Cytology	Observed or estimated sequence coordinates	Symbol	Stocks


*Genes (mapped to the sequence)* [Export into hitlist]
84D1-84D2,84C-84D,84C-84D,84D1-84D14,84C-84D,84D1-84D14,84D-84D	3R:7186994..7200941	lap	16 stocks
84D2-84D2	3R:7200970..7203450	CG14609	3 stocks
84D2-84D2	3R:7206652..7208431	CG1288	3 stocks
84D2-84D2	3R:7214339..7217083	CG14606	7 stocks
84D2-84D2	3R:7217679..7219705	CG14605	5 stocks
84D2-84D3	3R:7224414..7241138	thw	3 stocks

*Genes (mapped, but not to the sequence)* [Export into hitlist]
81-100	3R:3461351..32068446	cant	2 stocks
81-100	3R:3461351..32068446	l(3)cl-R3	2 stocks
84C-84D	3R:7097477..7760098	l(3)S060313
84D-84E	3R:7174723..8130321	l(3)ry60
84D-84E	3R:7174723..8130321	e(Pc)84DE	FBst0004505
84D-84D	3R:7174723..7760098	l(3)S007403a
84D-84D	3R:7174723..7760098	l(3)S005028
84D1-84D7	3R:7174723..7467933	l(3)S145110
84D1-84D5	3R:7174723..7398630	l(3)S121910b
84D1-84D4	3R:7174723..7336075	l(3)S127416

*Insertions (cytology mapped)* [Export into hitlist]
84-85	3R:6625559..10201762	P{W5}84
84-84	3R:6625559..8383247	P{3.8S-Y}34
84D-84E	3R:7174723..8130321	P{418}e(Pc)84DE[T66.1]	FBst0004505
84D-84E	3R:7174723..8130321	P{FRT(w[hs])}75A	2 stocks
84D-84E	3R:7174723..8130321	P{FRT(w[hs])}ZQa2
84D-84D	3R:7174723..7760098	P{GawB}078Y	FBst0030821
84D-84D	3R:7174723..7760098	P{lacW}S097301a
84D-84D	3R:7174723..7760098	P{lacW}l(3)S007403a[S007403a]
84D-84D	3R:7174723..7760098	P{hsp26-lacZ}84D
84D-84D	3R:7174723..7760098	P{Mcp-w#11}102
84D1--84D7	3R:7174723..7467933	P{lacW}l(3)S145110[S145110]
84D1--84D5	3R:7174723..7398630	P{lacW}l(3)S121910b[S121910b]
84D1--84D4	3R:7174723..7336075	P{lacW}l(3)S127416[S127416]

*Insertions (sequence mapped)* [Export into hitlist]
84D2_r5	3R:7193350..7194350	PBac{SAstopDsRed}LL04741	FBst0319530
84D2	3R:7199683..7199683	PBac{RB}lap[e03734]
84D2	3R:7200698..7200698	Mi{ET1}lap[MB09294]	FBst0026463
84D2	3R:7204707..7204707	Mi{ET1}MB01835	FBst0023370
84D2	3R:7208454..7208454	Mi{MIC}MI11020	FBst0056110
84D2	3R:7211797..7211797	PBac{WH}f00935
84D2	3R:7214395..7214395	PBac{WH}CG14606[f02996]	FBst0086078
84D2	3R:7219318..7219318	Mi{MIC}CG14605[MI06791]	FBst0041109
84D2	3R:7219671..7219671	Mi{ET1}CG14605[MB08700]	FBst0026399

*Deleted segments (sequence mapped)* [Export into hitlist]
84A5--84D9	3R:6754194..7887045	Df(3R)Antp17	2 stocks
84B4--84E11	3R:7090527..8094083	Df(3R)ED7665	2 stocks
84C1--84D2	3R:7107767..7211797	Df(3R)BSC221	FBst0009698
84C4--84E11	3R:7128282..8094083	Df(3R)ED5221	3 stocks
84C8--84D9	3R:7162687..7491597	Df(3R)Exel6146	FBst0007625
84C8--84D3	3R:7162696..7246853	Df(3R)BSC548	FBst0025076

*Duplicated segments (sequence mapped)* [Export into hitlist]
84B6-84D2	3R:7093134..7203497	Dp(3;2)GV-CH321-80J09	FBst0090753
84D2-84D3	3R:7227744..7327938	Dp(3;2)GV-CH321-05I21	FBst0090094

*Deleted segments (cytology mapped)* [Export into hitlist]
84A6--84D9	3R:6850228..7552737	Df(3R)roe	2 stocks
84B1--84D	3R:6896978..7760098	Df(3R)Antp7	3 stocks
84B--84D10	3R:6896978..7617116	Df(3R)rn17
84B--84D10	3R:6896978..7617116	Df(3R)rn22
84B1--84D5	3R:6896978..7398630	Df(3R)Hu	2 stocks
84B1--84D4	3R:6896978..7336075	Df(3R)Scx4	2 stocks
84B1--84D3	3R:6896978..7331516	Df(3R)Antp2	3 stocks
84B1--84D3	3R:6896978..7331516	Df(3R)Antp-X1	2 stocks
84B1--84D2	3R:6896978..7233762	Df(3R)Antp-A41	2 stocks
84C1--84E1	3R:7097477..7849098	Df(3R)dsx2M	2 stocks
84C3--84D4	3R:7119657..7336075	Df(3R)Antp1	2 stocks
84C8--84F6	3R:7162486..8281680	Df(3R)dsx29	FBst0324934
84C8--84D4	3R:7162486..7336075	Df(3R)F76
84D2--84F16	3R:7189302..8383247	Df(3R)D6	2 stocks

*Duplicated segments (cytology mapped)* [Export into hitlist]
82A--85E	3R:4208470..9907978	Dp(3;3)Tpl-J25
82B--84F	3R:4410636..8383247	Dp(3;3)Tpl-J4
83B--85D	3R:5531603..9600373	Dp(3;3)D3
83C--95C	3R:5688967..23940806	Dp(3;3)M37
83C--86E	3R:5688967..11785612	Dp(3;3)Tpl-J1
83C--85C	3R:5688967..9202520	Dp(3;3)Tpl-J23
83C--84F	3R:5688967..8383247	Dp(3;3)Tpl-T21
83C--84E	3R:5688967..8130321	Dp(3;3)Tpl-T8
83D--84D	3R:5948971..7760098	Dp(3;Y)77ab
83E1--100D2	3R:6192284..31837725	Dp(3;Y)Tpl7
83E1--99E	3R:6192284..30323585	Dp(3;Y)Tpl11
84A--85A	3R:6625559..8767344	Dp(3;3)D1	FBst0305475
84C3--84D4	3R:7119657..7336075	Dp(3;3)Antp1	FBst0305979

*Inversion breakpoints (cytology mapped)* [Export into hitlist]
81-99E	3R:3461351..30323585	In(3R)D116.8
81-99B	3R:3461351..29775722	In(3R)CA52
81-98E	3R:3461351..28855898	In(3R)HR13
81-98C	3R:3461351..28383802	In(3R)CA33
81-98C	3R:3461351..28383802	In(3R)CA23
81-95F	3R:3461351..24380882	In(3R)284
81F-95D	3R:3461351..24063100	In(3R)253
81F-93E	3R:3461351..21645979	In(3R)C289
81-92A	3R:3461351..19695282	In(3R)SM26
81F-90C	3R:3461351..17916873	In(3R)1000
81F-89E2	3R:3461351..16847365	In(3R)iab4-3110
81F-89D	3R:3461351..16736155	In(3R)Mg137
81F-89B9	3R:3461351..16273584	In(3R)pnr[VX5]
81F-88B	3R:3461351..14415067	In(2R)TSR-8[Sz]
81-85D	3R:3461351..9600373	In(3R)BTD3
81F-85D	3R:3461351..9600373	In(3R)DTD133
81-84E	3R:3461351..8130321	In(3R)CA37
82A-87C	3R:4208470..12773541	In(3R)AL13
82-84	3R:4208470..8383247	In(3R)LD29
82C-84D	3R:4501203..7760098	In(3R)Dem1-7
82D-98E	3R:4657100..28855898	In(3R)IC67-327
82F-92D	3R:5101129..20259177	In(3R)SM23
82F-92B	3R:5101129..19971232	In(3R)Mg145
83-99	3R:5364156..30597427	In(3R)LD30
83A-88E	3R:5364156..15316331	In(3R)Alt-4
83C-85B	3R:5688967..8979804	In(3R)Mg67
83C-85B	3R:5688967..8979804	In(3R)PS31
83D-96A	3R:5948971..24840518	In(3R)Mg140
83D-94E	3R:5948971..23363938	In(3R)SM22
83E-86A	3R:6192284..10335171	In(3R)SM34
84A4-85D	3R:6695513..9600373	In(3R)pb[26]
84A4-84D	3R:6695513..7760098	In(3R)pb[24]
84B-97A	3R:6896978..26362804	In(3R)Mg146
84B-97A	3R:6896978..26362804	In(3R)Mg147
84B1-95F	3R:6896978..24380882	In(3R)Scr[18]
84B-92D	3R:6896978..20259177	In(3R)Dem1-9
84B1-85F	3R:6896978..10201762	In(3R)Antp[R]	2 stocks
84B-85C	3R:6896978..9202520	In(3R)Dem4-3
84B2-87C	3R:6986096..12773541	In(3R)Antp[5]
84B2-85E	3R:6986096..9907978	In(3R)Antp[B]	3 stocks
84C-93D3	3R:7097477..21290337	In(3R)e[H3]
84C-89B	3R:7097477..16576178	In(3R)84C;89B
84C-87C	3R:7097477..12773541	In(3R)Two-b100
84D-91E	3R:7174723..19070332	In(3R)TC
84D-89F	3R:7174723..17256343	In(3R)84D;89F
84D-86C	3R:7174723..11013213	In(3R)St-L

*Transposition and translocation breakpoints (cytology mapped)* [Export into hitlist]
81F--88B	3R:3461351..14415067	Dp(3;3)P26
84D;89B4-89B9;91E	3R:7174723..7760098	Tp(3;3)pnr[VX9]
h1-h25B;84D;89C-89D;90A;99F-100A	3R:7174723..7760098	T(Y;3)ss[114.12]