Cytology	Observed or estimated sequence coordinates	Symbol	Stocks


*Genes (mapped to the sequence)* [Export into hitlist]
97D5-97D7,97D2-97D6,97D-97D	3R:26881734..26910997	T48	11 stocks
97D7-97D7,97D-97D,97D-97D,97D-97D	3R:26910775..26912886	Ets97D	10 stocks
97D7-97D9	3R:26915761..26945309	CG46339	21 stocks
97D9-97D9	3R:26945534..26947248	CG14252	5 stocks
97D9-97D9	3R:26947263..26947334	tRNA:Gln-TTG-1-2
97D9-97D9	3R:26947512..26947583	tRNA:Gln-TTG-1-3	FBst0043128
97D9-97D10	3R:26947830..26949682	Spag1	5 stocks

*Genes (mapped, but not to the sequence)* [Export into hitlist]
81-100	3R:3461351..32068446	cant	2 stocks
81-100	3R:3461351..32068446	l(3)cl-R3	2 stocks
86C-100F	3R:10473726..32068446	mei-P44
97A1-98A2	3R:26106892..27498279	goul	2 stocks
97D1-97D13	3R:26733805..27011324	l(3)03884	FBst0010344
97D1-97D13	3R:26733805..27011324	l(3)tk11	FBst0029016
97D1-97D13	3R:26733805..27011324	l(3)tk21	FBst0029017
97D1-97D13	3R:26733805..27011324	l(3)tk12	FBst0029015
97D2-97D9	3R:26783122..26949392	l(3)97De	2 stocks
97D2-97D9	3R:26783122..26949392	l(3)97Df
97D2-97D9	3R:26783122..26949392	l(3)97Da	2 stocks

*Insertions (cytology mapped)* [Export into hitlist]
97--98	3R:26106892..29184631	P{UAS-y.RNAi}7A-97-98
97C-97D	3R:26558308..27054991	P{lacW}heca[B4-3-20]
97D-97D	3R:26733805..27054991	P{lacW}S139614
97D-97D	3R:26733805..27054991	P{lacW}S104509b
97D-97D	3R:26733805..27054991	P{A92}A63
97D-97D	3R:26733805..27054991	P{Sgs1-lacZ.C-1021-mu}97D
97D7-97D7	3R:26910376..26915811	P{RS3r}CB-6244-3

*Insertions (sequence mapped)* [Export into hitlist]
97D7	3R:26914906..26914906	Mi{MIC}MI07493
97D6-97D6	3R:26915724..26915724	P{EP}EP1141	FBst0325474
97D7	3R:26915725..26915725	P{GSV6}GS14222	FBst0323001
97D7	3R:26915725..26915725	P{GSV1}GS3173
97D6-97D6	3R:26915725..26915725	P{EP}CG46339[EP3289]
97D8,97D7	3R:26915725..26915725	P{RS3}CB-6244-3	FBst0326530
97D7	3R:26915731..26915731	P{UASp-YFP.CG32673}35	FBst0009833
97D8	3R:26915732..26915732	P{EPgy2}CG46339[EY09726]	FBst0016950
97D7	3R:26915732..26915732	P{wHy}CG46339[DG25305]
97D7	3R:26915732..26915732	P{GSV2}GS5019	FBst0322353
97D8_r5	3R:26915735..26915735	PBac{SAstopDsRed}LL03972	FBst0319774
97D8-97D8	3R:26915854..26915854	P{PZ}CG46339[03884]	FBst0010344
97D8	3R:26918643..26918664	PBac{RB}CG46339[e01352]
97D8	3R:26918643..26918643	PBac{WH}CG46339[f00631]
97D8	3R:26918788..26918788	Mi{MIC}CG46339[MI05928]	FBst0043777
97D8	3R:26924693..26924693	P{EPgy2}CG46339[EY01404]	FBst0015835
97D8	3R:26929384..26929384	P{EPgy2}CG46339[EY11539]	FBst0020680
97D8	3R:26934637..26934637	Mi{MIC}CG46339[MI00000B]	2 stocks
97D8	3R:26936318..26936318	PBac{5HPw[+]}CG46339[A427]
97D8	3R:26937670..26937670	PBac{WH}CG46339[f01642]
97D8	3R:26937754..26937754	Mi{MIC}CG46339[MI03778]	FBst0037085
97D9	3R:26943305..26943305	Mi{MIC}CG46339[MI07724]	FBst0043758
97D9_r6	3R:26943552..26943553	Mi{Trojan-GAL4.0}CG46339[MI01539-TG4.0]	FBst0077710
97D9	3R:26943553..26943553	Mi{MIC}CG46339[MI01539]	FBst0036138
97D9	3R:26946237..26946237	Mi{MIC}CG14252[MI07367]	FBst0043700
97D9	3R:26946676..26946676	Mi{MIC}CG14252[MI08700]	FBst0051103
97D10	3R:26947448..26947448	PBac{PB}c00779
97D9	3R:26947519..26947519	Mi{MIC}tRNA:Gln-TTG-1-3[MI07338]	FBst0043128
97D9	3R:26948804..26948804	Mi{MIC}Spag1[MI13577]	FBst0059166

*Deleted segments (sequence mapped)* [Export into hitlist]
97A--98A2	3R:26059954..27388608	Df(3R)Tl-P	3 stocks
97B9--97D12	3R:26535234..26980507	Df(3R)ED6235	2 stocks
97C3--97D11	3R:26645831..26958686	Df(3R)BSC524	FBst0025052
97D2--97F1	3R:26799036..27281901	Df(3R)ED6255	2 stocks

*Duplicated segments (sequence mapped)* [Export into hitlist]
97D6-97D13	3R:26905843..27006488	Dp(3;2)GV-CH321-77G13	FBst0089867

*Deleted segments (cytology mapped)* [Export into hitlist]
96F3--97D	3R:25779155..27054991	Df(3R)boss13
96F11--98A	3R:26068068..27670954	Df(3R)Pr6
96F11--97F11	3R:26068068..27434247	Df(3R)ro82b
96F11--97E3	3R:26068068..27135818	Df(3R)Pr1
96F11--97D10	3R:26068068..26956005	Df(3R)Pr-P9
97A--97E11	3R:26106892..27264826	Df(3R)Tl-K
97A--97E	3R:26106892..27264826	Df(3R)D816
97B--97F11	3R:26362805..27434247	Df(3R)Tl-D
97B--97F	3R:26362805..27434247	Df(3R)IR25
97B--97E11	3R:26362805..27264826	Df(3R)Tl-I	2 stocks
97D--98A	3R:26733805..27670954	Df(3R)IR7
97D1--97D15	3R:26733805..27054991	Df(3R)ro-z1
97D1--97D13	3R:26733805..27011324	Df(3R)ro80b	2 stocks
97D2--97D9	3R:26783122..26949392	Df(3R)ro-XB3
97D5--98A1	3R:26878626..27466263	Df(3R)Bd

*Duplicated segments (cytology mapped)* [Export into hitlist]
83E1--100D2	3R:6192284..31837725	Dp(3;Y)Tpl7
83E1--99E	3R:6192284..30323585	Dp(3;Y)Tpl11
88D--100B	3R:14675783..31275051	Dp(3;3)SMG35
90E--98B	3R:18004999..28082526	Dp(3;3)M95A[+]13	3 stocks
91B2--97F	3R:18476184..27434247	Dp(3;3)M96C[+]20
92E--98C	3R:20259178..28383802	Dp(3;3)M95A[+]30
92E--98C	3R:20259178..28383802	Dp(3;3)M95A[+]30a
92E1--98A	3R:20259178..27670954	Dp(3;3)M95A[+]11
93D5--99B1	3R:21314671..29505909	Dp(3;3)M95A[+]12
94C7--98A	3R:22786737..27670954	Dp(3;3)M96C[+]14
94C7--97D	3R:22786737..27054991	Dp(3;3)M96C[+]21
94D--99E	3R:22827296..30323585	Dp(3;3)M95A[+]16
95A1--98B	3R:23509790..28082526	Dp(3;3)M95A[+]9
96A1--100F	3R:24380883..32068446	Dp(3;3)M96C[+]16
96A20--99F4	3R:24754797..30452016	Dp(3;3)M96C[+]18
97D5--99B8	3R:26878626..29717663	Dp(3;1)R87

*Inversion breakpoints (cytology mapped)* [Export into hitlist]
81-99E	3R:3461351..30323585	In(3R)D116.8
81-99B	3R:3461351..29775722	In(3R)CA52
81-98E	3R:3461351..28855898	In(3R)HR13
81-98C	3R:3461351..28383802	In(3R)CA33
81-98C	3R:3461351..28383802	In(3R)CA23
82D-98E	3R:4657100..28855898	In(3R)IC67-327
83-99	3R:5364156..30597427	In(3R)LD30
84E-99E	3R:7760099..30323585	In(3R)AL14
85F-97F	3R:9907979..27434247	In(3R)IC67-79
86B-98E	3R:10335172..28855898	In(3R)Dem3-7
86E-98F	3R:11284446..29184631	In(3R)Mg139
86F-100E	3R:11785613..32068441	In(3R)M
86F-98F	3R:11785613..29184631	In(3R)IW12
87A-100F	3R:11871713..32068446	In(3R)St-C
87B-100F	3R:12147055..32068446	In(3R)IW13
87C-98F	3R:12535256..29184631	In(3R)Mg157
88C-98F	3R:14415068..29184631	In(3R)PS35
89A-99D	3R:15623020..30152942	In(3R)St-M
89B-98B	3R:16027430..28082526	In(3R)P33
89B9-97D	3R:16229403..27054991	In(3R)sbd[l]
89E-98B	3R:16736156..28082526	In(3R)89E-98B
89E2-99F	3R:16791761..30597427	In(3R)abd-A[M1]
89E3-100C	3R:16847366..31613779	In(3R)Abd-B[iab9-48]
90B-98A	3R:17436925..27670954	In(3R)St-H
90B-97D	3R:17436925..27054991	In(3R)Dem1-10
90E-99A	3R:18004999..29468940	In(3R)Alt-7
91D-98B	3R:18793976..28082526	In(3R)Mg136
92-97	3R:19261020..27434247	In(3R)CA35
92B-98C	3R:19695283..28383802	In(3R)SM25
92C-99F	3R:19971233..30597427	In(3R)IW22
92D-100A	3R:20096868..30928228	In(3R)92D;100A
92D-98F	3R:20096868..29184631	In(3R)89300
92E-100E	3R:20259178..32068441	In(3R)92E-100E
92E-97E	3R:20259178..27264826	In(3R)AL17
93D-98F	3R:21232816..29184631	In(3R)PS49
93D-98F	3R:21232816..29184631	In(3R)KOG-N
93D-98B	3R:21232816..28082526	In(3R)St-Q
93E-100F	3R:21400810..32068446	In(3R)ML193
93E-97D	3R:21400810..27054991	In(3R)IW17
93F-99C	3R:21645980..29957664	In(3R)V16
93F-98C	3R:21645980..28383802	In(3R)Dem1-14
94A-98C	3R:22019296..28383802	In(3R)ZP30
94C-99F	3R:22666855..30597427	In(3R)VV10
94E-98D	3R:23114713..28644088	In(3R)C13
95D-98F	3R:23940807..29184631	In(3R)KOG-O
96A-100D	3R:24380883..31917440	In(3R)Mg70
96A-98B	3R:24380883..28082526	In(3R)ZP26
96B-99E	3R:24840519..30323585	In(3R)Dem4-5
96B-98A	3R:24840519..27670954	In(3R)Dem1-15
96C-98E	3R:25101914..28855898	In(3R)St-P
96C-98D	3R:25101914..28644088	In(3R)Dem1-16
96E-98F	3R:25439752..29184631	In(3R)J
96F-100B	3R:25712017..31275051	In(3R)St-G
97A-100A	3R:26106892..30928228	In(3R)SM28

*Transposition and translocation breakpoints (cytology mapped)* [Export into hitlist]
97D;[]-97D;[]	3R:26733805..27054991	T(3;4)C83