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General Information
Symbol
Dmel\Dmel:r6:3R:21324226:21334527:-
Species
D. melanogaster
Feature type
FlyBase ID
FBsf0000101504
Collection
Associated gene
Genomic Location
Chromosome (arm)
3R
Sequence location

3R:21,324,226..21,334,527 [-]

Sequence Data
Length
Comments

Corresponds to splice annotated at GT-AT.

AT..AC

Associated Information
Gene(s) (targeted or local)
Allele(s)
    Transcripts(s)
      Polypeptide(s)
        Construct
          Experimental Data
          RNA-Seq Read Counts
          Dataset: BCM_1_RNAseq_junctions
          Expression stage(s)
          Read Count
          embryonic stage 4 -- 9

          Comment: 2-4 hr

          0
          embryonic stage 4 -- 16

          Comment: 2-16 hr

          0
          embryonic stage 4 -- 16

          Comment: 2-16 hr

          0
          embryonic stage 16

          Comment: 14-16 hr

          1
          second instar larval stage -- third instar larval stage

          Comment: 48 to 120 hrs post egg-lay

          0
          pupal stage

          Comment: aged 1 to 5 days after collection as third instar larvae

          12
          pupal stage P6 -- pharate adult stage P10

          Comment: aged 72 hrs after collection as third instar larvae

          0
          adult stage

          Comment: aged 17 days post-eclosion

          0
          adult stage | female

          Comment: aged 2-3 days post-eclosion

          0
          adult stage | male

          Comment: aged 2-3 days post-eclosion

          0

          Total
          19
          Collection Information
          Collection: BCM_1_RNAseq_junctions
          Title
          Exon junction identification from RNA-Seq assays of D. melanogaster, Canton-S strain, 10 developmental stages.
          Source and Progenitors
          Species of derivation
          D. melanogaster
          Strain of derivation
          Stage
          Tissue/Position (including subcellular localization)
          Reference
          organism

          Comment: aged 1 to 5 days after collection as third instar larvae

          organism

          Comment: aged 72 hrs after collection as third instar larvae

          organism

          Comment: aged 2-3 days post-eclosion

          organism

          Comment: aged 17 days post-eclosion

          organism

          Comment: aged 2-3 days post-eclosion

          Vector of progenitor construct
          Description

          Umbrella record for 12 collections that differ by developmental stage, from embryos to aged adults. RNA junctions identified and characterized (presented in GBrowse and in RNA junction reports).

          Additional data
          Sample preparation
          Collection preparation
          Mode of assay
          Data analysis
          Cell lines
          Observed in
          Not observed in
          Comments

          Matches FlyBase Annotated Junction.

          Stocks (0)
          External Crossreferences and Linkouts ( 0 )
          Synonyms and Secondary IDs (3)
          Reported As
          Symbol Synonym
          3R:17149948-17160248
          Dmel:r5:3R:17149948:17160249:-
          Dmel:r6:3R:21324226:21334527:-
          Secondary FlyBase IDs
            References (3)