E63-2, Eip63F-2
Please see the JBrowse view of Dmel\asRNA:Eig63F-2 for information on other features
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Antisense (in part): overlaps Eip63F-2 on opposite strand.
Gene model reviewed during 5.46
5' and 3' termini determined by primer extension (FBrf0083007)
Probable lncRNA gene; may encode small polypeptide(s).
Gene model reviewed during 5.56
1.2 (northern blot)
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\asRNA:Eig63F-2 using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
asRNA:Eig63F-2 transcripts are induced as a primary response to ecdysone. They are detected in early embryos and are induced to higher levels in late embryos. They have several brief periods of transcript accumulation in mid-first and mid-second instar larvae, in mid-prepupae, and in mid-pupae. asRNA:Eig63F-2 transcripts are also induced in staged larval salivary glands at around the time of the ecdysone pulse ~8hrs before puparium formation.
JBrowse - Visual display of RNA-Seq signals
View Dmel\asRNA:Eig63F-2 in JBrowse3-9
3-8.4
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Annotation CG32265 renamed CR32265 in release 5.1 of the genome annotation.
New annotation (CG32265) in release 3 of the genome annotation.
Null mutations in Eip63F-2 have no effect on development or fertility.
Eip63F-2 produces a single transcript of 1.25kb.
Molecular analysis of the 63F puff.
Random cDNAs from subtracted libraries subjected to a rapid and sensitive screen for their ability to detect mRNAs induced by ecdysone in the presence of cycloheximide identified the ecdysone inducible gene Eip63F-2.
Eip63F-2 gene product is induced in late larval salivary glands.
Source for identity of: Eig63F-2 Eip63F-2
Source for identity of: asRNA:Eig63F-2 Eig63F-2
Renamed from "Eip63F-2" to "Eig63F-2" to reflect its classification as a "non-protein-encoding gene" (i.e. its product is an RNA).
