FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Gene: Dmel\βTub56D
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General Information
Symbol
Dmel\βTub56D
Species
D. melanogaster
Name
β-Tubulin at 56D
Annotation Symbol
CG9277
Feature Type
FlyBase ID
FBgn0284243
Gene Model Status
Stock Availability
Gene Summary
Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. (UniProt, Q24560)
Contribute a Gene Snapshot for this gene.
Also Known As

β-tubulin, β1-tubulin, β1, β1 tubulin, tubulin

Key Links
Genomic Location
Cytogenetic map
Sequence location
Recombination map
2-89
RefSeq locus
NT_033778 REGION:19447319..19451600
Sequence
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
Function
Gene Ontology (GO) Annotations (8 terms)
Molecular Function (3 terms)
Terms Based on Experimental Evidence (1 term)
CV Term
Evidence
References
Terms Based on Predictions or Assertions (3 terms)
CV Term
Evidence
References
enables GTP binding
inferred from biological aspect of ancestor with PANTHER:PTN000172598
inferred from electronic annotation with InterPro:IPR002453
inferred from biological aspect of ancestor with PANTHER:PTN000172598
inferred from electronic annotation with InterPro:IPR002453
Biological Process (3 terms)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (3 terms)
CV Term
Evidence
References
inferred from biological aspect of ancestor with PANTHER:PTN000172598
involved_in mitotic cell cycle
inferred from biological aspect of ancestor with PANTHER:PTN000172598
Cellular Component (3 terms)
Terms Based on Experimental Evidence (2 terms)
CV Term
Evidence
References
located_in cytoplasm
inferred from high throughput direct assay
located_in microtubule
inferred from direct assay
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
is_active_in cytoplasm
inferred from biological aspect of ancestor with PANTHER:PTN000172598
is_active_in microtubule
inferred from biological aspect of ancestor with PANTHER:PTN000172598
located_in microtubule
non-traceable author statement
Gene Group (FlyBase)
Protein Family (UniProt)
Belongs to the tubulin family. (Q24560)
Catalytic Activity (EC/Rhea)
GTPase activity
RHEA 19669:
Summaries
Gene Group (FlyBase)
BETA TUBULINS -
Tubulins are cytoskeletal proteins. α- and β-tubulin heterodimers polymerise to form microtubules, the roles of which include mechanical strength, intracellular trafficking and chromosome segregation. GTP molecules associated with β-tubulin molecules are hydrolyzed shortly after being incorporated into the polymerizing microtubules. GTP hydrolysis alters the conformation of the tubulin molecules and drives the dynamic behavior of microtubules. (Adapted from PMID:1121746 and PMID:25339962).
Protein Function (UniProtKB)
Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
(UniProt, Q24560)
Phenotypic Description (Red Book; Lindsley and Zimm 1992)
βTub56D (β1t)
A structural gene for β-tubulin. Its mRNA is maternally stored in the oocytes and expressed in the nurse cells and in early embryos (Natzle and McCarthy, 1984; Gasch et al., 1988); at this stage, the transcripts are evenly distributed throughout the embryo, but later in development they are concentrated in the primordia of the nervous system and their derivatives (the supra-oesophageal ganglion and ventral nerve cord) and in the visceral mesoderm. Since βTub56D is expressed throughout development and in all adult tissues (Rudolph et al., 1987), βTub56D tubulin is probably involved in all the microtubular structures necessary for cell division and cell shape (Raff et al., 1982; Biolojan et al., 1984). It is the major β-tubulin of adult flies in all structures except the testis.
Summary (Interactive Fly)

ß Tubulin56D - ubiquitious component of cytoskeleton

Gene Model and Products
Number of Transcripts
2
Number of Unique Polypeptides
2

Please see the JBrowse view of Dmel\βTub56D for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Structure
Protein 3D structure   (Predicted by AlphaFold)   (AlphaFold entry Q24560)

If you don't see a structure in the viewer, refresh your browser.
Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures
Crossreferences
PDB - An information portal to biological macromolecular structures
Comments on Gene Model

Gene model reviewed during 5.44

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.51

Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
FBtr0086537
1701
456
FBtr0086536
1596
447
Additional Transcript Data and Comments
Reported size (kB)

1.75 (northern blot)

Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
UniProt
RefSeq ID
GenBank
Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments
Reported size (kDa)

51, 48 (kD observed)

53 (kD observed)

Comments

The β tubulin βTub56D protein is shown to

interact with microtubule motor proteins as well as the α tubulin subunit by

chemical crosslinking. βTub56D and αTub84D form a complex of 106 or

101 kD, βTub56D and ncd form a complex of 95 kD while βTub56D and

Khc form a complex of 82 kD.

External Data
Subunit Structure (UniProtKB)

Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells. Interacts with mgr and Vhl.

(UniProt, Q24560)
Linkouts
Sequences Consistent with the Gene Model
Nucleotide / Polypeptide Records
 
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\βTub56D using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Expression Data
Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.50

Transcript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
organism

Comment: maternally deposited

northern blot
Stage
Tissue/Position (including subcellular localization)
Reference

Comment: reference states 0-21 hr AEL

radioisotope in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
western blot
Stage
Tissue/Position (including subcellular localization)
Reference

Comment: reference states 0-19 hr AEL

Additional Descriptive Data

localization of acetylated or glutamylated tubulin detected; found only in stabilized microtubules.

Highest levels of βTub56D protein are detected at 26-96 hours of pupation.

Marker for
Subcellular Localization
CV Term
Evidence
References
located_in cytoplasm
inferred from high throughput direct assay
located_in microtubule
inferred from direct assay
Expression Deduced from Reporters
Reporter: P{β1WHI}
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Reporter: P{lacZβTub56D.NC}
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
Stage
Tissue/Position (including subcellular localization)
Reference
High-Throughput Expression Data
Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\βTub56D in JBrowse
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Images
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 26 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 17 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of βTub56D
Transgenic constructs containing regulatory region of βTub56D
Aberrations (Deficiencies and Duplications) ( 4 )
Variants
Variant Molecular Consequences
Alleles Representing Disease-Implicated Variants
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
Orthologs
Human Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Homo sapiens (Human) (24)
13 of 14
Yes
Yes
10 of 14
No
Yes
1  
10 of 14
No
Yes
1  
10 of 14
No
Yes
1  
8 of 14
No
No
1  
8 of 14
No
Yes
8 of 14
No
Yes
8 of 14
No
No
7 of 14
No
No
6 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
1  
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
Yes
2 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
1  
1 of 14
No
Yes
Model Organism Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Rattus norvegicus (Norway rat) (17)
13 of 14
Yes
Yes
10 of 14
No
Yes
10 of 14
No
Yes
9 of 14
No
Yes
9 of 14
No
Yes
8 of 14
No
Yes
8 of 14
No
Yes
6 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
Mus musculus (laboratory mouse) (20)
13 of 14
Yes
Yes
10 of 14
No
Yes
10 of 14
No
Yes
10 of 14
No
Yes
9 of 14
No
Yes
8 of 14
No
Yes
8 of 14
No
Yes
5 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
Yes
2 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
Xenopus tropicalis (Western clawed frog) (16)
10 of 13
Yes
Yes
9 of 13
No
Yes
7 of 13
No
Yes
7 of 13
No
Yes
7 of 13
No
Yes
6 of 13
No
No
6 of 13
No
Yes
3 of 13
No
Yes
1 of 13
No
Yes
1 of 13
No
No
1 of 13
No
Yes
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
Yes
1 of 13
No
Yes
Danio rerio (Zebrafish) (23)
12 of 14
Yes
Yes
12 of 14
Yes
Yes
11 of 14
No
Yes
11 of 14
No
Yes
10 of 14
No
Yes
10 of 14
No
Yes
7 of 14
No
Yes
7 of 14
No
No
7 of 14
No
Yes
3 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
2 of 14
No
Yes
2 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
Caenorhabditis elegans (Nematode, roundworm) (17)
13 of 14
Yes
Yes
8 of 14
No
Yes
8 of 14
No
No
8 of 14
No
Yes
8 of 14
No
Yes
5 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
1 of 14
No
No
1 of 14
No
No
Anopheles gambiae (African malaria mosquito) (12)
12 of 12
Yes
Yes
Arabidopsis thaliana (thale-cress) (17)
13 of 13
Yes
Yes
13 of 13
Yes
Yes
12 of 13
No
No
12 of 13
No
No
12 of 13
No
No
12 of 13
No
Yes
12 of 13
No
Yes
12 of 13
No
No
12 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
Saccharomyces cerevisiae (Brewer's yeast) (4)
13 of 13
Yes
Yes
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
Schizosaccharomyces pombe (Fission yeast) (4)
12 of 12
Yes
Yes
2 of 12
No
No
1 of 12
No
No
1 of 12
No
No
Escherichia coli (enterobacterium) (0)
Other Organism Orthologs (via OrthoDB)
Data provided directly from OrthoDB:βTub56D. Refer to their site for version information.
Paralogs
Paralogs (via DIOPT v9.1)
Drosophila melanogaster (Fruit fly) (11)
12 of 13
11 of 13
10 of 13
5 of 13
4 of 13
4 of 13
4 of 13
4 of 13
4 of 13
4 of 13
3 of 13
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 9 )
    Modifiers Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Interaction
    References
    Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    Functional Complementation Data
    Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
    Interactions
    Summary of Physical Interactions
    Interaction Browsers

    Please see the Physical Interaction reports below for full details
    RNA-protein
    Physical Interaction
    Assay
    References
    protein-protein
    Physical Interaction
    Assay
    References
    Summary of Genetic Interactions
    Interaction Browsers

    Please look at the allele data for full details of the genetic interactions
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    External Data
    Subunit Structure (UniProtKB)
    Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells. Interacts with mgr and Vhl.
    (UniProt, Q24560 )
    Linkouts
    MIST (genetic) - An integrated Molecular Interaction Database
    MIST (protein-protein) - An integrated Molecular Interaction Database
    Pathways
    Signaling Pathways (FlyBase)
    Metabolic Pathways
    FlyBase
    External Links
    External Data
    Linkouts
    KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
    Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.
    Class of Gene
    Genomic Location and Detailed Mapping Data
    Chromosome (arm)
    2R
    Recombination map
    2-89
    Cytogenetic map
    Sequence location
    FlyBase Computed Cytological Location
    Cytogenetic map
    Evidence for location
    56D7-56D8
    Limits computationally determined from genome sequence between P{lacW}htsk06121 and P{lacW}l(2)k00705k00705&P{lacW}mei-W68k05603
    Experimentally Determined Cytological Location
    Cytogenetic map
    Notes
    References
    56D7-56D9
    (determined by in situ hybridisation)
    56D10-56D12
    56D10--14 56D5--6 56D7--10 56D7--9 56D8--11 56D8--9
    56D-56D
    (determined by in situ hybridisation)
    56C-56C
    (determined by in situ hybridisation)
    Experimentally Determined Recombination Data
    Right of (cM)
    Notes
    Stocks and Reagents
    Stocks (21)
    Genomic Clones (18)
     

    Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

    cDNA Clones (740)
     

    Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

    cDNA clones, fully sequenced
    BDGP DGC clones
    Other clones
    Drosophila Genomics Resource Center cDNA clones

    For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

      cDNA Clones, End Sequenced (ESTs)
      Other clones
      RNAi and Array Information
      Linkouts
      Antibody Information
      Laboratory Generated Antibodies
      Commercially Available Antibodies
       
      Developmental Studies Hybridoma Bank - Monoclonal antibodies for use in research
      Cell Line Information
      Publicly Available Cell Lines
       
        Other Stable Cell Lines
         
          Other Comments

          Host gene for maternally inherited stable intronic sequence RNA (sisRNA).

          Candidate stable intronic sequence RNA (sisRNA) identified within 5'UTR of this gene.

          Mutants isolated in a screen of the second chromosome identifying genes affecting disc morphology.

          Insertion of a myotube into the epidermis is a prerequisite for the induction of βTub56D transcription; muscle loss (e.g. in rost and insc mutants) abolishes βTub56D transcription in the corresponding apodemes.

          Analysis of βTub56D regulatory elements using Ecol\lacZ reporter gene expression.

          Ecol\lacZ reporter gene constructs have identified three separate elements localised either far upstream, either promoter proximal or within the intron of βTub56D necessary for the full level of βTub56D gene expression.

          Mixtures of ncd or Khc motor domain treated with the zero-length cross linker EDC generates covalently cross linked products of ncd or Khc with βTub56D and ncd or Khc with αTub84B. These results indicate that kinesin family motors of opposite polarity interact with both βTub56D and αTub84B and support a model in which some portion of each ncd or Khc proteins motor domain overlaps adjacent βTub56D and αTub84B subunits.

          Gene contains an RNA polymerase II complex which pauses after synthesis of a short transcript. In vivo ultraviolet crosslinking techniques demonstrate phosphorylation of the carboxy terminal domain (CTD) of the large subunit of RNA polymerase II could either regulate the transition of polymerase from a paused to an elongated complex or be a consequence of the transition from paused to elongated.

          A fragment of the D.melanogaster βTub56D gene has been used as a probe for in situ hybridisation of Chrysomya rufifacies polytene chromosomes.

          Splicing of βTub56D RNA has been studied in B5228 mutant embryos.

          The large intron 1 of βTub56D is conserved with β3 tubulin genes. The regulatory regions responsible for expression of βTub56D in somatic cells of the testis are located in the single large intron positioned between the codons of amino acids 19 and 20. Transcription of βTub56D in germ cells is dependent on upstream sequences, deletion analysis demonstrates a short promoter-proximal fragment is responsible.

          βTub56D-lacZ fusions were used to study the expression of βTub56D in muscle attachment sites. Promoter/intron deletion analysis identified a classic 14bp enhancer present in the βTub56D intron in 3 copies: no cooperativity of effect on expression is evident for the enhancer. Expression of βTub56D begins as the muscles make contact with the muscle attachment sites.

          Ecol\lacZ reporter gene constructs demonstrate that transcription of βTub56D starts shortly after the action of genes which participate in the decision of epidermal versus neural cell fate. Expression is regulated by independent, cell-type specific enhancers in the intron for the PNS and apodemes, while maternal and CNS expression is directed by cooperation between upstream promoter elements and corresponding enhancers in the intron.

          The distribution of βTub56D, βTub60D and βTub85D proteins in the testes has been analysed.

          The degree of homology between βTub85D and βTub56D is high.

          Tubulins are the main structural components of microtubules in mitotic and meiotic spindles, cilia, flagella, neural processes and the cytoskeleton; nontubulin proteins (MAPS or microtubule-associated proteins) are involved along with tubulins in the formation of specialized microtubules (Theurkauf, Baum, Bo and Wensink, 1986; Rudolph, Kimble, Hoyle, Subler and Raff, 1987). Tubulin proteins are found in a wide variety of species from unicellular organisms to man; their biochemical and molecular structure is highly conserved. The α- and β-subunits from different organisms can be combined in vitro into hybrid microtubule structures and there is a high level of primary amino acid sequence identity in the proteins (Sanchez, Natzle, Cleveland, Kirschner and McCarthy, 1980; Raff, 1984). In D.melanogaster, two multigene families, each made up of four members, code for α- and β-tubulins, each tubulin subunit being a 55,000 dalton polypeptide. The tubulin genes in each multigene family are dispersed in the second and/or third chromosomes rather than arranged in clusters. βTub56D is a structural gene for β-tubulin. Its mRNA is maternally stored in the oocytes and expressed in the nurse cells and in early embryos (Natzle and McCarthy, 1984; Gasch, Hinz, Leiss and Renkawitz-Pohl, 1988); at this stage, the transcripts are evenly distributed throughout the embryo, but later in development they are concentrated in the primordia of the nervous system and their derivatives (the supra-oesophageal ganglion and ventral nerve cord) and in the visceral mesoderm. Since βTub56D is expressed throughout development and in all adult tissues (Rudolph, Kimble, Hoyle, Subler and Raff, 1987), βTub56D tubulin is probably involved in all the microtubular structures necessary for cell division and cell shape (Raff, Fuller, Kaufman, Kemphues, Rudolph and Raff, 1982; Biolojan et al., 1984). It is the major β-tubulin of adult flies in all structures except the testis.

          Relationship to Other Genes
          Source for database merge of

          Source for merge of: βTub56D l(2)k00705

          Additional comments
          Nomenclature History
          Source for database identify of

          Source for identity of: βTub56D CG9277

          Nomenclature comments
          Etymology
          Synonyms and Secondary IDs (67)
          Reported As
          Symbol Synonym
          A1ZBL0_DROME
          BetaTub56D
          l(2)k00705
          β56D
          β1 tubulin
          β1-tubulin
          βTub1
          Name Synonyms
          Beta tubulin
          TUBULIN B-1 CHAIN
          Tubulin β-1 chain
          Tubulin β1-chain
          b-tubulin56D
          beta tubulin
          beta-1 tubulin
          beta-1-tubulin
          beta-Tubulin 56D
          beta-Tubulin at 56 D
          beta-tubulin 56D
          lethal (2) k00705
          β-Tubulin at 56D
          β-tubulin-56D
          β1-Tubulin
          βTubulin
          Secondary FlyBase IDs
          • FBgn0003887
          • FBgn0022261
          Datasets (0)
          Study focus (0)
          Experimental Role
          Project
          Project Type
          Title
          Study result (0)
          Result
          Result Type
          Title
          External Crossreferences and Linkouts ( 65 )
          Sequence Crossreferences
          NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
          GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
          GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.
          UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information
          UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
          Other crossreferences
          AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.
          DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
          EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
          FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
          KEGG Genes - Molecular building blocks of life in the genomic space.
          MARRVEL_MODEL - MARRVEL (model organism gene)
          PDB - An information portal to biological macromolecular structures
          Linkouts
          Developmental Studies Hybridoma Bank - Monoclonal antibodies for use in research
          Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
          FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
          FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
          Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
          iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
          Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
          KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
          MIST (genetic) - An integrated Molecular Interaction Database
          MIST (protein-protein) - An integrated Molecular Interaction Database
          Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.
          References (330)