Cytology	Observed or estimated sequence coordinates	Symbol	Stocks


*Genes (mapped to the sequence)* [Export into hitlist]
51A1-51A2	2R:14409295..14411572	CG17385	8 stocks
51A2-51A2	2R:14411825..14413851	Sin1	7 stocks
51A2-51A2	2R:14420324..14424764	Achl	5 stocks
51A2-51A2,51A1-51A2,51A1-51A5,51A1-51A2	2R:14427336..14432337	phyl	11 stocks
51A2-51A2	2R:14433430..14433895	lncRNA:CR45277
51A2-51A4,51A1-51A2,51A1-51A2	2R:14435899..14465881	L	119 stocks

*Genes (mapped, but not to the sequence)* [Export into hitlist]
41-60	2R:4460915..25255318	l(2)cl-R11	3 stocks
50A-51B	2R:13275887..14707858	limber
50C-59B	2R:13663924..22978008	l(2)4-3A
50F6-51B4	2R:14348558..14598910	mat(2)ea-A	2 stocks
51-51	2R:14389492..15402599	oho51
51A-51A	2R:14389492..14547366	smi51A
51A2-51B6	2R:14410617..14635394	auk	2 stocks

*Insertions (cytology mapped)* [Export into hitlist]
41--60	2R:4460915..25255318	P{Rac1[+t3.6]}1.7.2	FBst0006683
51-51	2R:14389492..15402599	P{3.8S-Y}15
51A-51A	2R:14389492..14547366	P{arm-lacZ.V}JPV2
51A-51A	2R:14389492..14547366	P{lacW}Sec61β[k17010b]
51A-51A	2R:14389492..14547366	P{Sgs4-2.5}A1
51A1-51A5	2R:14389492..14509675	P{lacW}Tfb1[k06203]	2 stocks
51A1-51A2	2R:14389492..14445271	P{PZ}00406b
51A1-51A2	2R:14389492..14445271	P{PZ}Tfb1[06950]
51A1-51A2	2R:14389492..14445271	P{PZ}Tfb1[rO238]
51A2-51A2	2R:14410617..14445271	TI{TI}phyl[GFP]
51A2-51A2	2R:14410617..14445271	TI{RFP(Unk)}phyl[RFP.NLS]

*Insertions (sequence mapped)* [Export into hitlist]
51A2	2R:14412385..14412385	PBac{RB}Sin1[e03756]	FBst0018188
51A2	2R:14416240..14416240	Mi{MIC}MI01952
51A2	2R:14420151..14420151	P{UASp-YFP.Rab35}15	FBst0009821
51A2-51A2	2R:14420188..14420331	P{GawB}NP4297	FBst0303528
51A1	2R:14420284..14420284	P{SUPor-P}KG04043	FBst0013514
51A2	2R:14431668..14431668	PBac{HpaI-GFP.A}phyl[YD0076]
51A2	2R:14432350..14432350	P{GSV6}GS9419	FBst0309776
51A2	2R:14432350..14432350	P{EP}phyl[G18270]	FBst0028102
51A2	2R:14438252..14438252	PBac{WH}f04268

*Deleted segments (sequence mapped)* [Export into hitlist]
50E6--51B1	2R:14259045..14574557	Df(2R)ED2354	2 stocks
50E6--51A2	2R:14265801..14412385	Df(2R)BSC700	FBst0026552
50F6--51C1	2R:14363886..14713687	Df(2R)BSC357	FBst0024381
51A2--51C1	2R:14438252..14713686	Df(2R)BSC668	FBst0026520

*Duplicated segments (sequence mapped)* [Export into hitlist]
50F6-51A3	2R:14373178..14454239	Dp(2;3)GV-CH321-46E14	FBst0089931
51A2-51A8	2R:14439452..14538879	Dp(2;3)GV-CH321-10I02	FBst0090107

*Deleted segments (cytology mapped)* [Export into hitlist]
50D--51C2	2R:13994732..14796262	Df(2R)L7
50E6--51E4	2R:14245564..15176278	Df(2R)BSC11	2 stocks
50F6--51B3	2R:14348558..14582364	Df(2R)L48	2 stocks
51A1--51B6	2R:14389492..14635394	Df(2R)4670
51A1--51A5	2R:14389492..14509675	Df(2R)ΔP1201
51A2--52B1	2R:14410617..15612267	Df(2R)L4
51A2--51B6	2R:14410617..14635394	Df(2R)trix	3 stocks
51A2--51A2	2R:14410617..14445271	Df(2R)3072r

*Duplicated segments (cytology mapped)* [Export into hitlist]
41A1--60D	2R:4460915..24747488	Dp(2;Y)cb25-11
42A--60D	2R:5802900..24747488	Dp(2;Y)cb25-9
42A--55E	2R:5802900..18750945	Dp(2;2)SMG45
45--51C	2R:8985488..14872152	Dp(2;2)vg-D.fg
48F--51E	2R:12240145..15265242	Dp(2;2)bw-NS
49B1--51C1	2R:12530888..14752221	Dp(2;2)vg-D.fk
50F--54B	2R:14289892..17507339	Dp(2;2)M7

*Inversion breakpoints (cytology mapped)* [Export into hitlist]
41-60A	2R:4460915..23989883	In(F2R)217
41-59F	2R:4460915..23787158	In(2R)41;59F
41-59D	2R:4460915..23434601	In(2R)bw[A]
41A-59D	2R:4460915..23434601	In(2R)bw[VI]
41-58B	2R:4460915..22128418	In(F2R)153
41-57C7	2R:4460915..21179828	In(2R)Pu[K]
41-57A	2R:4460915..20683849	In(2R)C92
41A-57A	2R:4460915..20683849	In(2R)102
41-56E	2R:4460915..19971053	In(2R)41;56E
41-53E	2R:4460915..17039162	In(F2R)241
41-53D	2R:4460915..16882421	In(2R)B2
41A-51F	2R:4460915..15402599	In(2R)Dem1-5
41C-57B	2R:4704667..21107330	In(2R)C2
41F-52C	2R:5405811..15890253	In(2R)B208
41F-52A	2R:5405811..15578985	In(2R)Dem2-2
42A-60B	2R:5802900..24156611	In(2R)Mg109
42A-60A	2R:5802900..23989883	In(2R)PS19
42A-57F	2R:5802900..21758515	In(2R)KA
42A-57F	2R:5802900..21758515	In(2R)40
42A-57C	2R:5802900..21199299	In(2R)K3
42A-53C	2R:5802900..16667220	In(2R)Dem2-3
42B-58A	2R:6496636..21978058	In(F2R)39
42D-60F	2R:6776963..25255318	In(2R)PS20
42E-56B	2R:6908323..19156660	In(2LR)A8176b
42E-55E	2R:6908323..18750945	In(2R)K14
43A-54E	2R:7180674..17811908	In(2R)Mg105
43-53	2R:7180674..17132869	In(2R)SD72-240
43A-52F	2R:7180674..16231534	In(2R)RBR13
43B-53E	2R:7333731..17039162	In(2R)43B;53E
43C-56F	2R:7428109..20361757	In(2R)B1
43E-60B	2R:7571523..24156611	In(2R)Mg108
43E15-56D2	2R:7756730..19386821	In(2R)cn79b8
43F-56E	2R:7861514..19971053	In(2R)C129
43F-54B	2R:7861514..17507339	In(2R)RBR145
44A-53D	2R:7972698..16882421	In(2R)L5
44B-57C	2R:8111491..21199299	In(2R)RBR24
44B-51F	2R:8111491..15402599	In(2R)Alt-2
44C-57E	2R:8185882..21549017	In(2R)St-M
44C-54B	2R:8185882..17507339	In(2R)cn10
44D-51C	2R:8436437..14872152	In(F2R)183
44E-56B	2R:8660245..19156660	In(2R)ena[GC5]
44E-53F	2R:8660245..17132869	In(2R)Be
44F-51A	2R:8783087..14547366	In(2R)44F;51A
45B-53A	2R:9153345..16285583	In(F2R)26
45C-58A	2R:9250251..21978058	In(F2R)284
45C-52C	2R:9250251..15890253	In(2R)45C-52C
45D-58E	2R:9344687..22584651	In(2LR)A8158
45D-58E	2R:9344687..22584651	In(2LR)A81815
45D-57B	2R:9344687..21107330	In(2LR)A8128
45D-55F	2R:9344687..18927715	In(2R)IW20
45D-54F	2R:9344687..17890759	In(F2R)34
45E-56B	2R:9465234..19156660	In(2R)Mg102
46A-57F	2R:9637539..21758515	In(2R)12
47C-54D	2R:10799366..17701490	In(2R)PS23
47E-58E	2R:11220955..22584651	In(2LR)A8164b
47E-55E	2R:11220955..18750945	In(2R)PS24
47F-60A	2R:11287019..23989883	In(2R)Z5
48A-56A	2R:11527783..19012906	In(2R)IE
48A-52E	2R:11527783..16150095	In(F2R)255
48A3-59C3	2R:11580032..23098521	In(2R)SD1[rv1]
48B-53F	2R:11631876..17132869	In(2R)K24
48F-51F	2R:12240145..15402599	In(2R)IC
48F-51C	2R:12240145..14872152	In(F2R)283
49A-51D	2R:12345604..15093453	In(2R)St-D
49B-60B	2R:12530888..24156611	In(2R)St-B
49B-56C	2R:12530888..19329544	In(2R)RBR148
49B-56B	2R:12530888..19156660	In(2R)AL7
49B-56A	2R:12530888..19012906	In(2R)Au
49B-51D	2R:12530888..15093453	In(2R)St-O
49C-56A	2R:12690973..19012906	In(2R)IB
49D4-60F1	2R:12825913..25044553	In(2R)vg[88e28]
49D4-60B12	2R:12825913..24144090	In(2R)vg[87g43]
49D4-59D	2R:12825913..23434601	In(2R)vg[83f38]
49D4-59D4	2R:12825913..23285389	In(2R)vg[78k3]
49D4-56E	2R:12825913..19971053	In(2R)vg[78a2]
49D4-54C4	2R:12825913..17550360	In(2R)vg[88f18]
49D4-52A11	2R:12825913..15562398	In(2R)vg[89e4]
49D4-51D2	2R:12825913..14928493	In(2R)vg[83b39]
49E-57E	2R:12883887..21549017	In(2R)RBR93
49E-56C	2R:12883887..19329544	In(2R)PA
49E-52F	2R:12883887..16231534	In(2R)Mg106
49F-51D	2R:13024827..15093453	In(2R)St-N
50A-60B	2R:13275887..24156611	In(2R)AWI4
50A-57B	2R:13275887..21107330	In(2R)RBR31-2
50A-54B	2R:13275887..17507339	In(2R)St-K
50A-53A	2R:13275887..16285583	In(2R)TA
50B-57A	2R:13523467..20683849	In(2R)PB
50B-56B	2R:13523467..19156660	In(2R)88c83
50B-55B	2R:13523467..18216698	In(2R)K
50C-57C	2R:13663924..21199299	In(2R)JHI3
50C-54A	2R:13663924..17227747	In(2R)Dem2-4
50C11-56C9	2R:13954019..19306690	In(2R)85e4
50F-56C	2R:14289892..19329544	In(2R)RBR69
50F-54B	2R:14289892..17507339	In(2R)cn13
50F-54B	2R:14289892..17507339	In(2R)St-H
50F-53D	2R:14289892..16882421	In(2R)AL8
51A-53F	2R:14389492..17132869	In(2R)K22

*Transposition and translocation breakpoints (cytology mapped)* [Export into hitlist]
41-100	2R:4460915..32068446	T(2;3)E(SD)1
41-98F	2R:4460915..29184631	T(2;3)L141-50
41A-98C	2R:4460915..28383802	T(2;3)Dem1-19
41-97D	2R:4460915..27054991	T(F2R;3)172
41-80	2R:4460915..23856407	T(2;3)L141-41
41A-94B	2R:4460915..22666854	T(2;3)Dem2-2
41-93E	2R:4460915..21645979	T(2;3)C199
41-92E14	2R:4460915..20522671	T(2;3)H[24]
41-89E	2R:4460915..17123622	T(2;3)P58
41-89E3	2R:4460915..16902970	T(2;3)iab9[65]
41-89D	2R:4460915..16736155	T(2;3)205
41-89B	2R:4460915..16576178	T(2;3)D24,D18#1
41C-75B	2R:4704667..18155271	T(2;3)V116
42A-96E	2R:5802900..25712016	T(2;3)C5
42F-100F	2R:7078092..32068446	T(2;3)CA15
43-93	2R:7180674..22019295	T(2;3)D7
43D5-75C4	2R:7549958..18378383	T(2;3)L141-28
43E8-75C2	2R:7657576..18262608	T(2;3)MV
43E15-98A12	2R:7756730..27635789	T(2;3)cn74c7
43E15-70F	2R:7756730..14827714	T(2;3)cn88f29
43F-92D	2R:7861514..20259177	T(2;3)C29
44D-92A	2R:8436437..19695282	T(F2R;3)222
44F-99B	2R:8783087..29775722	T(2;3)Mg175
45C-98A	2R:9250251..27670954	T(2;3)14h
45F-94C	2R:9534678..22827295	T(2;3)A81115
45F-74B	2R:9534678..17429272	T(2;3)Mg182
47D-93B	2R:10977101..21124232	T(2;3)Mg51
48A3-96C	2R:11580032..25292351	T(2;3)en[LA3]
48A3-79F	2R:11580032..22718905	T(2;3)en[SF24]
49A-98B	2R:12345604..28082526	T(2;3)Hin111
49A-80A	2R:12345604..22843488	T(2;3)6r6
49D4-96C2	2R:12825913..25173390	T(2;3)vg88d9
49D4-80C2	2R:12825913..23005626	T(2;3)vg[88f31]
49E-92E	2R:12883887..20525400	T(2;3)Mg187
50D1-79A	2R:13994732..22007689	T(2;3)ML307
50D-89E3	2R:13994732..16902970	T(2;3)Tab[rv185]
50E-72C	2R:14135802..16027777	T(2;3)Mg196
51A-80C	2R:14389492..23077120	T(2;3)L141-18