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General Information
Symbol
Dmel\TFBS_cad_008369
Species
D. melanogaster
Feature type
FlyBase ID
FBsf0000249354
Collection
Associated gene
Genomic Location
Chromosome (arm)
3R
Sequence location

3R:27,169,780..27,170,907

Sequence Data
Length
1128
Comments
Associated Information
Gene(s) (targeted or local)
    Allele(s)
      Transcripts(s)
        Polypeptide(s)
          Construct
            Experimental Data
            Binding data
            Bound moiety
            cad protein
            Comments on moiety
            Mapped to restriction fragment
            Evidence or Assay
            Collection Information
            Collection: mE1_TFBS_cad
            Symbol
            Title
            cad binding sites (peak calls) identified by ChIP-chip and ChIP-Seq in embryos.
            Source and Progenitors
            Species of derivation
            D. melanogaster
            Strain of derivation
            Stage
            Tissue/Position (including subcellular localization)
            Reference
            Vector of progenitor construct
            Description

            Genomic sequences identified as cad transcription factor binding sites; chromatin immunoprecipitation using an antibody against the cad protein, or, using an antibody to GFP that recognizes transgenic, GFP-tagged cad protein; DNA sequences identified by genomic tiling array; an integrative analysis of multiple ChIP data sets.

            Additional data
            Sample preparation
            Collection preparation
            Mode of assay
            Data analysis

            Peaks from multiple embryonic ChIP data sets were merged and the union was taken.

            Cell lines
            Observed in
            Not observed in
            Comments
            Stocks (0)
            External Crossreferences and Linkouts ( 0 )
            Synonyms and Secondary IDs (1)
            Reported As
            Symbol Synonym
            TFBS_cad_008369
            Secondary FlyBase IDs
              References (2)