Cytology	Observed or estimated sequence coordinates	Symbol	Stocks


*Genes (mapped to the sequence)* [Export into hitlist]
92A3-92A5	3R:19412689..19460311	CG31221	55 stocks
92A5-92A10,91F-92A,92A6-92A7	3R:19461085..19597288	Dys	29 stocks
92A5-92A5	3R:19461879..19463066	Scsα2	8 stocks
92A6-92A6	3R:19489570..19491115	CG15025	4 stocks
92A10-92A10	3R:19586196..19586263	snoRNA:CD12
92A10-92A10	3R:19597502..19598955	Cpr92A	3 stocks
92A10-92A10	3R:19600635..19602629	CG7333	6 stocks
92A10-92A10	3R:19603375..19606475	CG7342	5 stocks
92A10-92A10	3R:19607254..19609322	CG17751	5 stocks
92A10-92A10	3R:19610225..19612437	CG17752	5 stocks
92A10-92A10	3R:19613381..19615784	CG16727	6 stocks
92A10-92A11	3R:19616024..19632718	CG6231	12 stocks

*Genes (mapped, but not to the sequence)* [Export into hitlist]
81-100	3R:3461351..32068446	cant	2 stocks
81-100	3R:3461351..32068446	l(3)cl-R3	2 stocks
86C-100F	3R:10473726..32068446	mei-P44
91F13-92C2	3R:19250961..20037706	Bpt	3 stocks
92A-92A	3R:19261020..19695282	l(3)neo51
92A-92A	3R:19261020..19695282	l(3)S024639b

*Insertions (cytology mapped)* [Export into hitlist]
91F-92A	3R:19070333..19695282	P{lacW}S111110a
91F-92A	3R:19070333..19695282	P{S3.8}5
92A-92B	3R:19261020..19971232	P{23.3}92AB
92A--92B	3R:19261020..19971232	P{hsneo}144
92A-92A	3R:19261020..19695282	P{lacW}Delta[bl1]
92A-92A	3R:19261020..19695282	P{DBF9-A}92A
92A-92A	3R:19261020..19695282	H{har1}G12-1
92A-92A	3R:19261020..19695282	P{lacW}Delta[S148504]
92A-92A	3R:19261020..19695282	P{lacW}l(3)S115510b[S115510b]
92A-92A	3R:19261020..19695282	P{y(loxP.enh).(-FRT).C}92A
92A-92A	3R:19261020..19695282	P{lacW}l(3)S026020b[S026020b]
92A-92A	3R:19261020..19695282	P{lacW}Delta[S111909]
92A-92A	3R:19261020..19695282	P{lacW}Delta[S144011]
92A-92A	3R:19261020..19695282	P{?lacW}Delta[bl5]
92A-92A	3R:19261020..19695282	P{lacW}Delta[S142311]
92A-92A	3R:19261020..19695282	P{lArB}A401.1M3
92A-92A	3R:19261020..19695282	P{R3.9}2
92A-92A	3R:19261020..19695282	P{lacW}Delta[S105314]
92A-92A	3R:19261020..19695282	P{A[[22]]O[[31]]}9
92A-92A	3R:19261020..19695282	P{y(-loxP).(FRT.pro).C}92A
92A-92A	3R:19261020..19695282	P{y(loxP.enh).(FRT.pro).C}92A
92A-92A	3R:19261020..19695282	P{lacW}Delta[S092611b]
92A-92A	3R:19261020..19695282	P{lacW}l(3)S024639b[S024639b]
92A-92A	3R:19261020..19695282	P{lacW}Delta[S049520]
92A-92A	3R:19261020..19695282	P{lacW}Delta[S130403]
92A5-92A10	3R:19440153..19616412	TI{TI}Dys[sfGFP]
92A5-92A10	3R:19440153..19616412	P{GSV1}Dys[GS12472]
92A5-92A10	3R:19440153..19616412	TI{TI}Dys[long.sfGFP]
92A5-92A10	3R:19440153..19616412	TI{TI}Dys[short.sfGFP]
92A5-92A5	3R:19440153..19465697	TI{TI}Scsα2[9]
92A10-92A10	3R:19583205..19616412	PBac{PB}c01233

*Insertions (sequence mapped)* [Export into hitlist]
92A5	3R:19440765..19440765	Mi{MIC}CG31221[MI00150]	FBst0030636
92A5	3R:19451608..19451608	Mi{MIC}CG31221[MI03786]	FBst0044677
92A5	3R:19453650..19453650	P{EPgy2}CG31221[EY10678]	FBst0020199
92A5	3R:19454228..19454228	P{GSV6}GS9366	FBst0309731
92A5	3R:19456795..19456795	PBac{WH}CG31221[f05025]	FBst0018831
92A5	3R:19461885..19461885	PBac{WH}Scsα2[f01790]	FBst0086065
92A5	3R:19463186..19463186	Mi{ET1}Dys[MB08490]	FBst0027759
92A5	3R:19463451..19463451	P{XP}Dys[d01369]
92A5-92A5	3R:19463452..19463551	P{XP}Dys[d05905]
92A5	3R:19463460..19463460	P{XP}Dys[d00360]
92A5	3R:19463463..19463463	P{XP}Dys[d07105]
92A5	3R:19463463..19463463	P{XP}Dys[d01926]
92A5	3R:19463488..19463488	P{EPgy2}Dys[EY08889]	FBst0017504
92A5	3R:19463949..19463949	PBac{WH}Dys[f05865]
92A5	3R:19463951..19463951	PBac{RB}Dys[e03558]
92A6-92A6	3R:19464148..19464148	P{EP}Dys[EP3397]	FBst0017121
92A6	3R:19471180..19471180	Mi{MIC}Dys[MI09443]	FBst0053107
92A6-92A6	3R:19473941..19473941	PBac{SAstopDsRed}LL08138	FBst0328742
92A6	3R:19478603..19478603	Mi{ET1}Dys[MB02524]	FBst0024182
92A6	3R:19485513..19485513	PBac{WH}Dys[f01051]
92A6	3R:19487516..19487516	Mi{MIC}Dys[MI02876]	FBst0037037
92A6	3R:19490775..19490775	Mi{MIC}Dys[MI07080]	FBst0042464
92A6	3R:19493536..19493536	Mi{ET1}Dys[MB01222]	FBst0023023
92A6	3R:19497209..19497209	P{XP}Dys[d09416]
92A6	3R:19497215..19497258	PBac{WH}Dys[f01145]
92A6	3R:19498929..19498929	P{XP}Dys[d03320]
92A6	3R:19503091..19503091	PBac{WH}Dys[f00491]
92A6-92A6	3R:19503610..19503610	P{EP}Dys[GE20705]
92A6-92A6	3R:19505647..19505647	PBac{681.P.FSVS-1}Dys[CPTI002256]	FBst0325274
92A7	3R:19509151..19509151	P{GSV2}GS50394	FBst0328868
92A7	3R:19511191..19511214	PBac{RB}Dys[e00473]
92A7	3R:19512359..19512359	Mi{ET1}Dys[MB01698]	FBst0023343
92A7_r6	3R:19531260..19531260	Mi{PT-GFSTF.0}Dys[MI01893-GFSTF.0]	FBst0059782
92A7	3R:19531260..19531260	Mi{MIC}Dys[MI01893]	FBst0037029
92A7	3R:19532373..19532373	PBac{PB}Dys[c05751]
92A7	3R:19532373..19532373	PBac{PB}Dys[c05798]
92A7	3R:19537761..19537761	PBac{WH}Dys[f00572]
92A8	3R:19556942..19556942	PBac{WH}Dys[f00715]
92A8	3R:19558280..19558280	Mi{MIC}Dys[MI03993]	FBst0036944
92A8	3R:19559323..19559323	Mi{ET1}Dys[MB03186]	FBst0024049
92A9-92A9	3R:19567653..19567653	PBac{803.P.SVS-0}Dys[CPTI003818]	FBst0325437
92A9	3R:19577815..19577815	Mi{MIC}Dys[MI00812]	FBst0037109
92A9	3R:19578847..19578847	PBac{PB}Dys[c07024]	FBst0017796
92A10	3R:19588345..19588345	Mi{MIC}Dys[MI08928]	FBst0051243
92A10	3R:19595952..19595952	Mi{MIC}Dys[MI09686]	FBst0054506
92A10	3R:19596689..19596689	Mi{ET1}MB04014	FBst0024559
92A10	3R:19600492..19600492	Mi{MIC}MI05074	FBst0038608
92A10	3R:19606859..19606859	Mi{MIC}MI05678	FBst0042101
92A10	3R:19607671..19607671	P{GSV6}GS9320	FBst0309696
92A10	3R:19615376..19615376	Mi{MIC}CG16727[MI06426]	FBst0042390

*Deleted segments (sequence mapped)* [Export into hitlist]
91D4--92A11	3R:18906634..19642036	Df(3R)ED5938	2 stocks
91F11--92A6	3R:19212136..19503091	Df(3R)BSC850	FBst0027922
91F12--92B3	3R:19226294..19835087	Df(3R)ED5942	2 stocks
92A3--92B3	3R:19403413..19847001	Df(3R)BSC809	FBst0027380
92A3--92A6	3R:19403413..19503091	Df(3R)BSC818	FBst0027579
92A5--92A11	3R:19463463..19641316	Df(3R)Exel6184	FBst0007663

*Duplicated segments (sequence mapped)* [Export into hitlist]
92A3-92A6	3R:19388516..19472508	Dp(3;2)GV-CH321-24E09	FBst0090221

*Deleted segments (cytology mapped)* [Export into hitlist]
85E15--95C8	3R:9893362..23892547	Df(3R)pug[D-rv7]
86A1--95B3	3R:10201763..23780006	Df(3R)pug[D-rv1]
86B6--94F4	3R:10449672..23476389	Df(3R)pug[D-rv10]
86C3--95B4	3R:10618839..23780016	Df(3R)pug[D-rv2]
86C3--95A5	3R:10618839..23649044	Df(3R)pug[D-rv6]
86C3--94F3	3R:10618839..23454611	Df(3R)pug[D-rv4]
87E8--93C	3R:13364311..21232815	Df(3R)MRS	2 stocks
89D--92A14	3R:16576249..19695282	Df(3R)P47	5 stocks
91A1--92B11	3R:18268611..19971232	Df(3R)Delta-KX24
91B--92A8	3R:18446795..19565322	Df(3R)Delta-Sp
91C--92E	3R:18672274..20525400	Df(3R)Delta-KX5
91C7--92A8	3R:18769308..19565322	Df(3R)Delta-KX23	FBst0002411
91D1--92A7	3R:18793976..19547441	Df(3R)Delta-PX
91D3--92A8	3R:18871255..19565322	Df(3R)Delta-FX2
91F1--92D6	3R:19070333..20226758	Df(3R)Delta-BX12	2 stocks
91F3--92C1	3R:19133737..20034977	Df(3R)Delta-KX16
91F5--92E15	3R:19177580..20525400	Df(3R)H[KX2]
91F5--92E11	3R:19177580..20467222	Df(3R)Delta5
91F6--92B	3R:19177590..19971232	Df(3R)Delta-KX10
91F6--92B8	3R:19177590..19929536	Df(3R)Delta-KX9
91F10--92E	3R:19177630..20525400	Df(3R)Delta-KX17
91F10--92B3	3R:19177630..19864357	Df(3R)Delta-P
91F11--92A13	3R:19178113..19685224	Df(3R)Delta-X43
91F13--92E3	3R:19250961..20337985	Df(3R)Delta-KX18
92A1--92D9	3R:19261020..20259177	Df(3R)oF4
92A2--92B10	3R:19317378..19964356	Df(3R)Delta-KX4
92A6--92D2	3R:19465698..20173929	Df(3R)12

*Duplicated segments (cytology mapped)* [Export into hitlist]
83C--95C	3R:5688967..23940806	Dp(3;3)M37
83E1--100D2	3R:6192284..31837725	Dp(3;Y)Tpl7
83E1--99E	3R:6192284..30323585	Dp(3;Y)Tpl11
87E8--93C	3R:13364311..21232815	Dp(3;3)MRS	2 stocks
88B--92D	3R:14226398..20259177	Dp(3;3)C123.3	3 stocks
88D--100B	3R:14675783..31275051	Dp(3;3)SMG35
89D--93A	3R:16576249..20983973	Dp(3;3)C123.6
89D--92A14	3R:16576249..19695282	Dp(3;3)P47
89E--93A	3R:16736156..20983973	Dp(3;3)M40
90A--95A1	3R:17256344..23546750	Dp(3;3)M95A[+]33a
90A--95A1	3R:17256344..23546750	Dp(3;3)M95A[+]33
90E--98B	3R:18004999..28082526	Dp(3;3)M95A[+]13	3 stocks
91A--92E	3R:18268611..20525400	Dp(3;3)M41
91B2--97F	3R:18476184..27434247	Dp(3;3)M96C[+]20
91C3--92E	3R:18712360..20525400	Dp(3;3)MKRS-D2
91D--94D	3R:18793976..23114712	Dp(3;3)M48
91F--95A1	3R:19070333..23546750	Dp(3;3)M95A[+]10
91F--94D	3R:19070333..23114712	Dp(3;3)M73
92A3--95A2	3R:19373736..23588736	Dp(3;3)M95A[+]h67

*Inversion breakpoints (cytology mapped)* [Export into hitlist]
81-99E	3R:3461351..30323585	In(3R)D116.8
81-99B	3R:3461351..29775722	In(3R)CA52
81-98E	3R:3461351..28855898	In(3R)HR13
81-98C	3R:3461351..28383802	In(3R)CA33
81-98C	3R:3461351..28383802	In(3R)CA23
81-95F	3R:3461351..24380882	In(3R)284
81F-95D	3R:3461351..24063100	In(3R)253
81F-93E	3R:3461351..21645979	In(3R)C289
81-92A	3R:3461351..19695282	In(3R)SM26
82D-98E	3R:4657100..28855898	In(3R)IC67-327
82F-92D	3R:5101129..20259177	In(3R)SM23
82F-92B	3R:5101129..19971232	In(3R)Mg145
83-99	3R:5364156..30597427	In(3R)LD30
83D-96A	3R:5948971..24840518	In(3R)Mg140
83D-94E	3R:5948971..23363938	In(3R)SM22
84B-97A	3R:6896978..26362804	In(3R)Mg146
84B-97A	3R:6896978..26362804	In(3R)Mg147
84B1-95F	3R:6896978..24380882	In(3R)Scr[18]
84B-92D	3R:6896978..20259177	In(3R)Dem1-9
84C-93D3	3R:7097477..21290337	In(3R)e[H3]
84E-99E	3R:7760099..30323585	In(3R)AL14
85A-96E	3R:8383248..25712016	In(3R)V103
85D-95E	3R:9202521..24189602	In(3R)K19
85D-94E	3R:9202521..23363938	In(3R)Dem1-8
85F-97F	3R:9907979..27434247	In(3R)IC67-79
86B-98E	3R:10335172..28855898	In(3R)Dem3-7
86B-92F	3R:10335172..20794570	In(3R)CW
86D-97A	3R:11013214..26362804	In(3R)Nel-D
86E-98F	3R:11284446..29184631	In(3R)Mg139
86E-97C	3R:11284446..26733804	In(3R)St-E
86E-92F	3R:11284446..20794570	In(3R)BoI
86F-100E	3R:11785613..32068441	In(3R)M
86F-98F	3R:11785613..29184631	In(3R)IW12
86F-96A	3R:11785613..24840518	In(3R)PS32
87A-100F	3R:11871713..32068446	In(3R)St-C
87B-100F	3R:12147055..32068446	In(3R)IW13
87B-92F	3R:12147055..20794570	In(3R)PS33
87B-92F	3R:12147055..20794570	In(3R)KD2
87C-98F	3R:12535256..29184631	In(3R)Mg157
87C-95A	3R:12535256..23714950	In(3R)KOG-M
87C-92C	3R:12535256..20096867	In(3R)Dem1-13
87D-93A	3R:12773542..20983973	In(3R)IW14
87D-92F	3R:12773542..20794570	In(3R)K20
87D-92C	3R:12773542..20096867	In(3R)ZP25
87E-97A	3R:13164290..26362804	In(3R)Mg21
87E-95A	3R:13164290..23714950	In(3R)SM24
87E-94E	3R:13164290..23363938	In(3R)Alt-6
87E-94A	3R:13164290..22474684	In(3R)SM29
87E-92E	3R:13164290..20525400	In(3R)PS
88-97A	3R:13843303..26362804	In(3R)SM27
88A-94A	3R:13843303..22474684	In(3R)SM30
88A-93C	3R:13843303..21232815	In(3R)K25
88A-93C	3R:13843303..21232815	In(3R)ZP29
88C-98F	3R:14415068..29184631	In(3R)PS35
88C-96E	3R:14415068..25712016	In(3R)PE
88C-96D	3R:14415068..25439751	In(3R)KH
88D-94A	3R:14675783..22474684	In(3R)PS38
88D-94A	3R:14675783..22474684	In(3R)KI
88E-93F	3R:15054626..22019295	In(3R)AL16
88E-93A	3R:15054626..20983973	In(3R)IW15
89A-99D	3R:15623020..30152942	In(3R)St-M
89B-98B	3R:16027430..28082526	In(3R)P33
89B-96A	3R:16027430..24840518	In(3R)PH
89B9-97D	3R:16229403..27054991	In(3R)sbd[l]
89C-96A	3R:16576179..24840518	In(3R)PS47
89C2-96A19	3R:16576189..24754796	In(3R)ven
89D-92A	3R:16576249..19695282	In(3R)89D;92A
89E-98B	3R:16736156..28082526	In(3R)89E-98B
89E-93A	3R:16736156..20983973	In(3R)Mg20
89E2-99F	3R:16791761..30597427	In(3R)abd-A[M1]
89E2-96A	3R:16791761..24840518	In(3R)iab3[793]
89E2-93F	3R:16791761..22019295	In(3R)iab2[S3]
89E3-100C	3R:16847366..31613779	In(3R)Abd-B[iab9-48]
89E5-96A13	3R:16951015..24654655	In(3R)m53e
89F-96A	3R:17123623..24840518	In(3R)Mg143
89F-95A	3R:17123623..23714950	In(3R)89386
90B-98A	3R:17436925..27670954	In(3R)St-H
90B-97D	3R:17436925..27054991	In(3R)Dem1-10
90D-93B	3R:17916874..21124232	In(3R)KJ
90E-99A	3R:18004999..29468940	In(3R)Alt-7
90E-93A	3R:18004999..20983973	In(3R)ID
90F-96A	3R:18118268..24840518	In(3R)PI
90F-94E	3R:18118268..23363938	In(3R)ZP27
91A-93C	3R:18268611..21232815	In(3R)GC21
91B-97C	3R:18446795..26733804	In(3R)ZP24
91B-96B	3R:18446795..25101913	In(3R)C208
91C-93B	3R:18672274..21124232	In(3R)PS39
91D-98B	3R:18793976..28082526	In(3R)Mg136
92-97	3R:19261020..27434247	In(3R)CA35
92A-94C	3R:19261020..22827295	In(3R)Dem1-11

*Transposition and translocation breakpoints (cytology mapped)* [Export into hitlist]
92A;[]-92A;[]	3R:19261020..19695282	T(3;?)Delta[BX41]
92A;[]-92A;[]	3R:19261020..19695282	T(3;?)Delta[BX38]
92A;[]-92A;[]	3R:19261020..19695282	T(3;?)Delta[BX43]
92A-101	3R:19261020..19616412	T(3;4)C1
92A5--6;[>101]	3R:19440153..19465697	T(3;4)A5