Cha
vesicular transport protein necessary for packaging the neurotransmitter acetylcholine into synaptic vesicles - expressed in premotor interneurons
Please see the JBrowse view of Dmel\ChAT for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Tissue-specific extension of 3' UTRs observed during later stages (FBrf0218523, FBrf0219848); all variants may not be annotated
Shares 5' UTR with upstream gene.
Unconventional translation start (GUG) postulated; FBrf0052176.
Gene model reviewed during 5.54
Low-frequency RNA-Seq exon junction(s) not annotated.
4.0 (northern blot)
4 (northern blot)
None of the polypeptides share 100% sequence identity.
67 (kD)
The 54 kDa and 13 kDa chains exist as a heterodimer.
The N-terminus of choline O-acetyltransferase 67 kDa and 54 kDa chains are blocked.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\ChAT using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Comment: junction of anterior midgut and acid-secreting portion of the larval midgut
ChAT co-localizes with expression driven by ScerGAL4S3.Hug in larval Hugin neuron of the protocerebrum, and larval Hugin neuron of the ventral nerve cord/larval Hugin neuron of the ventral nerve cord as well as, weakly, larval Hugin neuron of the corpus cardiacum.
Cha protein labels a subset of neurons in the adult medulla cortex, including the medullary intrinsic neuron Mi1.
Cha protein labels the axonal projections in the central brain of Rh5 and Rh6 photoreceptors of Bolwig organ.
Cha protein is expressed in a subset of neurons of the lamina, medulla, lobula and lobula plate.
ChAT is expressed at the junction of anterior midgut and acid-secreting portion of the larval midgut. Expression does not overlap that of ScerGAL4ChAT.7.4 in the midgut.
Expression of Cha is seen in both large and small monopolar neurons of the lamina.
Cha protein has widespread expression in the ventral nerve cord and it is in close apposition to the processes of neurons labelled by ScerGAL4Ccap.PP.
The axon terminals of Bolwig's nerve that contact the dendritic arborizations of the lateral neurons (LNs) are immunopositive for Cha.
Comment: when combined with P{R41A01-p65.AD} (combination referred to as 'Chat ∩ R41A01')
Comment: when combined with P{R41A01-p65.AD} (combination referred to as 'Chat ∩ R41A01')
Comment: when combined with TI{2A-p65(AD)::Zip+}unc-4AD
Comment: when combined with TI{2A-p65(AD)::Zip+}unc-4AD
Comment: strong expression
Comment: strong expression
Comment: strong expression
Comment: faint expression
Comment: when combined with P{ort-GAL4.AD.C1-3}
Comment: when combined with P{ort-GAL4.AD.C1-3}
Comment: when combined with P{ort-GAL4.AD.C1-3}
Comment: when combined with P{ort-GAL4.AD.C1-3}
Comment: when combined with P{R42F06-p65.AD}
Comment: when combined with P{R42F06-p65.AD}
Comment: when combined with P{R42G02-p65.AD}
Comment: surface layer
JBrowse - Visual display of RNA-Seq signals
View Dmel\ChAT in JBrowse
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
polyclonal
A complete Cha cDNA is able to direct the expression of hydrophilic and amphiphilic enzyme activity in Xenopus oocyte.
Proper expression of Cha requires at least 7.4kb of upstream region.
Homozygotes and hemizygotes for either of the original two non-conditionally mutant alleles, Df(3R)Cha9 or Chal2, show no detectable choline acetyl transferase enzymatic activity as late embryos, which is when the mutants die; Either of two temperature-sensitive alleles, Chats1 or Chats2, causes a variety of phenotypic defects when hemizygous or homozygous: reduced viability at 25oC and death at 29oC (Chats1), reduced viability at 18oC and death at 22oC or above (Chats2). Chats1 or Chats2 show heat-induced abnormalities of general mobility and male courtship ability.
Recombinant Cha enzyme shares the same kinetic properties and same catalytic residues as the enzyme from a variety of different sources.
A major point of regulation of Cha expression may occur at the transcriptional level.
The site of cleavage of the 67kD enzyme that gives rise to the clipped enzyme polypeptide has been determined. The cleavage site has identified an important functional domain and may be the result of cellular processing.
Immunohistochemical staining of ChAT reveals wide distribution in CNS; this staining is strong in Chats1 at permissive temperature but diminishes after in-vivo heat treatment (FBrf0046829); Chats2 staining is poor even at permissive temperature and diminishes after heating the flies.
Whereas wild type exhibits two molecular forms of ChAT activity after isoelectric focusing, homogenates of Chats1 lead to a single form and of Chats2 to two forms shifted to higher-than-normal pI. Chats1 and Chats2 also cause ChAT activity to have accentuated thermolability in vitro, plus gradual but reversible decline of enzymatic activity and of acetylcholine levels following transfer of low-temperature reared mutants to 29-30oC or above.
Cha and VAChT share a common first exon. The remainder of the VAChT transcript contains a single coding exon residing entirely within the first intron of Cha. The relative levels of Cha and VAChT transcript differ in different tissues or Cha mutants indicating independent regulation of Cha and VAChT transcripts may occur post-transcriptionally.
Source for identity of: ChAT Cha
The gene symbol "Cha" has been changed to "ChAT" in order to reflect the clear preference in the literature, and also to reduce confusion with the "cha" ("chaff") gene symbol, from which it differed only by case.