FB2026_02 , released June 18, 2026
FB2026_02 , released June 18, 2026
Gene: Dmel\srp
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General Information
Symbol
Dmel\srp
Species
D. melanogaster
Name
serpent
Annotation Symbol
CG3992
Feature Type
FlyBase ID
FBgn0003507
Gene Model Status
Stock Availability
Gene Summary
serpent (srp) encodes an important transcription factor for the proper development of mesodermal derivatives such as fat body, hemocytes and limph gland. It contributes to endoderm development, hemopoiesis and glucose metabolism. [Date last reviewed: 2019-03-14] (FlyBase Gene Snapshot)
Also Known As

dGATAb, GATAb, GATA, l(3)01549, ABF

Key Links
Genomic Location
Cytogenetic map
Sequence location
Recombination map
3-58
RefSeq locus
NT_033777 REGION:15986152..16004085
Sequence
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
Function
Gene Ontology (GO) Annotations (38 terms)
Molecular Function (10 terms)
Terms Based on Experimental Evidence (7 terms)
CV Term
Evidence
References
Terms Based on Predictions or Assertions (5 terms)
CV Term
Evidence
References
inferred from sequence or structural similarity with UniProtKB:P15976
inferred from sequence or structural similarity with UniProtKB:P23769
inferred from electronic annotation with InterPro:IPR039355
inferred from electronic annotation with InterPro:IPR013088
Biological Process (26 terms)
Terms Based on Experimental Evidence (16 terms)
CV Term
Evidence
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from expression pattern
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
involved_in hemopoiesis
inferred from expression pattern
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
Terms Based on Predictions or Assertions (11 terms)
CV Term
Evidence
References
inferred from biological aspect of ancestor with PANTHER:PTN000800998
traceable author statement
involved_in dorsal closure
traceable author statement
traceable author statement
involved_in endoderm formation
traceable author statement
involved_in midgut development
traceable author statement
Cellular Component (2 terms)
Terms Based on Experimental Evidence (2 terms)
CV Term
Evidence
References
is_active_in nucleus
inferred from direct assay
Terms Based on Predictions or Assertions (1 term)
CV Term
Evidence
References
is_active_in nucleus
inferred from biological aspect of ancestor with PANTHER:PTN001600628
Gene Group (FlyBase)
Protein Family (UniProt)
-
Summaries
Gene Snapshot
serpent (srp) encodes an important transcription factor for the proper development of mesodermal derivatives such as fat body, hemocytes and limph gland. It contributes to endoderm development, hemopoiesis and glucose metabolism. [Date last reviewed: 2019-03-14]
Gene Group (FlyBase)
GATA TRANSCRIPTION FACTORS -
GATA transcription factors contain one or two zinc fingers with the amino acid sequence CX2CX17CX2C (where x is any other amino acid) that can bind the consensus DNA sequence (A/T) GATA (A/G). (Adapted from FBrf0195200).
Protein Function (UniProtKB)
May function as a transcriptional activator protein and may play a key role in the organogenesis of the fat body. Binds a sequence element (5'-[TA]GATAA-3') found in the larval promoters of all known alcohol dehydrogenase (ADH) genes. Acts as a homeotic gene downstream of the terminal gap gene HKB to promote morphogenesis and differentiation of anterior and posterior midgut. Together with transcriptional cofactor Bfc directly binds the promoter of phagocytic receptor crq/croquemort to upregulate its expression and stimulate efferocytosis in response to apoptotic cells, including during embryogenesis (PubMed:34860835).
(UniProt, P52172)
Phenotypic Description (Red Book; Lindsley and Zimm 1992)
srp: serpent
Embryonic lethal; germ-band shortening incomplete.
Summary (Interactive Fly)

transcription factor - zinc finger - GATA family - plays a pivotal role in promoting morphogenesis of the anterior and posterior midgut - necessary for embryonic fat-cell differentiation and other mesodermal derivatives such as hemocytes and lymph gland - regulates hemopoiesis and glucose metabolism

Gene Model and Products
Number of Transcripts
7
Number of Unique Polypeptides
6

Please see the JBrowse view of Dmel\srp for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Structure
Protein 3D structure   (Predicted by AlphaFold)   (AlphaFold entry P52172)

If you don't see a structure in the viewer, refresh your browser.
Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures
Crossreferences
Comments on Gene Model

Multiphase exon postulated: exon reading frame differs in alternative transcripts; overlap >20aa.

Low-frequency RNA-Seq exon junction(s) not annotated.

Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.

Gene model reviewed during 5.47

Gene model reviewed during 6.32

Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
FBtr0083215
4459
1264
FBtr0083216
4414
1249
FBtr0100595
3841
746
FBtr0306244
3796
731
FBtr0335423
3274
746
FBtr0335424
3377
469
FBtr0479894
3037
781
Additional Transcript Data and Comments
Reported size (kB)

4.004 (longest cDNA)

3.5 (northern blot)

Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
UniProt
RefSeq ID
GenBank
FBpp0082669
134.2
1264
7.02
FBpp0082670
133.8
1249
7.05
FBpp0100052
79.8
746
8.43
FBpp0307406
79.8
746
8.43
FBpp0428227
83.8
781
8.47
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

746 aa isoforms: srp-PD, srp-PF
Additional Polypeptide Data and Comments
Reported size (kDa)

779 (aa); 82 (kD predicted)

Comments
External Data
Subunit Structure (UniProtKB)

Interacts (via GATA-type Zn-finger domain) with Bfc; this interaction enhances srp binding to the promoter of crq/croquemort.

(UniProt, P52172)
Domain

The GATA-type Zn-finger domain is required for binding DNA and interacting with Bfc (PubMed:34860835). Isoform 2 differs from isoform 1 in that it has an additional zinc finger domain. It is unknown if both zinc fingers are required for DNA binding or interaction with Bfc (Probable).

(UniProt, P52172)
Crossreferences
InterPro - A database of protein families, domains and functional sites
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\srp using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Expression Data
Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.66

Transcript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data

srp transcript expression seen in this study agrees with the results previously documented in FBrf0065324. It is proposed that one of the mesodermal patches of srp expression seen at the blastoderm stage is the hemocyte primordium. After invagination with the ventral furrow, these primordial cells become located laterally to the stomodeum, and later differentiate into prohemocytes which migrate into the head. The cells are subsequently distributed throughout the body and differentiate into mature hemocytes, at which time srp expression is downregulated.

srp transcripts are detected throughout development on northern blots with the highest levels in 6-12hr embryos. In embryos, they are initially detected in four regions of the cellular blastoderm, the anterior and posterior midgut primordia, the primordium of the cephalic mesoderm, and the vitellophages. As gastrulation begins, transcripts are seen in the amnioserosa. During germ band extension, expression diminishes in the midgut but remains strong in the cephalic mesoderm. Later in embryogenesis, srp is expressed in the developing fat body. By stage 15, transcripts are observed exclusively in the fat body.

Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data

srp is a marker for all the hematopoietic cells of the lymph gland.

srp protein is first detected in fat cell precursors at embryonic stage 10, when it is expressed in a cluster of cells in the dorsal mesoderm of parasegment 13, and in segmentally repeated cell clusters in the lateral mesoderm of parasegments 4-9. At embryonic stages 11-12, additional expression is observed in segmentally repeated cell clusters in the ventral mesoderm of parasegments 3-11; these clusters are immediately posterior to the original clusters, and in the equivalent positions of parasegments 10-12.

srp is first detected in hemocyte precursor cells at embryonic stage 5, and is expressed in plasmatocytes through the end of embryogenesis.

Marker for
Subcellular Localization
CV Term
Evidence
References
is_active_in nucleus
inferred from direct assay
Expression Deduced from Reporters
Reporter: P{srp.Hemo-GAL4}
Stage
Tissue/Position (including subcellular localization)
Reference
Reporter: P{srpD-GAL4.C}
Stage
Tissue/Position (including subcellular localization)
Reference
Reporter: P{srp-Gal4}
Stage
Tissue/Position (including subcellular localization)
Reference
High-Throughput Expression Data
Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\srp in JBrowse
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyExpress - Embryonic expression images (BDGP data)
  • Stages(s) 1-3
  • Stages(s) 4-6
  • Stages(s) 7-8
  • Stages(s) 9-10
  • Stages(s) 11-12
  • Stages(s) 13-16
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 65 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 22 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of srp
Transgenic constructs containing regulatory region of srp
Aberrations (Deficiencies and Duplications) ( 29 )
Inferred from experimentation ( 29 )
Inferred from location ( 2 )
Variants
Variant Molecular Consequences
Alleles Representing Disease-Implicated Variants
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
Orthologs
Human Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Homo sapiens (Human) (8)
5 of 14
Yes
No
5 of 14
Yes
No
5 of 14
Yes
No
5 of 14
Yes
No
4 of 14
No
No
1  
4 of 14
No
No
3 of 14
No
Yes
2 of 14
No
No
1  
Model Organism Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Rattus norvegicus (Norway rat) (8)
4 of 14
Yes
No
4 of 14
Yes
No
4 of 14
Yes
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
Yes
2 of 14
No
No
2 of 14
No
Yes
Mus musculus (laboratory mouse) (8)
5 of 14
Yes
No
5 of 14
Yes
No
4 of 14
No
No
3 of 14
No
No
1  
3 of 14
No
No
3 of 14
No
No
3 of 14
No
Yes
3 of 14
No
Yes
Xenopus tropicalis (Western clawed frog) (13)
3 of 13
Yes
No
3 of 13
Yes
No
2 of 13
No
No
2 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
Yes
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
Yes
Danio rerio (Zebrafish) (10)
5 of 14
Yes
No
4 of 14
No
No
4 of 14
No
No
4 of 14
No
No
4 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
Yes
1 of 14
No
No
1 of 14
No
Yes
Caenorhabditis elegans (Nematode, roundworm) (12)
5 of 14
Yes
Yes
4 of 14
No
Yes
4 of 14
No
Yes
3 of 14
No
No
3 of 14
No
Yes
3 of 14
No
No
3 of 14
No
Yes
3 of 14
No
Yes
2 of 14
No
No
2 of 14
No
Yes
2 of 14
No
Yes
1 of 14
No
Yes
Anopheles gambiae (African malaria mosquito) (4)
6 of 12
Yes
Yes
Arabidopsis thaliana (thale-cress) (78)
2 of 13
Yes
No
2 of 13
Yes
Yes
2 of 13
Yes
Yes
2 of 13
Yes
Yes
2 of 13
Yes
Yes
2 of 13
Yes
Yes
2 of 13
Yes
Yes
2 of 13
Yes
Yes
2 of 13
Yes
No
2 of 13
Yes
No
2 of 13
Yes
No
2 of 13
Yes
No
2 of 13
Yes
Yes
2 of 13
Yes
Yes
2 of 13
Yes
Yes
2 of 13
Yes
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
No
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
Yes
Saccharomyces cerevisiae (Brewer's yeast) (9)
8 of 13
Yes
Yes
7 of 13
No
Yes
5 of 13
No
No
4 of 13
No
No
2 of 13
No
Yes
2 of 13
No
Yes
2 of 13
No
Yes
2 of 13
No
Yes
1 of 13
No
No
Schizosaccharomyces pombe (Fission yeast) (4)
6 of 12
Yes
No
5 of 12
No
Yes
4 of 12
No
No
1 of 12
No
No
Escherichia coli (enterobacterium) (0)
Other Organism Orthologs (via OrthoDB)
Data provided directly from OrthoDB:srp. Refer to their site for version information.
Paralogs
Paralogs (via DIOPT v9.1)
Drosophila melanogaster (Fruit fly) (4)
7 of 13
7 of 13
6 of 13
6 of 13
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 16 )
    Modifiers Based on Experimental Evidence ( 1 )
    Allele
    Disease
    Interaction
    References
    Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    Functional Complementation Data
    Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
    Interactions
    Summary of Physical Interactions
    Interaction Browsers

    Please see the Physical Interaction reports below for full details
    protein-protein
    Physical Interaction
    Assay
    References
    Summary of Genetic Interactions
    Interaction Browsers

    Please look at the allele data for full details of the genetic interactions
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    External Data
    Subunit Structure (UniProtKB)
    Interacts (via GATA-type Zn-finger domain) with Bfc; this interaction enhances srp binding to the promoter of crq/croquemort.
    (UniProt, P52172 )
    Linkouts
    BioGRID - A database of protein and genetic interactions.
    DroID - A comprehensive database of gene and protein interactions.
    MIST (genetic) - An integrated Molecular Interaction Database
    MIST (protein-protein) - An integrated Molecular Interaction Database
    Pathways
    Signaling Pathways (FlyBase)
    Metabolic Pathways
    FlyBase
    External Links
    External Data
    Class of Gene
    Genomic Location and Detailed Mapping Data
    Chromosome (arm)
    3R
    Recombination map
    3-58
    Cytogenetic map
    Sequence location
    FlyBase Computed Cytological Location
    Cytogenetic map
    Evidence for location
    89A11-89A12
    Limits computationally determined from genome sequence between P{PZ}blp01618 and P{PZ}gish04895&P{EP}EP3171
    Experimentally Determined Cytological Location
    Cytogenetic map
    Notes
    References
    89B1-89B3
    (determined by in situ hybridisation)
    89B-89B
    (determined by in situ hybridisation)
    89B1-89B22
    (determined by in situ hybridisation) 89B1--3 (determined by in situ hybridisation)
    Experimentally Determined Recombination Data
    Left of (cM)
    Right of (cM)
    Notes
    Stocks and Reagents
    Stocks (17)
    Genomic Clones (27)
    cDNA Clones (36)
     

    Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

    cDNA clones, fully sequenced
    BDGP DGC clones
    Other clones
      Drosophila Genomics Resource Center cDNA clones

      For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

      cDNA Clones, End Sequenced (ESTs)
      RNAi and Array Information
      Linkouts
      DRSC - Results frm RNAi screens
      Antibody Information
      Laboratory Generated Antibodies
      Commercially Available Antibodies
       
      Cell Line Information
      Publicly Available Cell Lines
       
        Other Stable Cell Lines
         
          Other Comments

          RNAi screen using dsRNA made from templates generated with primers directed against this gene results in aberrantly short spindles when assayed in S2 cells in the presence of Cdc27 dsRNA. This phenotype cannot be observed when the screen is performed without Cdc27 dsRNA.

          S2 cells treated with dsRNA generated against this gene show reduced phagocytosis of Candida albicans compared to untreated cells.

          dsRNA made from templates generated with primers directed against this gene.

          srp activates GATAe in a pathway that is responsible for the terminal differentiation of the endoderm.

          RNAi generated by PCR using primers directed to this gene causes a cell growth and viability phenotype when assayed in Kc167 and S2R+ cells.

          RNAi screen using dsRNA made from templates generated with primers directed against this gene causes a cell growth and viability phenotype when assayed in Kc167 and S2R+ cells.

          Misexpression of srp in the mesoderm induces the formation of ectopic fat cells and prevents the migration and coalescence of the somatic gonadal precursors. In addition, the differentiation of muscle cells is also affected; few somatic muscle precursors are specified and there is a loss of most somatic muscle fibres and the precursors of the visceral mesoderm and concomitantly the visceral muscle is absent.

          srp acts upstream of lz during embryonic and (probably) larval stages.

          srp is required for specific activation of the Fbp1 enhancer in the fat body.

          srp acts as a positive regulator of the CecA1 gene.

          srp is required zygotically for the migration of the germ cells through the posterior midgut wall.

          srp mutants exhibit gut development defects.

          srp promotes fat body development in the embryo, while abd-A allows gonadal mesoderm to develop by repressing srp function.

          There is a balance between fat body and somatic gonadal precursor (SGP) development with tin, wg and en driving cells in the primary clusters towards SGP development and srp driving them towards fat body development.

          hh is required for the normal activation of bap and srp in anterior portions of each parasegment, whereas wg is required to suppress bap and srp expression in posterior portions. hh and wg play opposing roles in mesoderm segmentation.

          A member of the ush-group of genes which are required for maintenance of the amnioserosa once it has differentiated.

          The autosomal "FLP-DFS" technique (using the P{ovoD1-18} P{FRT(whs)} P{hsFLP} chromosomes) has been used to study the zygotic lethal mutation.

          srp is required for the development of haemocytes. srp is essential for haematopoiesis and for the formation of the fat body.

          The multiple functions of srp suggest that it is an ortholog of the entire vertebrate Gata family. The previously described GATA factor Abf is the product of the gene srp.

          Identification: Identified in a yeast system as a target gene regulated by the bithorax complex proteins.

          In the yolk and in the amnioserosa srp function is required for proper gene expression and differentiation.

          srp embryos lack the endodermal midgut and instead form additional foregut tissue and duplicated hindgut.

          Molecular analysis of the srp gene demonstrates that it encodes a known transcription factor of the GATA family, srp, which has been cloned and sequenced previously.

          srp is expressed in the ovaries of adult flies where it produces an ovary specific protein isoform. The srp protein binds to a 12bp ovarian follicle cell-specific regulatory element located between the divergently transcribed Yp1 and Yp2. The 12bp element activates both in vivo and in vitro transcription of Yp1 and Yp2.

          srp acts as a homeotic gene downstream of the terminal gap gene hkb to promote morphogenesis and differentiation of anterior and posterior midgut.

          Identification: Identified as encoding a GATA family transcription factor that binds a conserved sequence element of the larval promoter of the Adh gene. The srp binding sites of the D.melanogaster and D.mulleri Adh larval promoters function as positive control elements.

          The expression pattern of srp suggests that it may play a role in the organogenesis of the fat body.

          srp mutants display the posterior end of the embryo on the dorsal side.

          Relationship to Other Genes
          Source for database merge of
          Additional comments
          Nomenclature History
          Source for database identify of
          Nomenclature comments
          Etymology
          Synonyms and Secondary IDs (22)
          Reported As
          Symbol Synonym
          Abf
          abf
          l(3)89B2
          l(3)neo45
          srp
          (Bischoff et al., 2025, Hemba-Waduge et al., 2025, Hur et al., 2025, Liu et al., 2025, Plygawko et al., 2025, Berg et al., 2024, Hof-Michel et al., 2024, Tsap et al., 2024, Zhang et al., 2024, Brooks et al., 2023, Chen et al., 2023, Clemente and Weavers, 2023, Floc'hlay et al., 2023, Voutyraki et al., 2023, Yang et al., 2023, Zane et al., 2023, Dalton et al., 2022, Saha et al., 2022, Wang et al., 2022, Wu et al., 2022, Gong et al., 2021, Moussalem et al., 2021, Parra-Peralbo et al., 2021, She et al., 2021, Winbush and Singh, 2021, Zheng et al., 2021, Ågren et al., 2020, Bjedov and Rallis, 2020, Cho et al., 2020, Keder et al., 2020, Kierdorf et al., 2020, Koranteng et al., 2020, Lepesant et al., 2020, Overton et al., 2020, Stathopoulos and Newcomb, 2020, Banerjee et al., 2019, Camus et al., 2019, FlyBase Genome Annotators, 2019-, Sanchez Bosch et al., 2019, Töpfer et al., 2019, Weavers et al., 2019, Wu et al., 2019, Abhyankar et al., 2018, Campbell et al., 2018, Franz et al., 2018, Hernández de Madrid and Casanova, 2018, Shlyakhover et al., 2018, Batut and Gingeras, 2017, Karaiskos et al., 2017, Liu et al., 2017, Matsubayashi et al., 2017, Nie et al., 2017, Zouaz et al., 2017, Fogarty et al., 2016, Mbodj et al., 2016, Oyallon et al., 2016, Sarov et al., 2016, Yue et al., 2016, Zheng et al., 2016, Doggett et al., 2015, Gold and Brückner, 2015, Morán et al., 2015, Schertel et al., 2015, Ugrankar et al., 2015, Zhao et al., 2015, Ashwal-Fluss et al., 2014, Evans et al., 2014, Faisal et al., 2014, Haye et al., 2014, Kuuluvainen et al., 2014, Rembold et al., 2014, Rhee et al., 2014, Shlyueva et al., 2014, Spahn et al., 2014, Combs and Eisen, 2013, Li and Gilmour, 2013, Telonis-Scott et al., 2013, Wang et al., 2013, Bánréti et al., 2012, Bras et al., 2012, Chen et al., 2012, Garcia et al., 2012, Kroeger et al., 2012, Tokusumi et al., 2012, Bantignies et al., 2011, Marcu et al., 2011, Narbonne-Reveau et al., 2011, Uddin et al., 2011, Urbano et al., 2011, Frise et al., 2010, Gobert et al., 2010, Kazemian et al., 2010, Renault et al., 2010, Siekhaus et al., 2010, Casper and Van Doren, 2009, Charroux and Royet, 2009, Kantorovitz et al., 2009, Vlisidou et al., 2009, Wolfstetter et al., 2009, Carrera et al., 2008, Cook et al., 2008.12.28, Das et al., 2008, DeFalco et al., 2008, Kwong et al., 2008, Pastor-Pareja et al., 2008, Stramer et al., 2008, Aerts et al., 2007, Down et al., 2007, Ferjoux et al., 2007, Gajewski et al., 2007, Hatton-Ellis et al., 2007, Lo et al., 2007, Muratoglu et al., 2007, Okumura et al., 2007, Sorrentino et al., 2007, Stroschein-Stevenson et al., 2006, Wood et al., 2006, Kocks et al., 2005, Stramer et al., 2005, Wawersik and Van, 2005, Miller et al., 2002)
          Name Synonyms
          A-box-binding factor
          Secondary FlyBase IDs
          • FBgn0010376
          • FBgn0010753
          • FBgn0011478
          Datasets (0)
          Study focus (0)
          Experimental Role
          Project
          Project Type
          Title
          Study result (0)
          Result
          Result Type
          Title
          External Crossreferences and Linkouts ( 75 )
          Sequence Crossreferences
          NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
          GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
          GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.
          UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information
          UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
          Other crossreferences
          AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.
          BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
          DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
          EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
          FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
          FlyMine - An integrated database for Drosophila genomics
          InterPro - A database of protein families, domains and functional sites
          KEGG Genes - Molecular building blocks of life in the genomic space.
          MARRVEL_MODEL - MARRVEL (model organism gene)
          Linkouts
          BioGRID - A database of protein and genetic interactions.
          Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
          DroID - A comprehensive database of gene and protein interactions.
          DRSC - Results frm RNAi screens
          Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
          FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
          FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
          Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
          Flygut - An atlas of the Drosophila adult midgut
          FlyMet - A comprehensive tissue-specific metabolomics resource for Drosophila.
          Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
          MIST (genetic) - An integrated Molecular Interaction Database
          MIST (protein-protein) - An integrated Molecular Interaction Database
          References (433)