FB2026_02 , released June 18, 2026
Gene: Dmel\Marf
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General Information
Symbol
Dmel\Marf
Species
D. melanogaster
Name
Mitochondrial assembly regulatory factor
Annotation Symbol
CG3869
Feature Type
FlyBase ID
FBgn0029870
Gene Model Status
Stock Availability
Gene Summary
Mitochondrial assembly regulatory factor (Marf) encodes a dynamin-family GTPase that mediates outer mitochondrial membrane tethering and fusion. Marf loss causes mitochondrial fragmentation and endoplasmic reticular stress that evoke skeletal muscle, retinal and heart tube dysfunction. [Date last reviewed: 2019-03-14] (FlyBase Gene Snapshot)
Also Known As

dMfn, Mfn, Mfn2, mitofusin

Key Links
Genomic Location
Cytogenetic map
Sequence location
Recombination map
1-16
RefSeq locus
NC_004354 REGION:6365949..6370924
Sequence
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
Function
Gene Ontology (GO) Annotations (17 terms)
Molecular Function (2 terms)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
enables GTP binding
inferred from electronic annotation with InterPro:IPR030381
inferred from sequence or structural similarity with UniProtKB:O18412
inferred from biological aspect of ancestor with PANTHER:PTN002573358
inferred from electronic annotation with InterPro:IPR006884, InterPro:IPR027094
Biological Process (12 terms)
Terms Based on Experimental Evidence (11 terms)
CV Term
Evidence
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
acts_upstream_of_negative_effect lymph gland crystal cell differentiation
inferred from mutant phenotype
inferred from genetic interaction with FLYBASE:asrij; FB:FBgn0034793
inferred from mutant phenotype
inferred from genetic interaction with FLYBASE:Trabd; FB:FBgn0283438
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
inferred from biological aspect of ancestor with PANTHER:PTN002573358
inferred from electronic annotation with InterPro:IPR006884
inferred from sequence or structural similarity with UniProtKB:O18412
inferred from biological aspect of ancestor with PANTHER:PTN002573358
Cellular Component (3 terms)
Terms Based on Experimental Evidence (1 term)
CV Term
Evidence
References
inferred from direct assay
Terms Based on Predictions or Assertions (3 terms)
CV Term
Evidence
References
located_in membrane
inferred from electronic annotation with InterPro:IPR006884
inferred from sequence or structural similarity with UniProtKB:O18412
inferred from biological aspect of ancestor with PANTHER:PTN002573358
inferred from electronic annotation with InterPro:IPR006884
Gene Group (FlyBase)
Protein Family (UniProt)
Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. Mitofusin subfamily. (Q7YU24)
Catalytic Activity (EC/Rhea)
GTPase activity
RHEA 19669:
Summaries
Gene Snapshot
Mitochondrial assembly regulatory factor (Marf) encodes a dynamin-family GTPase that mediates outer mitochondrial membrane tethering and fusion. Marf loss causes mitochondrial fragmentation and endoplasmic reticular stress that evoke skeletal muscle, retinal and heart tube dysfunction. [Date last reviewed: 2019-03-14]
Gene Group (FlyBase)
DYNAMIN-LIKE GTPASES -
The Dynamin-like GTPases are a family of GTPases that undergo nucleotide-dependent dimerization and dimer-dependent GTP hydrolysis. They are implicated in membrane remodelling and endocytic membrane fission events. (Adapted from PMID:22233676).
Protein Function (UniProtKB)
Mitochondrial outer membrane GTPase that mediates mitochondrial clustering and fusion (PubMed:18799731, PubMed:20869429, PubMed:22396657, PubMed:24192653, PubMed:26214738). Mitochondrial fusion is the physical merging of mitochondria that gives rise to mitochondrial networks, and this process is counterbalanced by mitochondrial fission which fragments networks (PubMed:20869429, PubMed:22396657, PubMed:24192653). Promotes, but is not required for park recruitment to dysfunctional mitochondria (PubMed:20194754).
(UniProt, Q7YU24)
Summary (Interactive Fly)

target of the Yorkie pathway - regulation of mitochondrial fusion, organ size, steroid synthesis in the ring gland and ovarian follicle cell differentiation - modulates endoplasmic reticulum function, Reaper binds Marf to induce mitochondrial fragmentation

Gene Model and Products
Number of Transcripts
3
Number of Unique Polypeptides
2

Please see the JBrowse view of Dmel\Marf for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Structure
Protein 3D structure   (Predicted by AlphaFold)   (AlphaFold entry Q7YU24)

If you don't see a structure in the viewer, refresh your browser.
Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures
Crossreferences
Comments on Gene Model

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.52

Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
FBtr0070909
3444
810
FBtr0070910
3605
810
FBtr0343373
3617
814
Additional Transcript Data and Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
UniProt
RefSeq ID
GenBank
FBpp0089222
91.4
810
6.69
FBpp0089221
91.4
810
6.69
FBpp0310030
91.8
814
6.69
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

810 aa isoforms: Marf-PB, Marf-PC
Additional Polypeptide Data and Comments
Reported size (kDa)
Comments
External Data
Subunit Structure (UniProtKB)

Interacts with Mul1.

(UniProt, Q7YU24)
Post Translational Modification

Ubiquitinated by park and Mul1 (PubMed:20194754, PubMed:24898855). Ubiquitinated, probably by HUWE1, when dietary stearate ( C18:0 ) levels are low; ubiquitination inhibits mitochondrial fusion (PubMed:26214738).

(UniProt, Q7YU24)
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Marf using the Feature Mapper tool.

External Data
Crossreferences
Linkouts
Expression Data
Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.61

Transcript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
organism | ubiquitous

Comment: maternally contributed

organism

Comment: zygotically expressed; pattern not described

northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
organism

Comment: expressed more strongly in males

Additional Descriptive Data

Maternally-expressed Marf transcript is present in early embryos, but has degraded before blastoderm stage. Zygotic expression begins at embryonic stage 8. By stage 11,expression is primarily observed in the invaginating midgut and in the mesoderm. During germ band retraction, expression is observed in the developing gut, with strong expression in the midgut. Expression is also observed in somatic muscle and in pharyngeal muscle. In adult females, Marf is expressed in nurse cells and oocytes, but not in follicle cells. In adult males, Marf is expressed in premeiotic spermaticytes, primary spermatocytes, and early-stage spermatids.

Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Evidence
References
inferred from direct assay
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\Marf in JBrowse
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 14 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 36 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of Marf
Transgenic constructs containing regulatory region of Marf
Aberrations (Deficiencies and Duplications) ( 2 )
Variants
Variant Molecular Consequences
Alleles Representing Disease-Implicated Variants
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
mitochondrion & dopaminergic neuron, with Scer\GAL4ple.PF
Orthologs
Human Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Homo sapiens (Human) (2)
13 of 14
Yes
Yes
 
5  
12 of 14
No
Yes
 
2  
Model Organism Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Rattus norvegicus (Norway rat) (2)
13 of 14
Yes
Yes
12 of 14
No
Yes
Mus musculus (laboratory mouse) (2)
13 of 14
Yes
Yes
11 of 14
No
Yes
Xenopus tropicalis (Western clawed frog) (3)
8 of 13
Yes
Yes
7 of 13
No
Yes
1 of 13
No
No
Danio rerio (Zebrafish) (6)
13 of 14
Yes
Yes
12 of 14
No
Yes
6 of 14
No
Yes
1 of 14
No
Yes
1 of 14
No
Yes
Caenorhabditis elegans (Nematode, roundworm) (1)
12 of 14
Yes
Yes
Anopheles gambiae (African malaria mosquito) (1)
11 of 12
Yes
Yes
Arabidopsis thaliana (thale-cress) (1)
2 of 13
Yes
No
Saccharomyces cerevisiae (Brewer's yeast) (1)
6 of 13
Yes
Yes
Schizosaccharomyces pombe (Fission yeast) (1)
5 of 12
Yes
No
Escherichia coli (enterobacterium) (0)
Other Organism Orthologs (via OrthoDB)
Data provided directly from OrthoDB:Marf. Refer to their site for version information.
Paralogs
Paralogs (via DIOPT v9.1)
Drosophila melanogaster (Fruit fly) (1)
7 of 13
Human Disease Associations
FlyBase Human Disease Model Reports
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 9 )
Potential Models Based on Orthology ( 4 )
Modifiers Based on Experimental Evidence ( 11 )
Allele
Disease
Interaction
References
Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)
Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
Functional Complementation Data
Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
Dmel gene
Ortholog showing functional complementation
Supporting References
Interactions
Summary of Physical Interactions
Summary of Genetic Interactions
Interaction Browsers

Please look at the allele data for full details of the genetic interactions
Starting gene(s)
Interaction type
Interacting gene(s)
Reference
Starting gene(s)
Interaction type
Interacting gene(s)
Reference
External Data
Subunit Structure (UniProtKB)
Interacts with Mul1.
(UniProt, Q7YU24 )
Linkouts
BioGRID - A database of protein and genetic interactions.
DroID - A comprehensive database of gene and protein interactions.
MIST (genetic) - An integrated Molecular Interaction Database
MIST (protein-protein) - An integrated Molecular Interaction Database
Pathways
Signaling Pathways (FlyBase)
Metabolic Pathways
FlyBase
External Links
External Data
Linkouts
KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.
Class of Gene
Genomic Location and Detailed Mapping Data
Chromosome (arm)
X
Recombination map
1-16
Cytogenetic map
Sequence location
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
5F4-5F4
Limits computationally determined from genome sequence between P{EP}EP1402&P{EP}CG15893EP1634 and P{EP}Ctr1AEP1364&P{EP}EP1445
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Stocks and Reagents
Stocks (18)
Genomic Clones (12)
 

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (133)
 

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced
BDGP DGC clones
Other clones
    Drosophila Genomics Resource Center cDNA clones

    For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

    cDNA Clones, End Sequenced (ESTs)
    RNAi and Array Information
    Linkouts
    DRSC - Results frm RNAi screens
    Antibody Information
    Laboratory Generated Antibodies
    Commercially Available Antibodies
     
    Cell Line Information
    Publicly Available Cell Lines
     
      Other Stable Cell Lines
       
        Other Comments

        Marf mutants exhibit lipid droplet accumulation in glia, but this does not lead to premature neurodegeneration.

        Relationship to Other Genes
        Source for database merge of

        Source for merge of: Marf anon-WO0125274.3

        Additional comments

        Source for identity of Marf CG3869 was sequence comparison ( date:020416 ).

        Source for merge of Marf anon-WO0125274.3 was sequence comparison ( date:051113 ).

        Nomenclature History
        Source for database identify of

        Source for identity of: Marf CG3869

        Nomenclature comments
        Etymology
        Synonyms and Secondary IDs (30)
        Reported As
        Symbol Synonym
        Marf
        (Gandara et al., 2026, Li et al., 2026, Couto-Lima et al., 2025, Gundberg and Nance, 2025, Guo et al., 2025, Matsuo et al., 2025, Murray-Cors et al., 2025, Zhang et al., 2025, Au et al., 2024, Lou et al., 2024, Sood et al., 2024, Taylor et al., 2024, Vedelek et al., 2024, Zhou et al., 2024, Campesan et al., 2023, Cheon et al., 2023, Maddison et al., 2023, Mauri et al., 2023, Nag et al., 2023, Nemtsova et al., 2023, Taslim et al., 2023, Ecovoiu et al., 2022, Huang et al., 2022, Katti et al., 2022, Petridi et al., 2022, Anoar et al., 2021, Avellaneda et al., 2021, Baek et al., 2021, Kim et al., 2021, Layalle et al., 2021, Lee et al., 2021, Manola et al., 2021, Pang et al., 2021, Pant et al., 2021, Tapia et al., 2021, Yamaguchi et al., 2021, Yamaguchi et al., 2021, Abtahi et al., 2020, Cerqueira et al., 2020, Cha et al., 2020, Chen et al., 2020, Couly et al., 2020, Garrido-Maraver et al., 2020, Graves et al., 2020, Kankel et al., 2020, Kitani-Morii and Noto, 2020, Li et al., 2020, Liu et al., 2020, Ponte et al., 2020, Xu et al., 2020, Forgiarini et al., 2019, Ge et al., 2019, Gumeni et al., 2019, Lieber et al., 2019, Meltzer et al., 2019, Metwally et al., 2019, Smith et al., 2019, Tsakiri et al., 2019, von Stockum et al., 2019, Yadav and Srikrishna, 2019, Zhou et al., 2019, Anding et al., 2018, Ding et al., 2018, El Fissi et al., 2018, Gene Disruption Project members, 2018-, Lee et al., 2018, Lee et al., 2018, Liu et al., 2018, Şentürk and Bellen, 2018, Shaltouki et al., 2018, Yamaguchi and Takashima, 2018, Bussmann and Storkebaum, 2017, Cao et al., 2017, Housden et al., 2017, Liu et al., 2017, Transgenic RNAi Project members, 2017-, Ugur et al., 2017, Altanbyek et al., 2016, Deng et al., 2016, Fowler and O'Sullivan, 2016, Kandul et al., 2016, Lee et al., 2016, Lee et al., 2016, Ugur et al., 2016, Wang et al., 2016, Zhang et al., 2016, Foriel et al., 2015, Liu et al., 2015, López Del Amo et al., 2015, Senyilmaz et al., 2015, Banerjee and Chinthapalli, 2014, Debattisti et al., 2014, Hwang et al., 2014, Luck et al., 2014, Pogson et al., 2014, Sandoval et al., 2014, Debattisti and Scorrano, 2013, Lee et al., 2013, Ratnaparkhi, 2013, Wu et al., 2013, Yamamoto et al., 2013-, Japanese National Institute of Genetics, 2012.5.21, Liu et al., 2012, Nagaraj et al., 2012, Schmidt et al., 2012, Boyd et al., 2011, Dorn et al., 2011, Sinenko et al., 2011, Sinenko et al., 2011, Thomenius et al., 2011, Liu and Lu, 2010, Ziviani et al., 2010, Deng et al., 2008, Bakal et al., 2007, Juhász et al., 2007)
        anon-WO0125274.3
        Name Synonyms
        Drosophila mitofusin
        Mitochondrial assembly regulatory factor
        mitochondria assembly regulatory factor
        mitochondrial assembly
        mitochondrial assembly regulatory factor
        mitofusin/MARF
        regulatory factor
        Secondary FlyBase IDs
        • FBgn0044368
        Datasets (0)
        Study focus (0)
        Experimental Role
        Project
        Project Type
        Title
        Study result (0)
        Result
        Result Type
        Title
        External Crossreferences and Linkouts ( 55 )
        Sequence Crossreferences
        NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
        GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
        GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.
        UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information
        Other crossreferences
        AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.
        DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
        EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
        FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
        FlyMine - An integrated database for Drosophila genomics
        KEGG Genes - Molecular building blocks of life in the genomic space.
        MARRVEL_MODEL - MARRVEL (model organism gene)
        Linkouts
        BioGRID - A database of protein and genetic interactions.
        Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
        DroID - A comprehensive database of gene and protein interactions.
        DRSC - Results frm RNAi screens
        FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
        FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
        Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
        Flygut - An atlas of the Drosophila adult midgut
        FlyMet - A comprehensive tissue-specific metabolomics resource for Drosophila.
        iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
        Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
        KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
        MIST (genetic) - An integrated Molecular Interaction Database
        MIST (protein-protein) - An integrated Molecular Interaction Database
        Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.
        References (281)