Legend:
| Exons / Sequence Areas | |||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Subsets | 2R : 8,860,364 .. 8,860,430 | 2R : 8,860,364 .. 8,860,651 | 2R : 8,860,399 .. 8,860,651 | 2R : 8,860,399 .. 8,860,430 | 2R : 8,862,773 .. 8,863,010 | 2R : 8,862,843 .. 8,863,010 | 2R : 8,865,856 .. 8,866,059 | 2R : 8,866,346 .. 8,866,357 | 2R : 8,867,004 .. 8,867,081 | 2R : 8,867,145 .. 8,867,533 | 2R : 8,867,598 .. 8,868,122 | 2R : 8,868,182 .. 8,868,306 | 2R : 8,868,366 .. 8,869,788 | 2R : 8,869,844 .. 8,870,447 | 2R : 8,870,583 .. 8,870,682 | 2R : 8,870,924 .. 8,871,023 | 2R : 8,872,220 .. 8,872,424 | 2R : 8,872,479 .. 8,873,235 | 2R : 8,873,295 .. 8,874,454 | 2R : 8,874,668 .. 8,874,862 | 2R : 8,874,692 .. 8,874,862 | 2R : 8,874,710 .. 8,874,862 | 2R : 8,874,935 .. 8,875,050 | 2R : 8,875,357 .. 8,877,629 | 2R : 8,878,138 .. 8,878,617 | 2R : 8,879,218 .. 8,879,355 | 2R : 8,879,509 .. 8,879,795 | 2R : 8,879,521 .. 8,879,795 | 2R : 8,879,857 .. 8,881,954 | 2R : 8,882,304 .. 8,882,416 | 2R : 8,882,729 .. 8,882,838 | 2R : 8,883,054 .. 8,883,399 | 2R : 8,883,472 .. 8,883,492 | 2R : 8,883,622 .. 8,883,922 | 2R : 8,884,191 .. 8,884,325 | 2R : 8,884,215 .. 8,884,325 | 2R : 8,884,383 .. 8,884,802 | 2R : 8,884,871 .. 8,885,072 | 2R : 8,885,136 .. 8,888,097 |
| embryos 0-2 hr after egg laying | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| embryos 2-4 hr after egg laying | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.3 | 0.2 | 0.1 | 0 | 0.1 | 0.2 | 0 | 0 | 0 | 0.4 | 0 | 0 | 0.8 | 0 | 0.2 | 0.7 | 0.9 | 0.5 | 0.5 | 0.7 |
| embryos 4-6 hr after egg laying | 0 | 0 | 0 | 0 | 0 | 0 | 0.1 | 0 | 0.4 | 0.5 | 0.2 | 0.3 | 0.4 | 0.5 | 0 | 0 | 0 | 0.3 | 0.8 | 0.8 | 0.8 | 0.8 | 0.5 | 1.1 | 1.1 | 0.6 | 0.9 | 0.9 | 1.7 | 1.3 | 0 | 2.8 | 0 | 1.9 | 1.6 | 1.7 | 2.1 | 1.5 | 2.6 |
| embryos 6-8 hr after egg laying | 0 | 0 | 0 | 0 | 0.1 | 0.1 | 0.9 | 0 | 1.5 | 1.6 | 1.4 | 0.8 | 0.9 | 2.4 | 1.4 | 0 | 1.7 | 1.3 | 1.7 | 2.1 | 2.2 | 2.2 | 1.8 | 2.8 | 3.5 | 2.5 | 2.2 | 2.2 | 3.9 | 7.5 | 0 | 7.4 | 0 | 5.1 | 4.3 | 4.4 | 4.6 | 4.5 | 6.1 |
| embryos 8-10 hr after egg laying | 0 | 0 | 0 | 0 | 0.6 | 0.9 | 2.7 | 0 | 4.1 | 5.2 | 3.8 | 3.3 | 3 | 4.9 | 2.8 | 0 | 3.1 | 3.5 | 5.1 | 5.4 | 5.3 | 5.1 | 4.1 | 6.5 | 7.7 | 6.1 | 5.7 | 5.8 | 7.9 | 14.9 | 0 | 13.6 | 0.4 | 10.5 | 8.8 | 9.1 | 9.5 | 8.4 | 11.5 |
| embryos 10-12 hr after egg laying | 0 | 0 | 0 | 0 | 0.6 | 0.9 | 2.9 | 0 | 5.1 | 4.9 | 3.5 | 3 | 3 | 5 | 3.8 | 0 | 3.3 | 3.7 | 5.6 | 5.6 | 5.7 | 5.7 | 4.9 | 6.7 | 8 | 7.5 | 6.1 | 6.2 | 9.9 | 17.8 | 0 | 15.6 | 0 | 12.2 | 11.9 | 11.9 | 11.7 | 9.8 | 15 |
| embryos 12-14 hr after egg laying | 0.4 | 0.1 | 0.1 | 1 | 4.1 | 5.5 | 8.6 | 0 | 13.6 | 15.1 | 11 | 10.6 | 10.9 | 15.4 | 10.8 | 0.5 | 9.6 | 11.3 | 17.1 | 19 | 19.1 | 18.5 | 14.9 | 19.7 | 22.4 | 20.7 | 19 | 19 | 29 | 47.4 | 0 | 36.4 | 0 | 34.6 | 28 | 28.4 | 35.9 | 31.9 | 35.3 |
| embryos 14-16 hr after egg laying | 0 | 0 | 0 | 0 | 2.9 | 4.1 | 14.3 | 0.6 | 18.8 | 22.6 | 10.7 | 9.7 | 10.1 | 15 | 11.4 | 0.8 | 11.8 | 9.3 | 16 | 15.1 | 14.7 | 14.2 | 12.1 | 20.3 | 28.2 | 24.1 | 12.9 | 12.7 | 27.1 | 48.1 | 0 | 46 | 0 | 35.3 | 21.1 | 21.4 | 24 | 18.9 | 29.4 |
| embryos 16-18 hr after egg laying | 0.1 | 0 | 0 | 0.2 | 2.7 | 3.8 | 11 | 0.6 | 14 | 17.6 | 8.6 | 7.9 | 8.6 | 12.4 | 8.6 | 0.5 | 8.5 | 9.1 | 13.2 | 15 | 14.9 | 14.6 | 10.6 | 16.3 | 20.2 | 17.5 | 13.3 | 13.3 | 23.5 | 38 | 0 | 39.4 | 0.8 | 29 | 18.6 | 18.6 | 22 | 18.3 | 27.7 |
| embryos 18-20 hr after egg laying | 0.1 | 0 | 0 | 0.2 | 1.9 | 2.8 | 8 | 0 | 11.9 | 13 | 8.3 | 5.7 | 7 | 12.9 | 8.5 | 0.1 | 9.8 | 9.6 | 12.9 | 14.9 | 14.6 | 14 | 10.7 | 15.6 | 24.7 | 17.6 | 13.2 | 13 | 21.2 | 38.3 | 0 | 36.5 | 0 | 22.7 | 21.9 | 22.4 | 20.8 | 16.6 | 27.5 |
| embryos 20-22 hr after egg laying | 0 | 0 | 0 | 0 | 0.9 | 1.3 | 3.5 | 0 | 3.7 | 4.5 | 3.6 | 2.7 | 2.8 | 5.1 | 3.7 | 0 | 4 | 4 | 4.9 | 4.4 | 4.4 | 4.2 | 3.9 | 6.8 | 9.3 | 7 | 5.8 | 5.7 | 8.6 | 15.9 | 0 | 15.3 | 0 | 10.7 | 12.1 | 12.7 | 9.4 | 8.9 | 12.8 |
| embryos 22-24 hr after egg laying | 0.1 | 0 | 0 | 0.2 | 1.4 | 2 | 4.4 | 0 | 6.4 | 7.2 | 4.4 | 4 | 4.5 | 7 | 4.5 | 0 | 4.2 | 5.2 | 8.1 | 8.1 | 8.2 | 8.1 | 7 | 9.6 | 11.9 | 10.6 | 9.6 | 9.6 | 15.2 | 24 | 0.6 | 22.2 | 0 | 17.2 | 18.7 | 19.4 | 17.7 | 18.7 | 23.9 |
| L1 stage larvae | 0 | 0 | 0 | 0 | 1.6 | 2.2 | 8.6 | 0.6 | 11.2 | 13.5 | 7.3 | 6.1 | 6.4 | 10 | 7.8 | 0.2 | 8.8 | 6.3 | 10.6 | 11.2 | 11.1 | 10.9 | 8 | 12.5 | 16.7 | 12.7 | 8.5 | 8.4 | 17.8 | 34.5 | 1 | 29.9 | 1.9 | 25 | 15 | 15.2 | 18.2 | 15.5 | 24.3 |
| L2 stage larvae | 0.1 | 0 | 0 | 0.3 | 2.8 | 4 | 9.4 | 0 | 13.3 | 14.5 | 8.6 | 8 | 8.7 | 13.4 | 9.1 | 0.3 | 10 | 9.9 | 13.8 | 16.4 | 16.4 | 16.2 | 11.3 | 18 | 23.1 | 17.2 | 15.5 | 15.5 | 24.6 | 45.3 | 0.6 | 37.9 | 0 | 27.4 | 24.2 | 24.9 | 28.5 | 27.7 | 34.7 |
| L3 stage larvae 12 hr post-molt | 0 | 0 | 0 | 0 | 2.8 | 4 | 10.3 | 0.6 | 11.9 | 15.2 | 9.7 | 7.4 | 8.3 | 12.3 | 8.9 | 0 | 11.1 | 8.4 | 12 | 11.9 | 11.7 | 11.3 | 10.2 | 13.8 | 17.3 | 12.2 | 11.4 | 11.4 | 16.7 | 29.1 | 0 | 26.8 | 0 | 21.1 | 15.7 | 15.6 | 17.8 | 16.6 | 22.7 |
| L3 stage larvae dark blue gut PS1-2 | 0 | 0 | 0 | 0 | 0.1 | 0.1 | 0.9 | 0 | 0.9 | 1.6 | 1.3 | 1 | 0.9 | 1.7 | 1 | 0 | 1.5 | 1.3 | 2 | 1.9 | 1.9 | 1.9 | 0.8 | 2.2 | 2.9 | 2.4 | 2.1 | 2.2 | 3.4 | 5.2 | 0 | 5.7 | 0 | 3.9 | 3.2 | 3.3 | 3.8 | 2.4 | 5.5 |
| L3 stage larvae light blue gut PS3-6 | 0 | 0 | 0 | 0 | 0.1 | 0.1 | 1 | 0 | 1.5 | 1.9 | 1.1 | 0.6 | 1 | 1.7 | 0.6 | 0 | 1.4 | 1.1 | 1.7 | 0.9 | 0.9 | 0.8 | 1.5 | 1.9 | 2.3 | 1.6 | 1.3 | 1.3 | 2.5 | 4.8 | 0 | 3.7 | 0 | 2 | 2.1 | 2.1 | 2.8 | 1.8 | 3.3 |
| L3 stage larvae clear gut PS 7-9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.5 | 0 | 0.1 | 0.2 | 0.1 | 0 | 0 | 0.5 | 0.1 | 0.5 | 0.5 | 0.5 | 0.4 | 0 | 0.6 | 0.9 | 0.4 | 0 | 0 | 0.8 | 2.2 | 0 | 1.6 | 0 | 0.9 | 0.9 | 0.9 | 1.1 | 1.1 | 1.9 |
| white prepupae WPP | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0.1 | 0.1 | 0 | 0 | 0 | 0.1 | 0.6 | 0 | 0.1 | 0 | 0.3 | 0.5 | 0.7 | 0.1 | 0 | 0.7 |
| WPP + 12 hr | 0 | 0 | 0 | 0 | 0 | 0 | 0.5 | 0 | 1.3 | 1.2 | 0.6 | 0.5 | 0.3 | 0.9 | 0.5 | 0 | 0 | 0.5 | 1 | 0.9 | 0.9 | 0.9 | 0.8 | 1.5 | 1.4 | 1.2 | 1.3 | 1.3 | 1.8 | 3.7 | 0 | 3 | 0 | 2.2 | 2.5 | 2.8 | 3 | 3.1 | 3.7 |
| WPP + 24 hr | 0 | 0 | 0 | 0 | 0.4 | 0.6 | 1.7 | 0 | 3.7 | 3.2 | 1.7 | 0.7 | 1.3 | 2.3 | 0.8 | 0.9 | 1.6 | 1.8 | 2.8 | 2.8 | 3 | 3.2 | 2.8 | 3.9 | 4.3 | 4.6 | 2.9 | 3 | 5.5 | 8.5 | 0.6 | 9.2 | 0 | 5.9 | 5.7 | 6.7 | 5.4 | 5.3 | 9.1 |
| pupae WPP + 2 days | 0.1 | 0 | 0 | 0.2 | 1.2 | 1.7 | 4.4 | 0 | 7.7 | 6.4 | 5.3 | 4.2 | 5.2 | 8.7 | 3.9 | 3.2 | 6.1 | 6.5 | 9.1 | 8.8 | 9.4 | 9.9 | 8.7 | 12.3 | 14.2 | 12.1 | 11.4 | 11.8 | 17.4 | 30.6 | 2.8 | 26.2 | 1.4 | 19.9 | 15.8 | 18.5 | 20.6 | 20.4 | 30.3 |
| pupae WPP + 3 days | 1.5 | 0.3 | 0.3 | 2.5 | 9.1 | 12.8 | 30.7 | 0.5 | 44.9 | 43.3 | 32.4 | 31.7 | 31.2 | 43.1 | 22.7 | 10.3 | 27.9 | 33.3 | 45.7 | 39.9 | 43.6 | 46.5 | 40.7 | 48.4 | 49 | 49.4 | 47.8 | 49.5 | 49.9 | 49.5 | 11.2 | 49.8 | 2 | 49.8 | 42.3 | 49.5 | 49.9 | 49.8 | 49 |
| pupae WPP + 4 days | 0.1 | 0 | 0 | 0.3 | 3 | 4.3 | 16.1 | 0 | 23.9 | 25 | 12.3 | 11.4 | 10.6 | 15.7 | 9 | 3.4 | 13 | 11.9 | 17.9 | 13 | 14.1 | 15 | 14.7 | 24.1 | 34.3 | 28.7 | 16.8 | 17.3 | 33.8 | 49.5 | 2.7 | 49.8 | 1.1 | 44.3 | 22.6 | 26.7 | 34.3 | 27.4 | 38.6 |
| adult male eclosion + 1 day | 0.4 | 0.1 | 0 | 0.7 | 4.5 | 6.3 | 21.3 | 0 | 25.9 | 25.4 | 17.5 | 15.2 | 14.9 | 23.8 | 5.1 | 7.3 | 16.3 | 18 | 22.6 | 20.6 | 22.6 | 24.3 | 20.8 | 29.6 | 35.5 | 31 | 25.1 | 25.8 | 35.8 | 49.5 | 2.4 | 49 | 0.9 | 42.2 | 31.3 | 37.3 | 36.1 | 35.8 | 39.4 |
| adult male eclosion + 5 days | 0.5 | 0.1 | 0.1 | 0.9 | 4.7 | 6.6 | 18.6 | 0 | 17.7 | 23.2 | 14.7 | 12 | 12.6 | 19.1 | 4 | 6.6 | 15.3 | 14.7 | 20.4 | 16.2 | 17.5 | 18.6 | 18.7 | 26.1 | 32.3 | 24.2 | 22.1 | 22.8 | 30 | 46.8 | 2.5 | 45.5 | 3.9 | 37 | 22.2 | 26 | 30.6 | 25.6 | 36.3 |
| adult male eclosion + 30 days | 0 | 0 | 0 | 0 | 2.9 | 4.1 | 13.6 | 1.4 | 22.2 | 22.3 | 10.9 | 10.2 | 9.6 | 14.2 | 3 | 4.7 | 10.2 | 9.5 | 15.5 | 13.5 | 14.3 | 14.9 | 13.3 | 20.6 | 28.7 | 23.2 | 12.8 | 13.1 | 27.3 | 46.1 | 1.8 | 47 | 2.9 | 37.7 | 17.4 | 20.3 | 26 | 19.6 | 32.1 |
| adult female eclosion + 1 day | 0 | 0 | 0 | 0 | 2.2 | 3.2 | 13.6 | 0 | 20.1 | 21.8 | 9.4 | 7.9 | 8.4 | 12.8 | 4.8 | 3.2 | 10.3 | 8.5 | 13.4 | 11.3 | 12.4 | 13.3 | 12.1 | 16.7 | 24.2 | 17.8 | 10.6 | 10.9 | 24.8 | 48.6 | 0.9 | 46.9 | 1.9 | 36.8 | 15.7 | 18.6 | 24.2 | 18.4 | 32 |
| adult female eclosion + 5 days | 0 | 0 | 0 | 0 | 0 | 0 | 0.6 | 0 | 0.9 | 1.1 | 0.8 | 0.2 | 0.6 | 1 | 0 | 0 | 0.5 | 0.5 | 1.2 | 0.6 | 0.7 | 0.8 | 0.9 | 1.8 | 1.8 | 1.8 | 1.5 | 1.6 | 2.6 | 3.5 | 0 | 4.1 | 0 | 3 | 1.6 | 2 | 3.3 | 3.2 | 3.9 |
| adult female eclosion + 30 days | 0 | 0 | 0 | 0 | 0.3 | 0.5 | 1.3 | 0 | 1.7 | 1.8 | 0.8 | 0.9 | 0.9 | 1.3 | 0.3 | 0.1 | 1.2 | 1.1 | 1.4 | 1.2 | 1.3 | 1.4 | 1.1 | 1.9 | 2 | 1.8 | 1.1 | 1.2 | 2.3 | 3.8 | 0 | 3.5 | 0 | 3.8 | 2.2 | 2.7 | 2.7 | 2.3 | 3.5 |