FB2025_05 , released December 11, 2025
Gene: Dmel\Vang
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General Information
Symbol
Dmel\Vang
Species
D. melanogaster
Name
Van Gogh
Annotation Symbol
CG8075
Feature Type
FlyBase ID
FBgn0015838
Gene Model Status
Stock Availability
Gene Summary
Van Gogh (Vang) encodes a four-pass transmembrane protein that localizes to cell junctions. It is part of the Frizzled-dependent planar polarity pathway that establishes planar polarity in epithelia. It is also implicated in nervous system patterning. [Date last reviewed: 2019-03-21] (FlyBase Gene Snapshot)
Also Known As

stbm, strabismus, Vang/Stbm, stb, Van Gogh/Strabismus

Key Links
Genomic Location
Cytogenetic map
Sequence location
Recombination map
2-60
RefSeq locus
NT_033778 REGION:9103238..9106796
Sequence
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
Function
Gene Ontology (GO) Annotations (14 terms)
Molecular Function (2 terms)
Terms Based on Experimental Evidence (2 terms)
CV Term
Evidence
References
inferred from physical interaction with FLYBASE:fz; FB:FBgn0001085
inferred from physical interaction with UniProtKB:A1Z6W3
Terms Based on Predictions or Assertions (0 terms)
Biological Process (10 terms)
Terms Based on Experimental Evidence (9 terms)
CV Term
Evidence
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from genetic interaction with FLYBASE:dgo; FB:FBgn0086898
inferred from expression pattern
inferred from mutant phenotype
inferred from mutant phenotype
inferred from genetic interaction with FLYBASE:dgo; FB:FBgn0086898
inferred from mutant phenotype
inferred from genetic interaction with FLYBASE:DAAM; FB:FBgn0025641
inferred from mutant phenotype
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
Cellular Component (2 terms)
Terms Based on Experimental Evidence (1 term)
CV Term
Evidence
References
located_in plasma membrane
inferred from mutant phenotype
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
located_in membrane
inferred from electronic annotation with InterPro:IPR009539
is_active_in plasma membrane
inferred from biological aspect of ancestor with PANTHER:PTN001075071
Gene Group (FlyBase)
Protein Family (UniProt)
-
Protein Signatures (InterPro)
Summaries
Gene Snapshot
Van Gogh (Vang) encodes a four-pass transmembrane protein that localizes to cell junctions. It is part of the Frizzled-dependent planar polarity pathway that establishes planar polarity in epithelia. It is also implicated in nervous system patterning. [Date last reviewed: 2019-03-21]
Summary (Interactive Fly)

a four-pass transmembrane protein that localizes to cell junctions - part of the Frizzled-dependent planar polarity pathway that establishes planar polarity in epithelia - implicated in nervous system patterning - mutants show a disrupted orientation of ommatidia - Frizzled-induced Van Gogh phosphorylation by CK1epsilon promotes asymmetric localization of core PCP factors

Gene Model and Products
Number of Transcripts
2
Number of Unique Polypeptides
2

Please see the JBrowse view of Dmel\Vang for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Structure
Protein 3D structure   (Predicted by AlphaFold)   (AlphaFold entry A0A0B4KEN4)

If you don't see a structure in the viewer, refresh your browser.
Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures
Crossreferences
Comments on Gene Model

Stop-codon suppression (UGA) postulated; FBrf0216884

Gene model reviewed during 5.44

Gene model reviewed during 5.49

Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
FBtr0088566
3492
581
FBtr0330624
3492
608
Additional Transcript Data and Comments
Reported size (kB)

3.4 (longest cDNA)

Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
UniProt
RefSeq ID
GenBank
FBpp0087647
65.9
581
8.94
Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments
Reported size (kDa)
Comments
External Data
Crossreferences
InterPro - A database of protein families, domains and functional sites
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Vang using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Expression Data
Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.30

Transcript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
organism

Comment: maternally deposited

Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
distribution deduced from reporter or direct label
Stage
Tissue/Position (including subcellular localization)
Reference
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data

Vang protein is expressed in cells immediately dorsal to and ventral to the dorsal/ventral compartment boundary of the wing disc. No expression is observed in the haltere disc.

Marker for
 
Subcellular Localization
CV Term
Evidence
References
located_in plasma membrane
inferred from mutant phenotype
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\Vang in JBrowse
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 21 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 68 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of Vang
Transgenic constructs containing regulatory region of Vang
Aberrations (Deficiencies and Duplications) ( 2 )
Inferred from experimentation ( 2 )
Inferred from location ( 5 )
Variants
Variant Molecular Consequences
Alleles Representing Disease-Implicated Variants
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
macrochaeta & prothoracic segment
trichome & adult abdomen
trichome & adult abdomen, with Scer\GAL4αTub84B.PL
trichome & adult abdomen | somatic clone
trichome & adult abdomen | somatic clone, with Scer\GAL4αTub84B.PL
trichome & adult abdomen | somatic clone | cell non-autonomous
trichome & adult abdomen | somatic clone | cell non-autonomous, with Scer\GAL4αTub84B.PL
trichome & adult head
trichome & adult thorax
trichome & pleural membrane
trichome & pleural membrane | somatic clone
trichome & pleural membrane | somatic clone | cell non-autonomous
Orthologs
Human Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Homo sapiens (Human) (2)
14 of 14
Yes
Yes
1  
13 of 14
No
Yes
1  
Model Organism Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Rattus norvegicus (Norway rat) (2)
14 of 14
Yes
Yes
13 of 14
No
Yes
Mus musculus (laboratory mouse) (2)
13 of 14
Yes
Yes
12 of 14
No
Yes
Xenopus tropicalis (Western clawed frog) (3)
10 of 13
Yes
Yes
1 of 13
No
Yes
1 of 13
No
Yes
Danio rerio (Zebrafish) (2)
14 of 14
Yes
Yes
13 of 14
No
Yes
Caenorhabditis elegans (Nematode, roundworm) (1)
13 of 14
Yes
Yes
Anopheles gambiae (African malaria mosquito) (1)
12 of 12
Yes
Yes
Arabidopsis thaliana (thale-cress) (0)
Saccharomyces cerevisiae (Brewer's yeast) (0)
Schizosaccharomyces pombe (Fission yeast) (0)
Escherichia coli (enterobacterium) (0)
Other Organism Orthologs (via OrthoDB)
Data provided directly from OrthoDB:Vang. Refer to their site for version information.
Paralogs
Paralogs (via DIOPT v9.1)
Human Disease Associations
FlyBase Human Disease Model Reports
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 7 )
Potential Models Based on Orthology ( 0 )
Human Ortholog
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 1 )
Allele
Disease
Interaction
References
Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)
Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
Functional Complementation Data
Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
Interactions
Summary of Physical Interactions
Interaction Browsers

Please see the Physical Interaction reports below for full details
protein-protein
Physical Interaction
Assay
References
Summary of Genetic Interactions
Interaction Browsers

Please look at the allele data for full details of the genetic interactions
Starting gene(s)
Interaction type
Interacting gene(s)
Reference
Starting gene(s)
Interaction type
Interacting gene(s)
Reference
External Data
Linkouts
BioGRID - A database of protein and genetic interactions.
DroID - A comprehensive database of gene and protein interactions.
MIST (genetic) - An integrated Molecular Interaction Database
MIST (protein-protein) - An integrated Molecular Interaction Database
Pathways
Class of Gene
Genomic Location and Detailed Mapping Data
Chromosome (arm)
2R
Recombination map
2-60
Cytogenetic map
Sequence location
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
45A4-45A6
Limits computationally determined from genome sequence between P{lacW}l(2)45Aik00116&P{PZ}Su(var)2-1003697 and P{lacW}CG8788k04512&P{lacW}l(2)k13412k13412
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
45A-45B
(determined by in situ hybridisation)
Location is based on polytene analysis of X ray induced Vang alleles.
Experimentally Determined Recombination Data
Left of (cM)
Right of (cM)
Notes
Stocks and Reagents
Stocks (15)
Genomic Clones (14)
 

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (40)
 

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced
BDGP DGC clones
Other clones
Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

cDNA Clones, End Sequenced (ESTs)
RNAi and Array Information
Linkouts
DRSC - Results frm RNAi screens
Antibody Information
Laboratory Generated Antibodies
Commercially Available Antibodies
 
Cell Line Information
Publicly Available Cell Lines
 
    Other Stable Cell Lines
     
    • New stable cell line derived from S2R+-NPT005 : The S2R+-NPT005ΔDshΔStbmΔFz cell line was created containing large deletions in the dsh, Vang (also known as Stbm), and fz genes. The deletions were characterized as follows: dsh : 664 bp deletion of bp 65-728 (between the two gRNAs); Vang : 452 bp deletion of bp 284-735 (between the two gRNAs) on one chromosome, 5 bp deletion of bp 323-327 on another; fz : 532 bp deletion of bp 34-565 (between the two gRNAs).

    Other Comments

    During development of the bristle lineage, Vang protein is localised in an anterior crescent in dividing sensillum precursor cells and promotes the anterior localization raps protein.

    Vang acts together with fz and stan to mediate apicolateral recruitment of planar polarity proteins including dsh and pk. Vang has a role during planar polarity patterning.

    Vang requires pk and stan function to regulate tissue polarity in the eye.

    Genetic analysis is not consistent with fz-like class of genes fz, pk, Vang, stan and dsh acting simply as positive or negative regulators of in and fy.

    Mutations in fz-like class of genes fz, pk, Vang, stan and dsh act as strong enhancers of weak in or fy phenotypes. fz and Vang show complementary domineering nonautonomy in the wing and abdomen.

    The Vang gene product is essential for fz signalling. The Vang gene does not fall into the usual fz-like or in-like classification, defining a new type of tissue polarity gene. The Vang gene product acts cell nonautonomously.

    Flies homozygous for Vang alleles show a tissue polarity bristle phenotype on the wing, thorax, legs and abdomen. On the abdomen, bristles point almost orthogonally to the midline instead of posteriorly. Tarsal joints are often duplicated. Flies have rough eyes. Phenotypic data suggest that genetics of Vang and its interactions with pk are complex. Several, but not all, Vang alleles act as enhancers of the pk haploinsufficient tissue polarity phenotype, and the pkTBJ21 antimorphic phenotype. Mutations in pk can also act as suppressors of Vang dominant phenotypes.

    Vang is required to establish polarity in the eye, legs and bristles.

    Vang is involved in setting up polarity in the eye, legs and bristles. Mosaic analysis indicates Vang is required in all photoreceptors within an ommatidium to establish normal polarity of the ommatidium.

    The definition of strabismus is: a disorder in vision due to a deviation from normal orientation of one or both eyes (the medical term for cross-eyed).

    Relationship to Other Genes
    Source for database merge of

    Source for merge of: Vang stbm

    Additional comments
    Nomenclature History
    Source for database identify of
    Nomenclature comments
    Etymology

    "Vang" was named after the artist, van Gogh, because the swirling wing hair patterns in the mutants bring to mind the swirling brush strokes van Gogh used in some of his paintings.

    Synonyms and Secondary IDs (24)
    Reported As
    Symbol Synonym
    Vang
    (Humphries et al., 2023, Song et al., 2023, Koca et al., 2022, Payankaulam et al., 2022, Vuong and Mlodzik, 2022, Wang et al., 2022, Axelrod, 2020, Harrison et al., 2020, Hing et al., 2020, Humphries et al., 2020, Kessissoglou et al., 2020, Mlodzik, 2020, Weiner et al., 2020, Bonello and Peifer, 2019, Shadkhoo and Mani, 2019, Steinhauer et al., 2019, Garrido-Jimenez et al., 2018, Humphries and Mlodzik, 2018, Transgenic RNAi Project members, 2017-, Aigouy and Le Bivic, 2016, Carvajal-Gonzalez et al., 2016, Kelly et al., 2016, Schenkelaars et al., 2016, Yuan et al., 2016, Besson et al., 2015, Bouleau and Tricoire, 2015, Carvajal-Gonzalez et al., 2015, Galic and Matis, 2015, Gombos et al., 2015, Schweisguth, 2015, Yang and Mlodzik, 2015, Wang et al., 2014, Abley et al., 2013, Chin and Mlodzik, 2013, Ezan and Montcouquiol, 2013, Fischer et al., 2013, Hazelwood and Hancock, 2013, Lawrence and Casal, 2013, Lin and Katanaev, 2013, Matis and Axelrod, 2013, Wu et al., 2013, Zuo et al., 2013, Capilla et al., 2012, Förster and Luschnig, 2012, Muñoz-Soriano et al., 2012, Singh and Mlodzik, 2012, Weber et al., 2012, Axelrod and Tomlin, 2011, Cho et al., 2011, Goodrich and Strutt, 2011, Jungreis et al., 2011, Matsubara et al., 2011, Lu et al., 2010, McNeill, 2010, Pataki et al., 2010, Burak and Shraiman, 2009, Gomes et al., 2009, Steinel and Whitington, 2009, Chen et al., 2008, Doyle et al., 2008, Wu and Mlodzik, 2008, Chung et al., 2007, Lawrence et al., 2007, Humbert et al., 2006, Ren et al., 2006, Strutt and Strutt, 2005, Lawrence et al., 2004, He and Adler, 2002)
    stbm
    (Piscitello-Gómez et al., 2023, Ayukawa et al., 2022, Brittle et al., 2022, Strutt et al., 2019, Strutt et al., 2019, Thuveson et al., 2019, Ressurreição et al., 2018, Warrington et al., 2017, Strutt et al., 2016, Yang and Mlodzik, 2015, Merkel et al., 2014, Strutt et al., 2013, Strutt et al., 2013, Warrington et al., 2013, Gault et al., 2012, Muñoz-Soriano et al., 2012, Weber et al., 2012, Goodrich and Strutt, 2011, Jenny, 2011, Mirkovic et al., 2011, Mirkovic et al., 2011, Olguín et al., 2011, Shimizu et al., 2011, Djiane and Mlodzik, 2010, Harumoto et al., 2010, Chung et al., 2009, Courbard et al., 2009, Fetting et al., 2009, Simons et al., 2009, Dahmann et al., 2008, Doyle et al., 2008, Strutt and Strutt, 2008, Strutt and Warrington, 2008, Wu and Mlodzik, 2008, Bastock and Strutt, 2007, Fiehler and Wolff, 2007, König et al., 2007, Muñoz-Descalzo et al., 2007, Rawls et al., 2007, Strutt and Strutt, 2007, Wolff et al., 2007, Mirkovic and Mlodzik, 2006, Bastock and Strutt, 2005, Classen et al., 2005, Djiane et al., 2005, Fetting and Wolff, 2005, Jenny et al., 2005, Strutt and Strutt, 2005, Cho, 2004, Das et al., 2004, Fetting and Wolff, 2004, Guinto et al., 2004, Lecuit, 2004, Fiehler and Wolff, 2003, Jenny et al., 2003, Jenny et al., 2003, Lee et al., 2003, Rawls and Wolff, 2003, Cohen et al., 2002, Das et al., 2002, Guinto and Wolff, 2002, Lee and Adler, 2002, Mlodzik, 2002, Rawls et al., 2002, Schrecengost and Wolff, 2002, Strutt et al., 2002, Wedlich, 2002, Schrecengost and Wolff, 2001, Schrecengost and Wolff, 2001, Fanto, 2000, Fanto et al., 2000, Mlodzik, 2000, Boutros and Mlodzik, 1999, Mlodzik, 1999, Shulman et al., 1998, Wolff, 1998.1.22, Wolff and Rubin, 1998)
    stbm/vang
    strabismus/Van Gogh
    vangogh/strabismus
    Name Synonyms
    Sltrabismus
    van-gogh
    Secondary FlyBase IDs
    • FBgn0020780
    Datasets (0)
    Study focus (0)
    Experimental Role
    Project
    Project Type
    Title
    Study result (0)
    Result
    Result Type
    Title
    External Crossreferences and Linkouts ( 61 )
    Sequence Crossreferences
    NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
    GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
    GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
    RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
    UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.
    UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
    Other crossreferences
    AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.
    BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
    DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
    EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
    FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
    FlyMine - An integrated database for Drosophila genomics
    InterPro - A database of protein families, domains and functional sites
    KEGG Genes - Molecular building blocks of life in the genomic space.
    MARRVEL_MODEL - MARRVEL (model organism gene)
    Linkouts
    BioGRID - A database of protein and genetic interactions.
    Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
    DroID - A comprehensive database of gene and protein interactions.
    DRSC - Results frm RNAi screens
    Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
    FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
    FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
    Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
    Flygut - An atlas of the Drosophila adult midgut
    iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
    Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
    KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
    MIST (genetic) - An integrated Molecular Interaction Database
    MIST (protein-protein) - An integrated Molecular Interaction Database
    References (290)