        MARRVEL_MODEL - MARRVEL (model organism gene)
        PDB - An information portal to biological macromolecular structures
        Linkouts
        BioGRID - A database of protein and genetic interactions.
        Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
        DroID - A comprehensive database of gene and protein interactions.
        DRSC - Results frm RNAi screens
        Developmental Studies Hybridoma Bank - Monoclonal antibodies for use in research
        Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
        FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
        FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
        Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
        Flygut - An atlas of the Drosophila adult midgut
        FlyMet - A comprehensive tissue-specific metabolomics resource for Drosophila.
        KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
        MIST (genetic) - An integrated Molecular Interaction Database
        MIST (protein-protein) - An integrated Molecular Interaction Database
        SignaLink - A signaling pathway resource with multi-layered regulatory networks.
        References (881)