FlyBase Gene Report: Dmel\ArfGAP1

General Information

Symbol

Dmel\ArfGAP1

Species

D. melanogaster

Name

ADP-ribosylation factor GTPase activating protein 1

Annotation Symbol

CG4237

Feature Type

protein_coding_gene

FlyBase ID

FBgn0020655

Gene Model Status

Current

Stock Availability

8 publicly available

Gene Snapshot

Contributions welcome

Other Summaries

Alliance
Auto summary
Gene Group
Interactive Fly

Also Known As

Gap69C, ARF1-GAP

Key Links

Genomic Location

Cytogenetic map

69B5-69B5

Sequence location

3L:12,415,026..12,417,580 [-]

Recombination map

3-38

RefSeq locus

NT_037436 REGION:12415026..12417580

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse GBrowse

Help me choose

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

GO Summary Ribbons

Gene Ontology (GO) Annotations (6 terms)

Molecular Function (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

enables GTPase activator activity

inferred from biological aspect of ancestor with PANTHER:PTN002924061

(assigned by GO_Central )

(Gaudet et al., 2011)

inferred from sequence model

(Bernards, 2003)

Biological Process (3 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

involved_in regulation of ARF protein signal transduction

inferred from genetic interaction with FLYBASE:garz; FB:FBgn0264560

(Armbruster and Luschnig, 2012)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

involved_in regulation of ARF protein signal transduction

inferred from biological aspect of ancestor with PANTHER:PTN002924061

(assigned by GO_Central )

(Gaudet et al., 2011)

involved_in regulation of endocytosis

inferred from biological aspect of ancestor with PANTHER:PTN002924061

(assigned by GO_Central )

(Gaudet et al., 2011)

involved_in regulation of GTPase activity

inferred from sequence model

(Bernards, 2003)

Cellular Component (2 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

located_in Golgi stack

inferred from genetic interaction with FLYBASE:garz; FB:FBgn0264560

(Armbruster and Luschnig, 2012)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

located_in Golgi membrane

inferred from biological aspect of ancestor with PANTHER:PTN002924061

(assigned by GO_Central )

(Gaudet et al., 2011)

Gene Group (FlyBase)

ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEINS

Protein Family (UniProt)

Protein Signatures (InterPro)

Summaries

Gene Group (FlyBase)

ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEINS -: ArfGAPs are GTPase activating proteins for ARF family GTPases. ARFGAPs contain a characteristic 130 amino acid module, the ArfGAP domain, originally defined as the minimal fragment possessing ArfGAP activity. (Adapted from FBrf0158741, PMID:15731001 and PMID:18809720).

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\ArfGAP1 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Comments on Gene Model

Gene model reviewed during 5.45

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

ArfGAP1-RA

FBtr0075981

NM_079316

2085

468

ArfGAP1-RB

FBtr0332088

NM_001274832

2025

448

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

ArfGAP1-PA

FBpp0075713

50.5

468

7.45

NP_524040

AAF49920

ArfGAP1-PB

FBpp0304398

48.4

448

7.94

NP_001261761

AGB94454

Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\ArfGAP1 using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

ArfGAP1_1

Linkouts

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

• membrane

(Aradska et al., 2015)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

located_in Golgi stack

inferred from genetic interaction with FLYBASE:garz; FB:FBgn0264560

(Armbruster and Luschnig, 2012)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\ArfGAP1 in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\ArfGAP1

View exonic expression by tissue for Dmel\ArfGAP1

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0020655

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG4237-RA

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG4237

Flygut - An atlas of the Drosophila adult midgut

FBgn0020655

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, and Transgenic Constructs

Classical and Insertion Alleles ( 4 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 7 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of ArfGAP1

Transgenic constructs containing regulatory region of ArfGAP1

Deletions and Duplications ( 0 )

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

partially lethal - majority die, with Scer\GAL4^pnr-MD237

ArfGAP1^GD11259

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

ArfGAP1^GD11259

viable, with Scer\GAL4^Mef2.PR

ArfGAP1^GD11259

viable, with Scer\GAL4^tin.CΔ4

ArfGAP1^GD11259

Other Phenotypes

Allele

some die during pupal stage, with Scer\GAL4^pnr-MD237

ArfGAP1^GD11259

visible, with Scer\GAL4^pnr-MD237

ArfGAP1^GD11259

Phenotype manifest in

Allele

cortical zone of lymph gland primary lobe | third instar larval stage, with Scer\GAL4^Hml.Δ

ArfGAP1^UAS.cRa

crystal cell | third instar larval stage, with Scer\GAL4^Hml.Δ

ArfGAP1^UAS.cRa

eye photoreceptor cell, with Scer\GAL4^GMR.PF

ArfGAP1^UAS.cRa

mesothoracic tergum, with Scer\GAL4^pnr-MD237

ArfGAP1^GD11259

plasmatocyte | third instar larval stage, with Scer\GAL4^Hml.Δ

ArfGAP1^UAS.cRa

posterior signalling center of lymph gland primary lobe | third instar larval stage, with Scer\GAL4^Hml.Δ

ArfGAP1^UAS.cRa

rhabdomere, with Scer\GAL4^GMR.PF

ArfGAP1^UAS.cRa

secondary lobe of embryonic/larval lymph gland | third instar larval stage, with Scer\GAL4^Hml.Δ

ArfGAP1^UAS.cRa

trichogen cell, with Scer\GAL4^pnr-MD237

ArfGAP1^GD11259

Orthologs

Downloads

Download All DIOPT Orthologs

Download All OrthoDB Orthologs

Human Orthologs (via DIOPT v8.0)

Homo sapiens (Human) (29)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Hsap\ARFGAP1

14 of 15

Yes

2 of 15

2 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Yes

Hsap\APPL2

1 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Model Organism Orthologs (via DIOPT v8.0)

Mus musculus (laboratory mouse) (28)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Mmus\Arfgap1

13 of 15

Yes

Mmus\Arfgap2

2 of 15

Mmus\Arfgap3

2 of 15

Mmus\9030624G23Rik

1 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

Yes

Mmus\Adap2

1 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Yes

Mmus\Appl2

1 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Yes

Mmus\Gm19924

1 of 15

Yes

Mmus\Smap1

1 of 15

Mmus\Smap2

1 of 15

Rattus norvegicus (Norway rat) (18)

Rnor\Arfgap1

10 of 13

Yes

2 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Yes

Rnor\Appl2

1 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Xenopus tropicalis (Western clawed frog) (21)

Xtro\arfgap1

8 of 12

Yes

2 of 12

1 of 12

1 of 12

1 of 12

1 of 12

Yes

Xtro\adap1

1 of 12

Yes

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

Yes

Xtro\appl2

1 of 12

Yes

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

Danio rerio (Zebrafish) (27)

Drer\arfgap1

5 of 15

Yes

2 of 15

2 of 15

1 of 15

1 of 15

1 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Yes

Drer\appl2

1 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Drer\si:ch211-168b3.1

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Yes

Drer\zgc:162872

1 of 15

Drer\zmp:0000000660

1 of 15

Caenorhabditis elegans (Nematode, roundworm) (8)

Cele\K02B12.7

12 of 15

Yes

2 of 15

1 of 15

1 of 15

1 of 15

Yes

Cele\F07F6.8

1 of 15

Yes

Cele\F23H11.4

1 of 15

Cele\git-1

1 of 15

Arabidopsis thaliana (thale-cress) (5)

Atha\AGD6

7 of 9

Yes

Atha\AGD7

7 of 9

Yes

Atha\AGD8

1 of 9

Atha\AGD9

1 of 9

Atha\RPA

1 of 9

Saccharomyces cerevisiae (Brewer's yeast) (6)

Scer\GCS1

10 of 15

Yes

Scer\SPS18

5 of 15

Yes

2 of 15

1 of 15

1 of 15

1 of 15

Schizosaccharomyces pombe (Fission yeast) (1)

Spom\SPCC622.14

8 of 12

Yes

Ortholog(s) in Drosophila Species (via OrthoDB v9.1) ( EOG0919093E )

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila suzukii

Spotted wing Drosophila

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA18052

Drosophila persimilis

Dper\GL24958

Drosophila willistoni

Dwil\GK20569

Drosophila virilis

Dvir\GJ13268

Drosophila mojavensis

Dmoj\GI12330

Drosophila grimshawi

Dgri\GH16066

Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG091506XL )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Musca domestica

House fly

Mdoa\17024886

Glossina morsitans

Tsetse fly

Gmor\GMOY010394

Lucilia cuprina

Australian sheep blowfly

Lcup\FF38_14174

Mayetiola destructor

Hessian fly

Mdes\Mdes001355

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL010834

Anopheles darlingi

American malaria mosquito

Adar\ADAC006397

Anopheles gambiae

Malaria mosquito

Agam\AGAP006462

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ008955

Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W09L6 )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Bombyx mori

Silkmoth

Bmor\BGIBMGA014112

Bombyx mori

Silkmoth

Bmor\BGIBMGA002030

Danaus plexippus

Monarch butterfly

Dple\DPOGS203926-PA

Heliconius melpomene

Postman butterfly

Hmel\HMEL013505

Apis florea

Little honeybee

Aflo\4399834708

Apis mellifera

Western honey bee

Amel\LOC411477

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP13356

Bombus terrestris

Buff-tailed bumblebee

Bter\15206526

Linepithema humile

Argentine ant

Lhum\LH22638

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:001ac9

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG014892

Dendroctonus ponderosae

Mountain pine beetle

Dpod\YQE_09998

Tribolium castaneum

Red flour beetle

Tcas\TC002406

Pediculus humanus

Human body louse

Phum\PHUM582440

Rhodnius prolixus

Kissing bug

Rpro\RPRC014502

Rhodnius prolixus

Kissing bug

Rpro\RPRC014500

Cimex lectularius

Bed bug

Clec\CLEC000352

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI004715

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_01093

Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X09H9 )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strigamia maritima

European centipede

Smar\SMAR012436

Stegodyphus mimosarum

African social velvet spider

Smim\KFM62052.1

Tetranychus urticae

Two-spotted spider mite

Turt\tetur17g02410

Tetranychus urticae

Two-spotted spider mite

Turt\tetur503g00010

Tetranychus urticae

Two-spotted spider mite

Turt\tetur17g01870

Tetranychus urticae

Two-spotted spider mite

Turt\tetur17g01980

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_212918

Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G0DQ3 )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strongylocentrotus purpuratus

Purple sea urchin

Spur\Sp-Arfgap1

Ciona intestinalis

Vase tunicate

Cint\LOC101243530

Ciona intestinalis

Vase tunicate

Cint\ENSCING00000014763

Gallus gallus

Domestic chicken

Ggal\ARFGAP1

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v8.0)

Drosophila melanogaster (Fruit fly) (8)

Gene Symbol

Score

Source

Alignment

3 of 10

2 of 10

2 of 10

2 of 10

2 of 10

2 of 10

Git

2 of 10

RhoGAP15B

1 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

ARFGAP1; ADP ribosylation factor GTPase activating protein 1

14 of 15

608377

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

ArfGAP1 - stumps

two hybrid

(Battersby et al., 2003)

Summary of Genetic Interactions

esyN Network Diagram

esyN Network Key:

Suppression

Enhancement

View in Interactions Browser

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

ArfGAP1

enhanceable

Cds

(Raghu et al., 2009)

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Cds

enhanceable

ArfGAP1

(Raghu et al., 2009)

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

64767

DroID - A comprehensive database of gene and protein interactions.

FBgn0020655

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

39417

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

External Data

Linkouts

KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.

Endocytosis

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

COPI-dependent Golgi-to-ER retrograde traffic

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

3-38

Cytogenetic map

69B5-69B5

Sequence location

3L:12,415,026..12,417,580 [-]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

69B5-69B5

Limits computationally determined from genome sequence between P{PZ}l(3)05088⁰⁵⁰⁸⁸ and P{PZ}l(3)06924⁰⁶⁹²⁴

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

69C-69C

(Frolov, 1997.6.27)

Experimentally Determined Recombination Data

Location

3-38

(FlyBase, 2016)

3-31.9

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (8)

Bloomington

81490

y¹ v¹; P{TKO.GS04820}attP40

63645

y¹ v¹; P{TRiP.HMJ30212}attP40

15676

y¹ w^67c23; P{EPgy2}ArfGAP1^EY03771

50584

y¹ sc^* v¹ sev²¹; P{TRiP.GLC01706}attP2

Kyoto

125053

w¹¹¹⁸; P{RS5}ArfGAP1^5-HA-1076

VDRC

v107069

P{KK102665}VIE-260B

v26459

w¹¹¹⁸ P{GD11259}v26459

v26460

w¹¹¹⁸; P{GD11259}v26460

Genomic Clones (23)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (134)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

RE63354

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0020655

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0020655

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

39417

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for identity of: Gap69C CG4237

(Bayraktaroglu, 1999.11)

Source for identity of: ArfGAP1 Gap69C

(FlyBase, 2009-)

Source for database merge of

Additional comments

FlyBase curator comment: Renamed from 'Gap69C' to 'ArfGAP1' because: i) 'ArfGAP1' is more specific and informative; ii) 'ArfGAP1' (or similar derivatives) is the only informative symbol ascribed to this gene in the literature; iii) OrthoDB agrees that the human ortholog is 'ARFGAP1'.

(FlyBase, 2009-)

Other Comments

dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R⁺ cell morphology.

(Kiger et al., 2003)

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 35 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

39417

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0020655

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

ArfGAP1_1

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG4237

Flygut - An atlas of the Drosophila adult midgut

FBgn0020655

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

39417

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG4237

modMine - A data warehouse for the modENCODE project

FBgn0020655

Linkouts

BioGRID - A database of protein and genetic interactions.

64767

DroID - A comprehensive database of gene and protein interactions.

FBgn0020655

DRSC - Results frm RNAi screens

FBgn0020655

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0020655

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG4237-RA

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0020655

FlyMine - An integrated database for Drosophila genomics

FBgn0020655

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

39417

KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.

Endocytosis

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

COPI-dependent Golgi-to-ER retrograde traffic

Synonyms and Secondary IDs (15)

Reported As

Symbol Synonym

AG1

(Schlacht et al., 2013)

ARF1-GAP

(Frolov, 1997.6.27)

ARF1GAP

(Khadilkar et al., 2014)

ArfGAP1

(Zeledon et al., 2019, Transgenic RNAi Project members, 2017-, Rodriguez-Fernandez and Dell'Angelica, 2015)

CG4237

(Zeledon et al., 2019, Ni et al., 2010.12.1, Gupta et al., 2009, Keleman et al., 2009.8.5, Perkins et al., 2009, Battersby et al., 2003)

GAP

(Khadilkar et al., 2014)

GAP69C

(Bernards, 2003)

Gap69C

(Van Bortle et al., 2015, Vaque et al., 2013, Armbruster and Luschnig, 2012, Japanese National Institute of Genetics, 2012.5.21, Von Ohlen et al., 2012, Raghu et al., 2009, Guo et al., 2008)

Gap69c

(Khadilkar et al., 2014)

arf1GAP

(Khadilkar et al., 2014)

dArf1-GAP

(Raghu et al., 2009)

gap69

(Gupta et al., 2009)

i51

(Battersby et al., 2003)

Name Synonyms

ADP-ribosylation factor GTPase activating protein 1

GTPase-activating protein 69C

Secondary FlyBase IDs

Datasets (0)

Study focus (0)

Experimental Role

Project

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Title

References (45)

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